FFCP PHASE1:Mm9::chr6:144996184..144996217,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=22|UniProt=B2KFA9|association_with_transcript=-3bp_to_ENSMUST00000149769_5end|description=CAGE_peak_10_at_Bcat1_5end|id=chr6:144996184..144996217,-|ontology_enrichment_celltype=CL:0000117!4.48e-15!23;CL:0000337!4.48e-15!23;CL:0002319!2.59e-12!43;CL:0000540!8.18e-12!33;CL:0000047!8.18e-12!33;CL:0000031!8.18e-12!33;CL:0000404!8.18e-12!33;CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0000055!1.11e-09!50;CL:0000393!2.33e-09!39;CL:0000211!2.33e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-21,23;CL:0000337,1.83e-21,23;CL:0000540,1.71e-12,33;CL:0000047,1.71e-12,33;CL:0000031,1.71e-12,33;CL:0000404,1.71e-12,33;CL:0002319,1.21e-10,43;CL:0000221,3.24e-10,44;CL:0000133,3.24e-10,44;CL:0000393,2.04e-09,39;CL:0000211,2.04e-09,39;CL:0002609,4.19e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.05e-28!71;UBERON:0003075!7.05e-28!71;UBERON:0007284!7.05e-28!71;UBERON:0000073!2.72e-27!75;UBERON:0001016!2.72e-27!75;UBERON:0000033!2.95e-27!63;UBERON:0004121!3.48e-27!102;UBERON:0000924!3.48e-27!102;UBERON:0006601!3.48e-27!102;UBERON:0001017!4.83e-27!73;UBERON:0005743!4.83e-27!73;UBERON:0003056!1.41e-25!49;UBERON:0001049!2.96e-24!52;UBERON:0005068!2.96e-24!52;UBERON:0006241!2.96e-24!52;UBERON:0007135!2.96e-24!52;UBERON:0000955!4.20e-24!50;UBERON:0006238!4.20e-24!50;UBERON:0002616!2.89e-23!49;UBERON:0003080!1.40e-19!40;UBERON:0002020!1.50e-19!34;UBERON:0002780!3.73e-19!39;UBERON:0001890!3.73e-19!39;UBERON:0006240!3.73e-19!39;UBERON:0002791!9.30e-18!29;UBERON:0003528!9.30e-18!29;UBERON:0001893!9.30e-18!29;UBERON:0000153!3.51e-14!94;UBERON:0007811!1.34e-13!86;UBERON:0000956!8.40e-13!21;UBERON:0001869!8.40e-13!21;UBERON:0000203!8.40e-13!21;UBERON:0002619!6.32e-10!17;UBERON:0000970!8.31e-07!9;UBERON:0000019!8.31e-07!9;UBERON:0000047!8.31e-07!9;UBERON:0004088!8.31e-07!9;UBERON:0002104!8.31e-07!9;UBERON:0001456!8.31e-07!9;UBERON:0003072!8.31e-07!9;UBERON:0003071!8.31e-07!9;UBERON:0004128!8.31e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.43e-36,64;UBERON:0003075,6.43e-36,64;UBERON:0007284,6.43e-36,64;UBERON:0000073,2.12e-32,54;UBERON:0003056,6.61e-31,49;UBERON:0001049,7.85e-31,52;UBERON:0005068,7.85e-31,52;UBERON:0006241,7.85e-31,52;UBERON:0007135,7.85e-31,52;UBERON:0010371,3.03e-29,73;UBERON:0001017,3.98e-29,73;UBERON:0004121,5.80e-29,95;UBERON:0000924,5.80e-29,95;UBERON:0006601,5.80e-29,95;UBERON:0000955,4.15e-28,47;UBERON:0006238,4.15e-28,47;UBERON:0001016,7.18e-28,75;UBERON:0002616,6.13e-27,46;UBERON:0002020,7.78e-27,34;UBERON:0003528,3.65e-24,29;UBERON:0002791,3.65e-24,29;UBERON:0001893,3.65e-24,29;UBERON:0003080,1.38e-23,40;UBERON:0002780,5.72e-23,39;UBERON:0001890,5.72e-23,39;UBERON:0006240,5.72e-23,39;UBERON:0010314,1.83e-22,92;UBERON:0000956,6.75e-17,21;UBERON:0001869,6.75e-17,21;UBERON:0000203,6.75e-17,21;UBERON:0002619,1.01e-12,17;UBERON:0000025,1.59e-08,114;UBERON:0002420,2.21e-08,8;UBERON:0007245,2.21e-08,8;UBERON:0010009,2.21e-08,8;UBERON:0010011,2.21e-08,8;UBERON:0000454,2.21e-08,8;UBERON:0002021,2.49e-08,10;UBERON:0000411,2.49e-08,10;UBERON:0001950,2.49e-08,10;UBERON:0000970,5.95e-08,9;UBERON:0000