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FFCP PHASE1:Mm9::chr6:144996156..144996180,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12035
|EntrezGene=12035
|HGNC=
|HGNC=
|MCL_coexpression_id=486
|TSSclassifier=NA
|UniProt=B2KFA9
|UniProt=B2KFA9
|association_with_transcript=0bp_to_ENSMUST00000149769_5end
|association_with_transcript=0bp_to_ENSMUST00000149769_5end
|cluster_id=chr6:144996156..144996180,-
|description=CAGE_peak_4_at_Bcat1_5end
|description=CAGE_peak_4_at_Bcat1_5end
|id=chr6:144996156..144996180,-
|id=chr6:144996156..144996180,-
|ontology_enrichment_celltype=CL:0002319!1.27e-13!43;CL:0000221!6.57e-13!44;CL:0000133!6.57e-13!44;CL:0000117!2.85e-12!23;CL:0000337!2.85e-12!23;CL:0000055!1.22e-11!50;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33;CL:0000393!1.38e-07!39;CL:0000211!1.38e-07!39
|ontology_enrichment_celltype=CL:0002319!1.27e-13!43;CL:0000221!6.57e-13!44;CL:0000133!6.57e-13!44;CL:0000117!2.85e-12!23;CL:0000337!2.85e-12!23;CL:0000055!1.22e-11!50;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33;CL:0000393!1.38e-07!39;CL:0000211!1.38e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-16,23;CL:0000337,4.37e-16,23;CL:0002319,8.01e-16,43;CL:0000221,3.21e-15,44;CL:0000133,3.21e-15,44;CL:0000540,4.69e-09,33;CL:0000047,4.69e-09,33;CL:0000031,4.69e-09,33;CL:0000404,4.69e-09,33;CL:0000333,6.82e-09,10;CL:0000095,6.82e-09,10;CL:0000243,6.82e-09,10;CL:0000123,6.82e-09,10;CL:0000125,6.82e-09,10;CL:0000030,6.82e-09,10;CL:0000339,6.82e-09,10;CL:0000393,4.30e-08,39;CL:0000211,4.30e-08,39;CL:0002453,1.60e-07,8;CL:0002321,4.78e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.12e-23!75;UBERON:0001016!8.12e-23!75;UBERON:0004121!8.62e-23!102;UBERON:0000924!8.62e-23!102;UBERON:0006601!8.62e-23!102;UBERON:0001017!1.05e-21!73;UBERON:0005743!1.05e-21!73;UBERON:0000033!1.29e-21!63;UBERON:0002346!1.37e-21!71;UBERON:0003075!1.37e-21!71;UBERON:0007284!1.37e-21!71;UBERON:0003056!6.35e-19!49;UBERON:0001049!1.75e-18!52;UBERON:0005068!1.75e-18!52;UBERON:0006241!1.75e-18!52;UBERON:0007135!1.75e-18!52;UBERON:0000955!2.22e-18!50;UBERON:0006238!2.22e-18!50;UBERON:0002616!8.53e-18!49;UBERON:0003080!9.32e-13!40;UBERON:0002780!3.03e-12!39;UBERON:0001890!3.03e-12!39;UBERON:0006240!3.03e-12!39;UBERON:0002020!2.80e-11!34;UBERON:0007811!8.48e-10!86;UBERON:0002791!9.01e-10!29;UBERON:0003528!9.01e-10!29;UBERON:0001893!9.01e-10!29;UBERON:0000153!2.24e-09!94;UBERON:0000970!9.58e-08!9;UBERON:0000019!9.58e-08!9;UBERON:0000047!9.58e-08!9;UBERON:0004088!9.58e-08!9;UBERON:0002104!9.58e-08!9;UBERON:0001456!9.58e-08!9;UBERON:0003072!9.58e-08!9;UBERON:0003071!9.58e-08!9;UBERON:0004128!9.58e-08!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.38e-24,95;UBERON:0000924,2.38e-24,95;UBERON:0006601,2.38e-24,95;UBERON:0002346,7.00e-24,64;UBERON:0003075,7.00e-24,64;UBERON:0007284,7.00e-24,64;UBERON:0001016,2.06e-21,75;UBERON:0001017,5.23e-20,73;UBERON:0010371,5.81e-19,73;UBERON:0000073,1.43e-18,54;UBERON:0003056,1.87e-18,49;UBERON:0001049,2.96e-17,52;UBERON:0005068,2.96e-17,52;UBERON:0006241,2.96e-17,52;UBERON:0007135,2.96e-17,52;UBERON:0000955,1.05e-15,47;UBERON:0006238,1.05e-15,47;UBERON:0002616,5.73e-15,46;UBERON:0010314,2.75e-13,92;UBERON:0002020,5.71e-11,34;UBERON:0003080,1.05e-10,40;UBERON:0000970,1.20e-10,9;UBERON:0000019,1.20e-10,9;UBERON:0000047,1.20e-10,9;UBERON:0010312,1.20e-10,9;UBERON:0004088,1.20e-10,9;UBERON:0002104,1.20e-10,9;UBERON:0001456,1.20e-10,9;UBERON:0003072,1.20e-10,9;UBERON:0004128,1.20e-10,9;UBERON:0003071,1.20e-10,9;UBERON:0002780,4.50e-10,39;UBERON:0001890,4.50e-10,39;UBERON:0006240,4.50e-10,39;UBERON:0003528,1.15e-09,29;UBERON:0002791,1.15e-09,29;UBERON:0001893,1.15e-09,29;UBERON:0001444,3.61e-08,11;UBERON:0003076,5.64e-08,12;UBERON:0003057,5.64e-08,12;UBERON:0000474,2.12e-07,9;UBERON:0000020,3.00e-07,12;UBERON:0001032,3.00e-07,12;UBERON:0004456,3.00e-07,12;UBERON:0001954,5.71e-07,7;UBERON:0003022,5.71e-07,7;UBERON:0002421,5.71e-07,7;UBERON:0000349,5.71e-07,7;UBERON:0002600,5.71e-07,7;UBERON:0002420,6.09e-07,8;UBERON:0007245,6.09e-07,8;UBERON:0010009,6.09e-07,8;UBERON:0010011,6.09e-07,8;UBERON:0000454,6.09e-07,8
