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FFCP PHASE1:Mm9::chr6:142913316..142913359,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:142913316..142913359,-
|DHSsupport=NA
|short_description=p3@St8sia1
|DPIdataset=NA
|description=CAGE_peak_3_at_St8sia1_5end
|association_with_transcript=-344bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end
|EntrezGene=20449
|EntrezGene=20449
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q64687
|UniProt=Q64687
|association_with_transcript=-344bp_to_ENSMUST00000032421,NM_011374,uc009epv.1_5end
|cluster_id=chr6:142913316..142913359,-
|description=CAGE_peak_3_at_St8sia1_5end
|id=chr6:142913316..142913359,-
|ontology_enrichment_celltype=CL:0000117!5.09e-17!23;CL:0000337!5.09e-17!23;CL:0000540!1.71e-12!33;CL:0000047!1.71e-12!33;CL:0000031!1.71e-12!33;CL:0000404!1.71e-12!33;CL:0000393!2.08e-08!39;CL:0000211!2.08e-08!39;CL:0002319!1.81e-07!43;CL:0000221!2.36e-07!44;CL:0000133!2.36e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,7.71e-26,23;CL:0000337,7.71e-26,23;CL:0000540,2.46e-15,33;CL:0000047,2.46e-15,33;CL:0000031,2.46e-15,33;CL:0000404,2.46e-15,33;CL:0000393,1.05e-11,39;CL:0000211,1.05e-11,39;CL:0002319,6.95e-10,43;CL:0000221,1.74e-09,44;CL:0000133,1.74e-09,44;CL:0002609,4.10e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!8.61e-26!86;UBERON:0000153!1.57e-24!94;UBERON:0000033!2.32e-22!63;UBERON:0001049!5.51e-22!52;UBERON:0005068!5.51e-22!52;UBERON:0006241!5.51e-22!52;UBERON:0007135!5.51e-22!52;UBERON:0001017!6.97e-22!73;UBERON:0005743!6.97e-22!73;UBERON:0000955!4.34e-21!50;UBERON:0006238!4.34e-21!50;UBERON:0002346!1.36e-20!71;UBERON:0003075!1.36e-20!71;UBERON:0007284!1.36e-20!71;UBERON:0002616!1.60e-20!49;UBERON:0000073!1.83e-20!75;UBERON:0001016!1.83e-20!75;UBERON:0003056!3.29e-20!49;UBERON:0002020!7.75e-19!34;UBERON:0003080!3.83e-17!40;UBERON:0002780!1.88e-16!39;UBERON:0001890!1.88e-16!39;UBERON:0006240!1.88e-16!39;UBERON:0004121!6.62e-16!102;UBERON:0000924!6.62e-16!102;UBERON:0006601!6.62e-16!102;UBERON:0002791!6.77e-16!29;UBERON:0003528!6.77e-16!29;UBERON:0001893!6.77e-16!29;UBERON:0000956!1.78e-10!21;UBERON:0001869!1.78e-10!21;UBERON:0000203!1.78e-10!21;UBERON:0002619!8.85e-08!17;UBERON:0002420!8.02e-07!8;UBERON:0007245!8.02e-07!8;UBERON:0010009!8.02e-07!8;UBERON:0010011!8.02e-07!8;UBERON:0000454!8.02e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-31,54;UBERON:0002346,3.86e-31,64;UBERON:0003075,3.86e-31,64;UBERON:0007284,3.86e-31,64;UBERON:0002020,7.59e-30,34;UBERON:0001049,3.45e-29,52;UBERON:0005068,3.45e-29,52;UBERON:0006241,3.45e-29,52;UBERON:0007135,3.45e-29,52;UBERON:0001017,9.78e-27,73;UBERON:0003056,8.63e-26,49;UBERON:0001016,1.42e-25,75;UBERON:0010371,3.07e-25,73;UBERON:0003528,3.42e-25,29;UBERON:0002791,3.42e-25,29;UBERON:0001893,3.42e-25,29;UBERON:0000955,1.41e-24,47;UBERON:0006238,1.41e-24,47;UBERON:0004121,1.81e-24,95;UBERON:0000924,1.81e-24,95;UBERON:0006601,1.81e-24,95;UBERON:0002616,9.67e-24,46;UBERON:0003080,8.44e-22,40;UBERON:0002780,9.11e-21,39;UBERON:0001890,9.11e-21,39;UBERON:0006240,9.11e-21,39;UBERON:0010314,1.07e-16,92;UBERON:0000956,1.38e-16,21;UBERON:0001869,1.38e-16,21;UBERON:0000203,1.38e-16,21;UBERON:0002619,2.74e-12,17;UBERON:0002420,7.91e-10,8;UBERON:0007245,7.91e-10,8;UBERON:0010009,7.91e-10,8;UBERON:0010011,7.91e-10,8;UBERON:0000454,7.91e-10,8;UBERON:0002021,1.13e-09,10;UBERON:0000411,1.13e-09,10;UBERON:0001950,1.13e-09,10;UBERON:0003076,8.87e-08,12;UBERON:0003057,8.87e-08,12;UBERON:0000483,3.24e-07,174;UBERON:0000119,5.93e-07,176;UBERON:0000369,6.92e-07,5;UBERON:0002435,6.92e-07,5;UBERON:0000204,6.92e-07,5;UBERON:0010082,6.92e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0.513653904676515,0.0797721589953364,3.42401459862411,2.36035086531293,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,3.62681071005672,2.35265659399725,0,0,0,8.29497489524351,16.9277113367051,9.50747105259269,0.338844532069132,0,0,0,0,0,0.768436610