019,5.95e-08,9;UBERON:0000047,5.95e-08,9;UBERON:0010312,5.95e-08,9;UBERON:0004088,5.95e-08,9;UBERON:0002104,5.95e-08,9;UBERON:0001456,5.95e-08,9;UBERON:0003072,5.95e-08,9;UBERON:0004128,5.95e-08,9;UBERON:0003071,5.95e-08,9;UBERON:0003076,1.38e-07,12;UBERON:0003057,1.38e-07,12;UBERON:0004111,4.12e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,1.55543919259427,0,5.75010257459886,0,0,0,0.257259436035947,0.85960031981627,0,7.89034197352431,12.1667925232568,8.87363964908651,0,0,0,0,0,0.898800331555214,0.384218305321555,10.1615820062308,16.3357185381346,9.25429829946081,1.99955689082663,1.32521124570968,7.34944795289724,6.99671938433125,5.51531271966013,3.30347642998166,1.65993539510744,3.99376986466233,7.38563211289086,10.0636407962651,8.33461392890816,4.4669279840221,2.25105044012672,3.20876320331301,1.17851434189467,2.13557521198654,1.3047961207771,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,3.51336956413857,3.14170060220183,0.255457055208591,0,0,0,1.9472783122627,1.83000241127451,4.02093926761166,3.30266208365325,3.3243009452943,6.44142938134636,3.56930778749067,0,0,0,0.841767423545896,7.026503919986,4.59804208866946,6.30217454318722,4.9732589885786,5.8511389270142,6.40568601424249,4.77878795254617,3.88055056108524,0.862271971731369,3.21480336285293,1.23165786914764,0.657587197282725,0,0.696504333044333,0.205782136407943,0,0,0,0,2.07125772535502,1.64168241986767,1.08037236876609,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0,0.268412837520744,4.6263788684108,8.02655976558419,0,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.81651769963376,6.21221938938677,0,0.252470927204373,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,9.3183181762324,3.97432238583152,0.712262414669021,0.162886959353576,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42116078659489,2.8458910432206,0.214337035031592,0.354680467284547,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,2.064507229963,3.84618410961257,0.428736758158132,0,3.3885110557024,3.68260189205742,2.29158205375759,3.09335728218638,2.74033007908257,2.2661816921691,2.70009000092722,2.2516060161211,2.71885445390523,2.5888015587591,3.32119512269365,3.59122386060928,2.04880326904961,1.21553358534147,2.51535795153579,1.10306105070008,2.22246727801615,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,1.50901073108861,1.49826411951812,0.960377286073039,0.918967503289812,0.952587382566147,1.15884325944855,0.578727661391115,0.824171801606613,1.03039244094078,1.02860775715625,0.70990322463735,0.715308569841963,1.0174249164263,1.41164070622996,1.09998990259179,0.365855945745545,0.789209134313529,2.03706170768793,0.561142271657738,0.711810108745045,1.0835493061312,1.22769312950907,1.08455788830176,1.15743966588685,4.74640098082097,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.463735671240843|short_description=p10@Bcat1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=B2KFA9 | |||
|association_with_transcript=-3bp_to_ENSMUST00000149769_5end | |||
|cluster_id=chr6:144996184..144996217,- | |||
|description=CAGE_peak_10_at_Bcat1_5end | |||
|id=chr6:144996184..144996217,- | |||
