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FFCP PHASE1:Mm9::chr9:4796141..4796159,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|association_with_transcript=74bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|association_with_transcript=74bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|cluster_id=chr9:4796141..4796159,-
|description=CAGE_peak_6_at_Gria4_5end
|description=CAGE_peak_6_at_Gria4_5end
|id=chr9:4796141..4796159,-
|id=chr9:4796141..4796159,-
|ontology_enrichment_celltype=CL:0000540!6.31e-18!33;CL:0000047!6.31e-18!33;CL:0000031!6.31e-18!33;CL:0000404!6.31e-18!33;CL:0000393!2.17e-17!39;CL:0000211!2.17e-17!39;CL:0000221!1.22e-11!44;CL:0000133!1.22e-11!44;CL:0002319!3.37e-11!43;CL:0000055!7.61e-11!50;CL:0000117!7.72e-11!23;CL:0000337!7.72e-11!23;CL:0000107!2.28e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,7.83e-28,33;CL:0000047,7.83e-28,33;CL:0000031,7.83e-28,33;CL:0000404,7.83e-28,33;CL:0000393,9.30e-24,39;CL:0000211,9.30e-24,39;CL:0000221,4.04e-20,44;CL:0000133,4.04e-20,44;CL:0002319,2.72e-19,43;CL:0000117,1.99e-16,23;CL:0000337,1.99e-16,23;CL:0000107,2.41e-14,9;CL:0002321,2.96e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.34e-26!73;UBERON:0005743!2.34e-26!73;UBERON:0000073!2.28e-25!75;UBERON:0001016!2.28e-25!75;UBERON:0004121!8.25e-25!102;UBERON:0000924!8.25e-25!102;UBERON:0006601!8.25e-25!102;UBERON:0002346!4.83e-23!71;UBERON:0003075!4.83e-23!71;UBERON:0007284!4.83e-23!71;UBERON:0000033!3.21e-18!63;UBERON:0001049!5.01e-18!52;UBERON:0005068!5.01e-18!52;UBERON:0006241!5.01e-18!52;UBERON:0007135!5.01e-18!52;UBERON:0000955!4.85e-17!50;UBERON:0006238!4.85e-17!50;UBERON:0002616!2.45e-16!49;UBERON:0002020!4.03e-15!34;UBERON:0003056!4.01e-14!49;UBERON:0003080!4.34e-13!40;UBERON:0002780!1.75e-12!39;UBERON:0001890!1.75e-12!39;UBERON:0006240!1.75e-12!39;UBERON:0002791!5.04e-12!29;UBERON:0003528!5.04e-12!29;UBERON:0001893!5.04e-12!29;UBERON:0002410!2.28e-08!9;UBERON:0000956!3.95e-08!21;UBERON:0001869!3.95e-08!21;UBERON:0000203!3.95e-08!21;UBERON:0007811!6.92e-08!86;UBERON:0002619!1.91e-07!17;UBERON:0002021!3.14e-07!10;UBERON:0000411!3.14e-07!10;UBERON:0001950!3.14e-07!10;UBERON:0000153!3.29e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.22e-44,73;UBERON:0001016,2.34e-42,75;UBERON:0004121,1.87e-37,95;UBERON:0000924,1.87e-37,95;UBERON:0006601,1.87e-37,95;UBERON:0002346,1.38e-32,64;UBERON:0003075,1.38e-32,64;UBERON:0007284,1.38e-32,64;UBERON:0000073,3.75e-31,54;UBERON:0001049,1.87e-28,52;UBERON:0005068,1.87e-28,52;UBERON:0006241,1.87e-28,52;UBERON:0007135,1.87e-28,52;UBERON:0010371,2.20e-28,73;UBERON:0002020,8.84e-24,34;UBERON:0000955,6.70e-23,47;UBERON:0006238,6.70e-23,47;UBERON:0002616,1.09e-21,46;UBERON:0010314,7.92e-21,92;UBERON:0003056,1.47e-18,49;UBERON:0003080,1.93e-18,40;UBERON:0003528,3.79e-18,29;UBERON:0002791,3.79e-18,29;UBERON:0001893,3.79e-18,29;UBERON:0002780,2.19e-17,39;UBERON:0001890,2.19e-17,39;UBERON:0006240,2.19e-17,39;UBERON:0002410,2.41e-14,9;UBERON:0002619,7.74e-14,17;UBERON:0002021,3.26e-12,10;UBERON:0000411,3.26e-12,10;UBERON:0001950,3.26e-12,10;UBERON:0000956,3.42e-12,21;UBERON:0001869,3.42e-12,21;UBERON:0000203,3.42e-12,21;UBERON:0000010,2.90e-11,11;UBERON:0003076,7.86e-11,12;UBERON:0003057,7.86e-11,12;UBERON:0002240,1.95e-08,6;UBERON:0005174,1.95e-08,6;UBERON:0001137,1.95e-08,6;UBERON:0011216,5.74e-08,194;UBERON:0000025,8.40e-08,114;UBERON:0002420,2.87e-07,8;UBERON:0007245,2.87e-07,8;UBERON:0010009,2.87e-07,8;UBERON:0010011,2.87e-07,8;UBERON:0000454,2.87e-07,8;UBERON:0004111,3.22e-07,122;UBERON:0001948,3.42e-07,5;UBERON:0002315,3.42e-07,5
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,1.10128051297009,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,1.61853168687678,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.270011876663381,0.210324961351382,2.57085885963423,2.87129103237098,1.34739879136449,1.15014565221884,1.83843757322004,7.70811166995721,4.46905683298157,5.9906547969935,1.84640802822271,1.28082701043374,1.04182674111352,3.90856198601933,2.25105044012672,2.75036845998258,4.12480019663135,3.55929201997757,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,1.04091196059682,0.608930956624282,0.691846491768175,0.452167921657868,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0,0,0,0,10.2473278954042,10.2628886338593,0,0,0,0,3.14560342750128,3.66000482254901,0.502617408451458,2.9550134432687,2.81287003063364,2.70124457927428,1.62241263067758,0.712875546952214,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,1.0803727788321,0.30140963567143,1.56483948048054,1.66547836370305,1.12442069471675,0,0.431135985865684,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,1.26173969138476,1.13195073617213,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,1.37098215131675,1.1270773567308,0.610953983535943,1.93952487167626,0.841629838683823,1.89709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.28192722458169,0,0.252470927204373,11.3582958989852,12.1036010731958,10.3403230911743,8.12493913038677,9.35754431146055,9.90767857760913,8.50102473517278,5.84511715822624,5.53402889125133,5.78378369559