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FFCP PHASE1:Mm9::chr7:5008308..5008343,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232821
|EntrezGene=232821
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3Z4F1,Q3ULM0
|UniProt=D3Z4F1,Q3ULM0
|association_with_transcript=0bp_to_ENSMUST00000144802,ENSMUST00000149912,NM_146178,uc009ezr.2,uc009ezs.2_5end
|association_with_transcript=0bp_to_ENSMUST00000144802,ENSMUST00000149912,NM_146178,uc009ezr.2,uc009ezs.2_5end
|cluster_id=chr7:5008308..5008343,+
|description=CAGE_peak_1_at_Ccdc106_5end
|description=CAGE_peak_1_at_Ccdc106_5end
|id=chr7:5008308..5008343,+
|id=chr7:5008308..5008343,+
|ontology_enrichment_celltype=CL:0000117!9.80e-14!23;CL:0000337!9.80e-14!23;CL:0000540!1.30e-10!33;CL:0000047!1.30e-10!33;CL:0000031!1.30e-10!33;CL:0000404!1.30e-10!33;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!1.87e-09!43;CL:0000393!2.75e-07!39;CL:0000211!2.75e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-16,23;CL:0000337,5.92e-16,23;CL:0000540,1.56e-09,33;CL:0000047,1.56e-09,33;CL:0000031,1.56e-09,33;CL:0000404,1.56e-09,33;CL:0000221,6.64e-08,44;CL:0000133,6.64e-08,44;CL:0002319,7.18e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.50e-28!73;UBERON:0005743!4.50e-28!73;UBERON:0000033!1.02e-26!63;UBERON:0001049!1.11e-26!52;UBERON:0005068!1.11e-26!52;UBERON:0006241!1.11e-26!52;UBERON:0007135!1.11e-26!52;UBERON:0002346!2.28e-26!71;UBERON:0003075!2.28e-26!71;UBERON:0007284!2.28e-26!71;UBERON:0000073!3.43e-26!75;UBERON:0001016!3.43e-26!75;UBERON:0000955!1.13e-25!50;UBERON:0006238!1.13e-25!50;UBERON:0004121!4.75e-25!102;UBERON:0000924!4.75e-25!102;UBERON:0006601!4.75e-25!102;UBERON:0002616!7.14e-25!49;UBERON:0003056!9.93e-23!49;UBERON:0003080!3.43e-21!40;UBERON:0002780!1.13e-20!39;UBERON:0001890!1.13e-20!39;UBERON:0006240!1.13e-20!39;UBERON:0002020!1.51e-19!34;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0000153!6.32e-14!94;UBERON:0007811!9.52e-12!86;UBERON:0000956!3.76e-11!21;UBERON:0001869!3.76e-11!21;UBERON:0000203!3.76e-11!21;UBERON:0002619!1.42e-09!17;UBERON:0000468!3.82e-08!333;UBERON:0002021!3.45e-07!10;UBERON:0000411!3.45e-07!10;UBERON:0001950!3.45e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-32,54;UBERON:0001049,1.53e-30,52;UBERON:0005068,1.53e-30,52;UBERON:0006241,1.53e-30,52;UBERON:0007135,1.53e-30,52;UBERON:0002346,3.37e-30,64;UBERON:0003075,3.37e-30,64;UBERON:0007284,3.37e-30,64;UBERON:0001017,9.43e-28,73;UBERON:0010371,1.22e-27,73;UBERON:0000955,6.14e-27,47;UBERON:0006238,6.14e-27,47;UBERON:0001016,2.93e-26,75;UBERON:0003056,4.16e-26,49;UBERON:0002616,5.18e-26,46;UBERON:0004121,2.86e-25,95;UBERON:0000924,2.86e-25,95;UBERON:0006601,2.86e-25,95;UBERON:0003080,8.88e-25,40;UBERON:0002780,3.65e-24,39;UBERON:0001890,3.65e-24,39;UBERON:0006240,3.65e-24,39;UBERON:0002020,7.85e-23,34;UBERON:0003528,5.67e-19,29;UBERON:0002791,5.67e-19,29;UBERON:0001893,5.67e-19,29;UBERON:0010314,2.47e-15,92;UBERON:0000956,6.72e-13,21;UBERON:0001869,6.72e-13,21;UBERON:0000203,6.72e-13,21;UBERON:0002619,4.91e-11,17;UBERON:0002021,3.21e-08,10;UBERON:0000411,3.21e-08,10;UBERON:0001950,3.21e-08,10;UBERON:0002420,2.39e-07,8;UBERON:0007245,2.39e-07,8;UBERON:0010009,2.39e-07,8;UBERON:0010011,2.39e-07,8;UBERON:0000454,2.39e-07,8
|phase1_expression=3.36312578920067,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0.782391344348039,2.61630187656536,3.73466510648602,1.55543919259427,0.979904951377538,0,0,0,0,0,0,0,6.67644320836673,10.0508286061686,6.33831403506179,1.0165335962074,0,0,0,0,0.898800331555214,5.37905627450176,2.38486108309499,4.18518408828241,2.73422449756797,9.42648248532552,7.73039893330647,3.06226998037385,2.39613677545591,4.5960939330501,7.70811166995721,7.2781782708557,5.68344173048101,7.51751840062105,5.58074625974699,13.5437476344758,5.862842979029,9.56696437053856,4.88954392885792,6.77645746589436,5.83723891276322,5.77838282058432,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.90833859442749,0.608930956624282,0.922461989024234,0.150722640552623,0.705532242814229,0.376999773989026,0,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,2.34224637609238,3.35114730901528,0,0,0,0,4.79330046095433,10.0650132620098,9.1727677042391,6.43149984711423,7.92717917724025,6.02585329222724,6.32740925964255,2.44414473240759,0.497627882440372,0.758168275301