643109,9.85051316930538,11.2054928815303,9.04397333810943,2.28520787523043,1.98781686856452,7.7169203505421,6.51749202924007,7.35375029288017,7.70811166995721,5.36286819957788,10.4452442614246,15.9582408153535,18.0230657896747,13.5437476344758,4.18774498502071,7.87867654044352,6.1119299110724,4.71405736757868,5.12538050876771,11.7431650869939,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.867426633830679,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,5.5628351432194,4.39838084308256,0,0,0,0,6.5907881338122,3.20250421973039,5.78010019719176,5.56237824615285,5.8814555185976,4.36354893575076,4.2182728397617,0.203678727700633,0,0,0.420883711772948,2.60240885925407,1.14951052216736,1.0803727788321,1.20563854268572,1.29269348387523,1.5373646434182,1.40552586839593,2.32833033665114,1.29340795759705,1.13463648100692,0.175951124163949,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.73376933133365,6.48299057989492,0,0,1.2797295032114,1.85789337488351,0.644337306610467,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.969762435838129,0.561086559122548,0.252946148497029,1.03327103585722,0.941992367048249,0.863780147452604,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,2.69586879162067,0,0,0,0,0.646270193198397,0,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,2.89189184779626,0,0.712262414669021,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,1.8006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,0.658196082408484,0.913394847343798,0,0,0,0,0,0,0,0,0.291480836629851,3.15223013417866,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.457556346413045,0.169978429993855,0,0.276399947608848,0,1.10717597753397,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.299033092087958,0.827292452285488,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,1.16928740680016,0.895133478337407,1.58945083825012,1.56254084375959,1.18151621739662,1.9183625490148,1.447929326445,1.61321896218945,1.75424185331554,2.40529604100824,2.45441494581295,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,3.95262319390481,2.74033007908257,3.7769694869485,5.40018000185445,4.5032120322422,4.98456649882625,2.07104124700728,0.830298780673413,1.99512436700516,0.682934423016537,0.972426868273176,1.04806581313991,0.919217542250071,0.44449345560323,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.943131706930381,1.21733959710847,1.02440243847791,0.804096565378586,0.476293691283074,0.811190281613988,0.578727661391115,2.06042950401653,1.03039244094078,0.685738504770831,1.06485483695602,0.476872379894642,0.872078499793971,0.941093804153306,1.26921911837515,0.548783918618318,0.789209134313529,1.22223702461276,1.12228454331548,1.30498519936592,1.28055827088233,0.409231043169689,0.929621047115796,0.578719832943424,2.74791635731741,0.935726433781634,0.214871054048298,0.382576664137687,0.220591419119515,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0.513653904676515,0.0797721589953364,3.42401459862411,2.36035086531293,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,3.62681071005672,2.35265659399725,0,0,0,8.29497489524351,16.9277113367051,9.50747105259269,0.338844532069132,0,0,0,0,0,0.768436610643109,9.85051316930538,11.2054928815303,9.04397333810943,2.28520787523043,1.98781686856452,7.7169203505421,6.51749202924007,7.35375029288017,7.70811166995721,5.36286819957788,10.4452442614246,15.9582408153535,18.0230657896747,13.5437476344758,4.18774498502071,7.87867654044352,6.1119299110724,4.71405736757868,5.12538050876771,11.7431650869939,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.867426633830679,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,5.5628351432194,4.39838084308256,0,0,0,0,6.5907881338122,3.20250421973039,5.78010019719176,5.56237824615285,5.8814555185976,4.36354893575076,4.2182728397617,0.203678727700633,0,0,0.420883711772948,2.60240885925407,1.14951052216736,1.0803727788321,1.20563854268572,1.29269348387523