253,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0,0.214337035031592,0,1.24858172321449,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,0,0.291480836629851,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0.66183396182839,1.16670713006429,0.774958940866387,0.675824501963113,0.352071715937262,0.39061315453185,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.40594455281163,4.7955776383945,3.0215755895588,3.37511250115903,2.70192721934532,1.35942722695261,3.62432218226274,0,0.399024873401031,0.853668028770671,0.972426868273176,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,1.01078884705519,0,0.565879024158229,0.0936415074698824,0.640251524048693,0.631790158511746,0.952587382566147,0.695305955669133,1.15745532278223,0,1.03039244094078,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,1.15743966588685,0.749431733813838,0.701794825336225,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,1.10128051297009,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,1.61853168687678,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.270011876663381,0.210324961351382,2.57085885963423,2.87129103237098,1.34739879136449,1.15014565221884,1.83843757322004,7.70811166995721,4.46905683298157,5.9906547969935,1.84640802822271,1.28082701043374,1.04182674111352,3.90856198601933,2.25105044012672,2.75036845998258,4.12480019663135,3.55929201997757,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,1.04091196059682,0.608930956624282,0.691846491768175,0.452167921657868,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0,0,0,0,10.2473278954042,10.2628886338593,0,0,0,0,3.14560342750128,3.66000482254901,0.502617408451458,2.9550134432687,2.81287003063364,2.70124457927428,1.62241263067758,0.712875546952214,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,1.0803727788321,0.30140963567143,1.56483948048054,1.66547836370305,1.12442069471675,0,0.431135985865684,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,1.26173969138476,1.13195073617213,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,1.37098215131675,1.1270773567308,0.610953983535943,1.93952487167626,0.841629838683823,1.89709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.28192722458169,0,0.252470927204373,11.3582958989852,12.1036010731958,10.3403230911743,8.12493913038677,9.35754431146055,9.90767857760913,8.50102473517278,5.84511715822624,5.53402889125133,5.78378369559253,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0,0.214337035031592,0,1.24858172321449,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,0,0.291480836629851,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0.66183396182839,1.16670713006429,0.774958940866387,0.675824501963113,0.352071715937262,0.39061315453185,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.40594455281163,4.7955776383945,3.0215755895588,3.37511250115903,2.70192721934532,1.35942722695261,3.62432218226274,0,0.399024873401031,0.853668028770671,0.972426868273176,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,1.01078884705519,0,0.565879024158229,0.0936415074698824,0.640251524048693,0.631790158511746,0.952587382566147,0.695305955669133,1.15745532278223,0,1.03039244094078,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,1.15743966588685,0.749431733813838,0.701794825336225,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p6@Gria4
|short_description=p6@Gria4
}}
}}

Latest revision as of 18:44, 26 September 2015

Short description:p6@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 74bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system6.22e-4473
nervous system2.34e-4275
ectoderm-derived structure1.87e-3795
ectoderm1.87e-3795
presumptive ectoderm1.87e-3795
neurectoderm1.38e-3264
neural plate1.38e-3264
presumptive neural plate1.38e-3264
regional part of nervous system3.75e-3154
neural tube1.87e-2852
neural rod1.87e-2852
future spinal cord1.87e-2852
neural keel1.87e-2852
ecto-epithelium2.20e-2873
gray matter8.84e-2434
brain6.70e-2347
future brain6.70e-2347
regional part of brain1.09e-2146
structure with developmental contribution from neural crest7.92e-2192
pre-chordal neural plate1.47e-1849
anterior neural tube1.93e-1840
brain grey matter3.79e-1829
regional part of telencephalon3.79e-1829
telencephalon3.79e-1829
regional part of forebrain2.19e-1739
forebrain2.19e-1739
future forebrain2.19e-1739
autonomic nervous system2.41e-149
regional part of cerebral cortex7.74e-1417
occipital lobe3.26e-1210
visual cortex3.26e-1210
neocortex3.26e-1210
cerebral cortex3.42e-1221
cerebral hemisphere3.42e-1221
pallium3.42e-1221
peripheral nervous system2.90e-1111
posterior neural tube7.86e-1112
chordal neural plate7.86e-1112
spinal cord1.95e-086
dorsal region element1.95e-086
dorsum1.95e-086
organ system subdivision5.74e-08194
tube8.40e-08114
basal ganglion2.87e-078
nuclear complex of neuraxis2.87e-078
aggregate regional part of brain2.87e-078
collection of basal ganglia2.87e-078
cerebral subcortex2.87e-078
anatomical conduit3.22e-07122
regional part of spinal cord3.42e-075
gray matter of spinal cord3.42e-075
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