024,0.420883711772948,2.08192708740326,3.21862946206862,2.70093194708024,1.9591626318643,2.9255694635071,1.92170580427275,1.96773621575431,1.81092359517311,1.5089759505299,3.78212160335639,6.68614271823006,6.35667624039967,5.28289773528636,3.48252166522167,2.26360350048738,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,6.09840850835969,5.24813523134351,0,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,1.00841762311671,1.11189021922435,1.71203063501303,0,1.64698954724011,1.00534083520108,1.39269530428806,0.38992817423824,0,0.216138049874694,0.398282546508734,2.27601481143698,3.08470984046268,2.25415471346161,2.64746726198909,1.93952487167626,1.8936671370386,2.15004226222475,0.590440591918409,0.31399745568275,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,2.27389694124582,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0.551873492609465,3.21101179975584,4.45404409050372,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,10.2822821254978,0.99358059645788,5.69809931735217,3.4206261464251,1.31976098378028,0,0.242780636154981,1.51161778482376,0.565815239267694,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,5.44703369206061,2.70091641046965,3.49268446213437,3.42939256050548,1.77340233642274,5.17269571046005,2.30368628842969,5.78483403317739,0,0,0.441056796109924,0.49465875882444,1.61464426695906,1.38719727334758,1.43246812803764,0.328281799490123,0.874442509889552,2.78137953015765,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,3.02414954301044,2.09088296014469,3.05707589244649,1.88810084938749,2.0663363931334,0,1.03691978633434,1.24267862617385,1.69107881605257,1.19613236835183,1.48912641411388,1.75006069509643,1.80823752868824,2.19642963138012,1.5256441023948,1.0416350787516,0.943734099831398,1.20792060413003,0.288030006257865,0,1.21635129174099,0.718976700153791,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.503653849092235,0.386379188064381,0,2.74727436400898,0.857473516316263,0.501572104035363,3.3885110557024,5.9842280745933,9.16632821503035,10.3111909406213,8.22099023724771,5.2877572817279,6.07520250208625,8.55610286126019,3.62513927187364,6.73088405277366,1.14166082342594,3.99024873401031,4.95127456686989,3.16038732188782,3.35381060204772,1.83843508450014,1.33348036680969,1.64828045791115,1.60459604795908,2.77966932940177,1.01391719956096,0.943131706930381,1.87283014939765,1.6646539625266,2.1825478203133,3.81034953026459,2.66533949673168,1.54327376370964,2.06042950401653,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.74415699958794,1.88218760830661,2.28459441307527,1.28049581010941,1.05227884575137,1.7654534799962,2.80571135828869,1.77952527186261,1.97008964751127,2.04615521584845,1.39443157067369,1.73615949883027,1.74867404556562,2.8071793013449,0.859484216193193,1.14772999241306,0.441182838239031,0.231867835620421
|phase1_expression=3.36312578920067,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0.782391344348039,2.61630187656536,3.73466510648602,1.55543919259427,0.979904951377538,0,0,0,0,0,0,0,6.67644320836673,10.0508286061686,6.33831403506179,1.0165335962074,0,0,0,0,0.898800331555214,5.37905627450176,2.38486108309499,4.18518408828241,2.73422449756797,9.42648248532552,7.73039893330647,3.06226998037385,2.39613677545591,4.5960939330501,7.70811166995721,7.2781782708557,5.68344173048101,7.51751840062105,5.58074625974699,13.5437476344758,5.862842979029,9.56696437053856,4.88954392885792,6.77645746589436,5.83723891276322,5.77838282058432,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.90833859442749,0.608930956624282,0.922461989024234,0.150722640552623,0.705532242814229,0.376999773989026,0,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,2.34224637609238,3.35114730901528,0,0,0,0,4.79330046095433,10.0650132620098,9.1727677042391,6.43149984711423,7.92717917724025,6.02585329222724,6.32740925964255,2.44414473240759,0.497627882440372,0.758168275301024,0.420883711772948,2.08192708740326,3.21862946206862,2.70093194708024,1.9591626318643,2.9255694635071,1.92170580427275,1.96773621575431,1.81092359517311,1.5089759505299,3.78212160335639,6.68614271823006,6.35667624039967,5.28289773528636,3.48252166522167,2.26360350048738,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,6.09840850835969,5.24813523134351,0,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,1.00841