,1.5373646434182,1.40552586839593,2.32833033665114,1.29340795759705,1.13463648100692,0.175951124163949,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.73376933133365,6.48299057989492,0,0,1.2797295032114,1.85789337488351,0.644337306610467,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.969762435838129,0.561086559122548,0.252946148497029,1.03327103585722,0.941992367048249,0.863780147452604,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,2.69586879162067,0,0,0,0,0.646270193198397,0,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,2.89189184779626,0,0.712262414669021,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,1.8006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,0.658196082408484,0.913394847343798,0,0,0,0,0,0,0,0,0.291480836629851,3.15223013417866,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.457556346413045,0.169978429993855,0,0.276399947608848,0,1.10717597753397,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.299033092087958,0.827292452285488,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,1.16928740680016,0.895133478337407,1.58945083825012,1.56254084375959,1.18151621739662,1.9183625490148,1.447929326445,1.61321896218945,1.75424185331554,2.40529604100824,2.45441494581295,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,3.95262319390481,2.74033007908257,3.7769694869485,5.40018000185445,4.5032120322422,4.98456649882625,2.07104124700728,0.830298780673413,1.99512436700516,0.682934423016537,0.972426868273176,1.04806581313991,0.919217542250071,0.44449345560323,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.943131706930381,1.21733959710847,1.02440243847791,0.804096565378586,0.476293691283074,0.811190281613988,0.578727661391115,2.06042950401653,1.03039244094078,0.685738504770831,1.06485483695602,0.476872379894642,0.872078499793971,0.941093804153306,1.26921911837515,0.548783918618318,0.789209134313529,1.22223702461276,1.12228454331548,1.30498519936592,1.28055827088233,0.409231043169689,0.929621047115796,0.578719832943424,2.74791635731741,0.935726433781634,0.214871054048298,0.382576664137687,0.220591419119515,0
|short_description=p3@St8sia1
}}
}}

Latest revision as of 21:35, 26 September 2015

Short description:p3@St8sia1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_St8sia1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -344bp_to_ENSMUST00000032421, NM_011374, uc009epv.1_5end
EntrezGene:St8sia1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@St8sia1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.20e-3154
neurectoderm3.86e-3164
neural plate3.86e-3164
presumptive neural plate3.86e-3164
gray matter7.59e-3034
neural tube3.45e-2952
neural rod3.45e-2952
future spinal cord3.45e-2952
neural keel3.45e-2952
central nervous system9.78e-2773
pre-chordal neural plate8.63e-2649
nervous system1.42e-2575
ecto-epithelium3.07e-2573
brain grey matter3.42e-2529
regional part of telencephalon3.42e-2529
telencephalon3.42e-2529
brain1.41e-2447
future brain1.41e-2447
ectoderm-derived structure1.81e-2495
ectoderm1.81e-2495
presumptive ectoderm1.81e-2495
regional part of brain9.67e-2446
anterior neural tube8.44e-2240
regional part of forebrain9.11e-2139
forebrain9.11e-2139
future forebrain9.11e-2139
structure with developmental contribution from neural crest1.07e-1692
cerebral cortex1.38e-1621
cerebral hemisphere1.38e-1621
pallium1.38e-1621
regional part of cerebral cortex2.74e-1217
basal ganglion7.91e-108
nuclear complex of neuraxis7.91e-108
aggregate regional part of brain7.91e-108
collection of basal ganglia7.91e-108
cerebral subcortex7.91e-108
occipital lobe1.13e-0910
visual cortex1.13e-0910
neocortex1.13e-0910
posterior neural tube8.87e-0812
chordal neural plate8.87e-0812
epithelium3.24e-07174
cell layer5.93e-07176
corpus striatum6.92e-075
striatum6.92e-075
ventral part of telencephalon6.92e-075
future corpus striatum6.92e-075
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