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,5.23260375313072,14.9386604259441,42.5801478972681,4.61955191363696,2.87505128729943,0,0,0,1.28629718017973,1.71920063963254,0.515672092277442,8.49729135610311,7.93486468908049,4.43681982454325,2.03306719241479,0.889294796111139,0.449949858640699,0,0,2.09720077362883,4.2264013585371,5.91030790158323,6.88530285491622,3.99617426567626,1.99955689082663,1.98781686856452,4.5321595709533,5.84657373211242,1.83843757322004,7.70811166995721,1.78762273319263,7.52672012955593,7.12185953743047,7.41049913179518,3.12548022334056,4.18774498502071,2.8138130501584,3.81995619442025,0.883885756421003,1.70846016958924,2.23679334990361,2.27178579999552,6.04572480854284,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0.29688427812965,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0.741584903203122,0.144599356919912,0,0.808834249737046,0,0,0,3.51336956413857,7.54008144528438,0,0,0,0,4.19413790333504,2.28750301409313,2.01046963380583,0.869121600961382,2.81287003063364,2.70124457927428,6.48965052271031,0.712875546952214,0.497627882440372,0.505445516867349,5.47148825304832,8.45782879257574,8.96618207290544,15.48534316326,15.6733010549144,24.9693951885373,39.7152532883034,48.3500898728201,12.4177617954728,0.431135985865684,1.32374256117473,0.879755620819744,0.657587197282725,0.278047249225598,0,0,0.995171334092466,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0,0,0,0,0,0.350296027101508,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.134206418760372,2.73376933133365,5.65975368086064,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,1.1221731182451,0.569128834118316,3.24742325555125,5.33795674660674,3.08492909804501,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,6.58257418949947,17.6989646754227,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,0,0,0.395287777946524,4.81981974632711,64.1569185141374,3.38324646967785,2.60619134965722,54.2751704579642,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,3.6012218806262,2.8458910432206,0.428674070063185,0.177340233642274,0.891844088010353,0.987294123612726,2.13125464380219,2.11204537257339,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,3.55450103224597,1.52853794622324,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.938857909166032,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,126.497988454097,207.144487046277,9.64657705855796,0,0.564751842617067,0.460325236507177,1.14579102687879,0.68741272937475,0.685082519770642,0,0.675022500231806,1.35096360967266,1.81256963593682,0,2.80225838477277,1.99512436700516,2.21953687480374,0.486213434136588,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,1.28367683836726,0.505394423527595,0.25347929989024,2.07488975524684,1.12369808963859,1.08842759088278,1.43588672389033,2.85776214769844,0.927074607558844,1.15745532278223,1.64834360321323,1.17759136107518,1.02860775715625,1.24233064311536,0.476872379894642,1.30811774969096,1.50575008664529,0.761531471025089,0.548783918618318,0.526139422875686,1.35804113845862,0,1.77952527186261,0.985044823755635,0.818462086339379,1.08455788830176,0.578719832943424,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,5.23260375313072,14.9386604259441,42.5801478972681,4.61955191363696,2.87505128729943,0,0,0,1.28629718017973,1.71920063963254,0.515672092277442,8.49729135610311,7.93486468908049,4.43681982454325,2.03306719241479,0.889294796111139,0.449949858640699,0,0,2.09720077362883,4.2264013585371,5.91030790158323,6.88530285491622,3.99617426567626,1.99955689082663,1.98781686856452,4.5321595709533,5.84657373211242,1.83843757322004,7.70811166995721,1.78762273319263,7.52672012955593,7.12185953743047,7.41049913179518,3.12548022334056,4.18774498502071,2.8138130501584,3.81995619442025,0.883885756421003,1.70846016958924,2.23679334990361,2.27178579999552,6.04572480854284,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0.29688427812965,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0.741584903203122,0.144599356919912,0,0.808834249737046,0,0,0,3.51336956413857,7.54008144528438,0,0,0,0,4.19413790333504,2.28750301409313,2.01046963380583,0.869121600961382,2.81287003063364,2.70124457927428,6.48965052271031,0.712875546952214,0.497627882440372,0.505445516867349,5.47148825304832,8.45782879257574,8.96618207290544,15.48534316326,15.6733010549144,24.9693951885373,39.7152532883034,48.3500898728201,12.4177617954728,0.431135985865684,1.32374256117473,0.879755620819744,0.657587197282725,0.278047249225598,0,0,0.995171334092466,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0,0,0,0,0,0.350296027101508,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.134206418760372,2.73376933133365,5.65975368086064,