762311671,1.11189021922435,1.71203063501303,0,1.64698954724011,1.00534083520108,1.39269530428806,0.38992817423824,0,0.216138049874694,0.398282546508734,2.27601481143698,3.08470984046268,2.25415471346161,2.64746726198909,1.93952487167626,1.8936671370386,2.15004226222475,0.590440591918409,0.31399745568275,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,2.27389694124582,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0.551873492609465,3.21101179975584,4.45404409050372,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,10.2822821254978,0.99358059645788,5.69809931735217,3.4206261464251,1.31976098378028,0,0.242780636154981,1.51161778482376,0.565815239267694,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,5.44703369206061,2.70091641046965,3.49268446213437,3.42939256050548,1.77340233642274,5.17269571046005,2.30368628842969,5.78483403317739,0,0,0.441056796109924,0.49465875882444,1.61464426695906,1.38719727334758,1.43246812803764,0.328281799490123,0.874442509889552,2.78137953015765,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,3.02414954301044,2.09088296014469,3.05707589244649,1.88810084938749,2.0663363931334,0,1.03691978633434,1.24267862617385,1.69107881605257,1.19613236835183,1.48912641411388,1.75006069509643,1.80823752868824,2.19642963138012,1.5256441023948,1.0416350787516,0.943734099831398,1.20792060413003,0.288030006257865,0,1.21635129174099,0.718976700153791,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.503653849092235,0.386379188064381,0,2.74727436400898,0.857473516316263,0.501572104035363,3.3885110557024,5.9842280745933,9.16632821503035,10.3111909406213,8.22099023724771,5.2877572817279,6.07520250208625,8.55610286126019,3.62513927187364,6.73088405277366,1.14166082342594,3.99024873401031,4.95127456686989,3.16038732188782,3.35381060204772,1.83843508450014,1.33348036680969,1.64828045791115,1.60459604795908,2.77966932940177,1.01391719956096,0.943131706930381,1.87283014939765,1.6646539625266,2.1825478203133,3.81034953026459,2.66533949673168,1.54327376370964,2.06042950401653,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.74415699958794,1.88218760830661,2.28459441307527,1.28049581010941,1.05227884575137,1.7654534799962,2.80571135828869,1.77952527186261,1.97008964751127,2.04615521584845,1.39443157067369,1.73615949883027,1.74867404556562,2.8071793013449,0.859484216193193,1.14772999241306,0.441182838239031,0.231867835620421
|short_description=p1@Ccdc106
|short_description=p1@Ccdc106
}}
}}

Latest revision as of 18:17, 26 September 2015

Short description:p1@Ccdc106
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc106_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000144802, ENSMUST00000149912, NM_146178, uc009ezr.2, uc009ezs.2_5end
EntrezGene:Ccdc106
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Ccdc106

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.92e-1623
neuroblast (sensu Vertebrata)5.92e-1623
neuron1.56e-0933
neuronal stem cell1.56e-0933
neuroblast1.56e-0933
electrically signaling cell1.56e-0933
ectodermal cell6.64e-0844
neurectodermal cell6.64e-0844
neural cell7.18e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.44e-3254
neural tube1.53e-3052
neural rod1.53e-3052
future spinal cord1.53e-3052
neural keel1.53e-3052
neurectoderm3.37e-3064
neural plate3.37e-3064
presumptive neural plate3.37e-3064
central nervous system9.43e-2873
ecto-epithelium1.22e-2773
brain6.14e-2747
future brain6.14e-2747
nervous system2.93e-2675
pre-chordal neural plate4.16e-2649
regional part of brain5.18e-2646
ectoderm-derived structure2.86e-2595
ectoderm2.86e-2595
presumptive ectoderm2.86e-2595
anterior neural tube8.88e-2540
regional part of forebrain3.65e-2439
forebrain3.65e-2439
future forebrain3.65e-2439
gray matter7.85e-2334
brain grey matter5.67e-1929
regional part of telencephalon5.67e-1929
telencephalon5.67e-1929
structure with developmental contribution from neural crest2.47e-1592
cerebral cortex6.72e-1321
cerebral hemisphere6.72e-1321
pallium6.72e-1321
regional part of cerebral cortex4.91e-1117
occipital lobe3.21e-0810
visual cortex3.21e-0810
neocortex3.21e-0810
basal ganglion2.39e-078
nuclear complex of neuraxis2.39e-078
aggregate regional part of brain2.39e-078
collection of basal ganglia2.39e-078
cerebral subcortex2.39e-078
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