|ontology_enrichment_celltype=CL:0000117!4.48e-15!23;CL:0000337!4.48e-15!23;CL:0002319!2.59e-12!43;CL:0000540!8.18e-12!33;CL:0000047!8.18e-12!33;CL:0000031!8.18e-12!33;CL:0000404!8.18e-12!33;CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0000055!1.11e-09!50;CL:0000393!2.33e-09!39;CL:0000211!2.33e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-21,23;CL:0000337,1.83e-21,23;CL:0000540,1.71e-12,33;CL:0000047,1.71e-12,33;CL:0000031,1.71e-12,33;CL:0000404,1.71e-12,33;CL:0002319,1.21e-10,43;CL:0000221,3.24e-10,44;CL:0000133,3.24e-10,44;CL:0000393,2.04e-09,39;CL:0000211,2.04e-09,39;CL:0002609,4.19e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.05e-28!71;UBERON:0003075!7.05e-28!71;UBERON:0007284!7.05e-28!71;UBERON:0000073!2.72e-27!75;UBERON:0001016!2.72e-27!75;UBERON:0000033!2.95e-27!63;UBERON:0004121!3.48e-27!102;UBERON:0000924!3.48e-27!102;UBERON:0006601!3.48e-27!102;UBERON:0001017!4.83e-27!73;UBERON:0005743!4.83e-27!73;UBERON:0003056!1.41e-25!49;UBERON:0001049!2.96e-24!52;UBERON:0005068!2.96e-24!52;UBERON:0006241!2.96e-24!52;UBERON:0007135!2.96e-24!52;UBERON:0000955!4.20e-24!50;UBERON:0006238!4.20e-24!50;UBERON:0002616!2.89e-23!49;UBERON:0003080!1.40e-19!40;UBERON:0002020!1.50e-19!34;UBERON:0002780!3.73e-19!39;UBERON:0001890!3.73e-19!39;UBERON:0006240!3.73e-19!39;UBERON:0002791!9.30e-18!29;UBERON:0003528!9.30e-18!29;UBERON:0001893!9.30e-18!29;UBERON:0000153!3.51e-14!94;UBERON:0007811!1.34e-13!86;UBERON:0000956!8.40e-13!21;UBERON:0001869!8.40e-13!21;UBERON:0000203!8.40e-13!21;UBERON:0002619!6.32e-10!17;UBERON:0000970!8.31e-07!9;UBERON:0000019!8.31e-07!9;UBERON:0000047!8.31e-07!9;UBERON:0004088!8.31e-07!9;UBERON:0002104!8.31e-07!9;UBERON:0001456!8.31e-07!9;UBERON:0003072!8.31e-07!9;UBERON:0003071!8.31e-07!9;UBERON:0004128!8.31e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.43e-36,64;UBERON:0003075,6.43e-36,64;UBERON:0007284,6.43e-36,64;UBERON:0000073,2.12e-32,54;UBERON:0003056,6.61e-31,49;UBERON:0001049,7.85e-31,52;UBERON:0005068,7.85e-31,52;UBERON:0006241,7.85e-31,52;UBERON:0007135,7.85e-31,52;UBERON:0010371,3.03e-29,73;UBERON:0001017,3.98e-29,73;UBERON:0004121,5.80e-29,95;UBERON:0000924,5.80e-29,95;UBERON:0006601,5.80e-29,95;UBERON:0000955,4.15e-28,47;UBERON:0006238,4.15e-28,47;UBERON:0001016,7.18e-28,75;UBERON:0002616,6.13e-27,46;UBERON:0002020,7.78e-27,34;UBERON:0003528,3.65e-24,29;UBERON:0002791,3.65e-24,29;UBERON:0001893,3.65e-24,29;UBERON:0003080,1.38e-23,40;UBERON:0002780,5.72e-23,39;UBERON:0001890,5.72e-23,39;UBERON:0006240,5.72e-23,39;UBERON:0010314,1.83e-22,92;UBERON:0000956,6.75e-17,21;UBERON:0001869,6.75e-17,21;UBERON:0000203,6.75e-17,21;UBERON:0002619,1.01e-12,17;UBERON:0000025,1.59e-08,114;UBERON:0002420,2.21e-08,8;UBERON:0007245,2.21e-08,8;UBERON:0010009,2.21e-08,8;UBERON:0010011,2.21e-08,8;UBERON:0000454,2.21e-08,8;UBERON:0002021,2.49e-08,10;UBERON:0000411,2.49e-08,10;UBERON:0001950,2.49e-08,10;UBERON:0000970,5.95e-08,9;UBERON:0000019,5.95e-08,9;UBERON:0000047,5.95e-08,9;UBERON:0010312,5.95e-08,9;UBERON:0004088,5.95e-08,9;UBERON:0002104,5.95e-08,9;UBERON:0001456,5.95e-08,9;UBERON:0003072,5.95e-08,9;UBERON:0004128,5.95e-08,9;UBERON:0003071,5.95e-08,9;UBERON:0003076,1.38e-07,12;UBERON:0003057,1.38e-07,12;UBERON:0004111,4