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,1.1221731182451,0.569128834118316,3.24742325555125,5.33795674660674,3.08492909804501,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,6.58257418949947,17.6989646754227,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,0,0,0.395287777946524,4.81981974632711,64.1569185141374,3.38324646967785,2.60619134965722,54.2751704579642,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,3.6012218806262,2.8458910432206,0.428674070063185,0.177340233642274,0.891844088010353,0.987294123612726,2.13125464380219,2.11204537257339,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,3.55450103224597,1.52853794622324,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.938857909166032,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,126.497988454097,207.144487046277,9.64657705855796,0,0.564751842617067,0.460325236507177,1.14579102687879,0.68741272937475,0.685082519770642,0,0.675022500231806,1.35096360967266,1.81256963593682,0,2.80225838477277,1.99512436700516,2.21953687480374,0.486213434136588,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,1.28367683836726,0.505394423527595,0.25347929989024,2.07488975524684,1.12369808963859,1.08842759088278,1.43588672389033,2.85776214769844,0.927074607558844,1.15745532278223,1.64834360321323,1.17759136107518,1.02860775715625,1.24233064311536,0.476872379894642,1.30811774969096,1.50575008664529,0.761531471025089,0.548783918618318,0.526139422875686,1.35804113845862,0,1.77952527186261,0.985044823755635,0.818462086339379,1.08455788830176,0.578719832943424,2.24829520144151,0.935726433781634,0.859484216193193,0.765153328275374,0,0.231867835620421
|short_description=p4@Bcat1
|short_description=p4@Bcat1
}}
}}

Latest revision as of 21:51, 26 September 2015

Short description:p4@Bcat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Bcat1_5end
Coexpression cluster:MCL_coexpression_mm9:486
Association with transcript: 0bp_to_ENSMUST00000149769_5end
EntrezGene:Bcat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Bcat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.94
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C342.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F96.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C68.46
eyeball, embryo E14.CNhs10521.399-16E28.97
eyeball, embryo E15.CNhs10593.426-16C915.49
eyeball, embryo E17.CNhs11023.1261-18D415.67
eyeball, neonate N00.CNhs11207.633-15C624.97
eyeball, neonate N01.CNhs11140.1532-43E739.72
eyeball, neonate N02.CNhs11205.1551-44G848.35
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A317.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I764.16
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G654.28
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F5126.50
uterus, adult.CNhs10509.92-27E5207.14
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.38e-2495
ectoderm2.38e-2495
presumptive ectoderm2.38e-2495
neurectoderm7.00e-2464
neural plate7.00e-2464
presumptive neural plate7.00e-2464
nervous system2.06e-2175
central nervous system5.23e-2073
ecto-epithelium5.81e-1973
regional part of nervous system1.43e-1854
pre-chordal neural plate1.87e-1849
neural tube2.96e-1752
neural rod2.96e-1752
future spinal cord2.96e-1752
neural keel2.96e-1752
brain1.05e-1547
future brain1.05e-1547
regional part of brain5.73e-1546
structure with developmental contribution from neural crest2.75e-1392
gray matter5.71e-1134
anterior neural tube1.05e-1040
eye1.20e-109
camera-type eye1.20e-109
simple eye1.20e-109
immature eye1.20e-109
ocular region1.20e-109
visual system1.20e-109
face1.20e-109
optic cup1.20e-109
optic vesicle1.20e-109
eye primordium1.20e-109
regional part of forebrain4.50e-1039
forebrain4.50e-1039
future forebrain4.50e-1039
brain grey matter1.15e-0929
regional part of telencephalon1.15e-0929
telencephalon1.15e-0929
subdivision of head3.61e-0811
posterior neural tube5.64e-0812
chordal neural plate5.64e-0812
female reproductive system2.12e-079
sense organ3.00e-0712
sensory system3.00e-0712
entire sense organ system3.00e-0712
Ammon's horn5.71e-077
lobe parts of cerebral cortex5.71e-077
hippocampal formation5.71e-077
limbic system5.71e-077
limbic lobe5.71e-077
basal ganglion6.09e-078
nuclear complex of neuraxis6.09e-078
aggregate regional part of brain6.09e-078
collection of basal ganglia6.09e-078
cerebral subcortex6.09e-078
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