.12e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,1.55543919259427,0,5.75010257459886,0,0,0,0.257259436035947,0.85960031981627,0,7.89034197352431,12.1667925232568,8.87363964908651,0,0,0,0,0,0.898800331555214,0.384218305321555,10.1615820062308,16.3357185381346,9.25429829946081,1.99955689082663,1.32521124570968,7.34944795289724,6.99671938433125,5.51531271966013,3.30347642998166,1.65993539510744,3.99376986466233,7.38563211289086,10.0636407962651,8.33461392890816,4.4669279840221,2.25105044012672,3.20876320331301,1.17851434189467,2.13557521198654,1.3047961207771,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,3.51336956413857,3.14170060220183,0.255457055208591,0,0,0,1.9472783122627,1.83000241127451,4.02093926761166,3.30266208365325,3.3243009452943,6.44142938134636,3.56930778749067,0,0,0,0.841767423545896,7.026503919986,4.59804208866946,6.30217454318722,4.9732589885786,5.8511389270142,6.40568601424249,4.77878795254617,3.88055056108524,0.862271971731369,3.21480336285293,1.23165786914764,0.657587197282725,0,0.696504333044333,0.205782136407943,0,0,0,0,2.07125772535502,1.64168241986767,1.08037236876609,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0,0.268412837520744,4.6263788684108,8.02655976558419,0,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.81651769963376,6.21221938938677,0,0.252470927204373,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,9.3183181762324,3.97432238583152,0.712262414669021,0.162886959353576,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42116078659489,2.8458910432206,0.214337035031592,0.354680467284547,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,2.064507229963,3.84618410961257,0.428736758158132,0,3.3885110557024,3.68260189205742,2.29158205375759,3.09335728218638,2.74033007908257,2.2661816921691,2.70009000092722,2.2516060161211,2.71885445390523,2.5888015587591,3.32119512269365,3.59122386060928,2.04880326904961,1.21553358534147,2.51535795153579,1.10306105070008,2.22246727801615,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,1.50901073108861,1.49826411951812,0.960377286073039,0.918967503289812,0.952587382566147,1.15884325944855,0.578727661391115,0.824171801606613,1.03039244094078,1.02860775715625,0.70990322463735,0.715308569841963,1.0174249164263,1.41164070622996,1.09998990259179,0.365855945745545,0.789209134313529,2.03706170768793,0.561142271657738,0.711810108745045,1.0835493061312,1.22769312950907,1.08455788830176,1.15743966588685,4.74640098082097,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.463735671240843 | |||
|short_description=p10@Bcat1 | |||
}} |
Latest revision as of 21:52, 26 September 2015
Short description: | p10@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -3bp_to_ENSMUST00000149769_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-21 | 23 |
neuron | 1.71e-12 | 33 |
neuronal stem cell | 1.71e-12 | 33 |
neuroblast | 1.71e-12 | 33 |
electrically signaling cell | 1.71e-12 | 33 |
neural cell | 1.21e-10 | 43 |
ectodermal cell | 3.24e-10 | 44 |
neurectodermal cell | 3.24e-10 | 44 |
electrically responsive cell | 2.04e-09 | 39 |
electrically active cell | 2.04e-09 | 39 |
neuron of cerebral cortex | 4.19e-08 | 6 |