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FFCP PHASE1:Mm9::chr12:86114023..86114033,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:86114023..86114033,-
|DHSsupport=NA
|short_description=p6@Npc2
|DPIdataset=NA
|description=CAGE_peak_6_at_Npc2_5end
|association_with_transcript=28bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end
|EntrezGene=67963
|EntrezGene=67963
|HGNC=
|HGNC=
|MCL_coexpression_id=643
|TSSclassifier=NA
|UniProt=Q9Z0J0
|UniProt=Q9Z0J0
|association_with_transcript=28bp_to_ENSMUST00000021668,NM_023409,uc007oft.1_5end
|cluster_id=chr12:86114023..86114033,-
|description=CAGE_peak_6_at_Npc2_5end
|id=chr12:86114023..86114033,-
|ontology_enrichment_celltype=CL:0000117!3.61e-13!23;CL:0000337!3.61e-13!23;CL:0000221!1.95e-09!44;CL:0000133!1.95e-09!44;CL:0000540!3.40e-09!33;CL:0000047!3.40e-09!33;CL:0000031!3.40e-09!33;CL:0000404!3.40e-09!33;CL:0002319!4.30e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-28,23;CL:0000337,2.81e-28,23;CL:0000540,5.52e-18,33;CL:0000047,5.52e-18,33;CL:0000031,5.52e-18,33;CL:0000404,5.52e-18,33;CL:0002319,3.40e-17,43;CL:0000221,1.17e-16,44;CL:0000133,1.17e-16,44;CL:0000393,2.29e-14,39;CL:0000211,2.29e-14,39;CL:0002609,6.11e-12,6;CL:0002321,3.19e-08,70;CL:0002608,7.52e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.25e-18!52;UBERON:0005068!1.25e-18!52;UBERON:0006241!1.25e-18!52;UBERON:0007135!1.25e-18!52;UBERON:0002346!1.32e-18!71;UBERON:0003075!1.32e-18!71;UBERON:0007284!1.32e-18!71;UBERON:0001017!9.15e-18!73;UBERON:0005743!9.15e-18!73;UBERON:0000033!1.11e-17!63;UBERON:0000073!9.05e-17!75;UBERON:0001016!9.05e-17!75;UBERON:0004121!3.44e-16!102;UBERON:0000924!3.44e-16!102;UBERON:0006601!3.44e-16!102;UBERON:0000955!5.68e-16!50;UBERON:0006238!5.68e-16!50;UBERON:0002616!1.88e-15!49;UBERON:0003056!8.30e-15!49;UBERON:0002020!8.08e-14!34;UBERON:0003080!1.51e-12!40;UBERON:0000153!1.75e-12!94;UBERON:0007811!6.10e-12!86;UBERON:0002780!6.16e-12!39;UBERON:0001890!6.16e-12!39;UBERON:0006240!6.16e-12!39;UBERON:0002791!4.17e-11!29;UBERON:0003528!4.17e-11!29;UBERON:0001893!4.17e-11!29;UBERON:0003076!4.16e-07!12;UBERON:0003057!4.16e-07!12;UBERON:0000956!7.43e-07!21;UBERON:0001869!7.43e-07!21;UBERON:0000203!7.43e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.93e-29,73;UBERON:0000073,2.78e-28,54;UBERON:0001016,7.55e-28,75;UBERON:0001049,8.04e-28,52;UBERON:0005068,8.04e-28,52;UBERON:0006241,8.04e-28,52;UBERON:0007135,8.04e-28,52;UBERON:0002020,3.27e-25,34;UBERON:0002346,4.67e-24,64;UBERON:0003075,4.67e-24,64;UBERON:0007284,4.67e-24,64;UBERON:0000955,7.54e-23,47;UBERON:0006238,7.54e-23,47;UBERON:0004121,1.93e-22,95;UBERON:0000924,1.93e-22,95;UBERON:0006601,1.93e-22,95;UBERON:0002616,1.06e-21,46;UBERON:0003528,1.68e-20,29;UBERON:0002791,1.68e-20,29;UBERON:0001893,1.68e-20,29;UBERON:0010371,5.44e-20,73;UBERON:0003080,2.71e-18,40;UBERON:0002780,5.73e-17,39;UBERON:0001890,5.73e-17,39;UBERON:0006240,5.73e-17,39;UBERON:0003056,1.49e-16,49;UBERON:0010314,4.79e-14,92;UBERON:0000956,8.05e-12,21;UBERON:0001869,8.05e-12,21;UBERON:0000203,8.05e-12,21;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0003076,2.72e-10,12;UBERON:0003057,2.72e-10,12;UBERON:0000369,1.44e-09,5;UBERON:0002435,1.44e-09,5;UBERON:0000204,1.44e-09,5;UBERON:0010082,1.44e-09,5;UBERON:0001954,2.32e-09,7;UBERON:0003022,2.32e-09,7;UBERON:0002421,2.32e-09,7;UBERON:0000349,2.32e-09,7;UBERON:0002600,2.32e-09,7;UBERON:0000025,6.86e-09,114;UBERON:0004111,8.77e-08,122;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0002619,5.08e-07,17
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,1.56478268869608,0.65407546914134,1.31811709640683,0.972149495371417,0.419959264876088,0,0.167782606057736,0,0,0.257259436035947,0,0,3.23706337375356,4.23192783417626,1.90149421051854,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,0,2.28117147078651,3.78016627328734,3.15487442027073,1.42825492201902,1.32521124570968,3.55223317723367,3.1629005436018,2.75765635983006,0,1.40456071893706,1.99688493233117,1.71452174049252,2.28719109006024,1.56274011167028,2.51264699101243,1.12552522006336,0.763991238884051,0.883885756421003,2.70506193518296,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0,0,0.969750506270444,0,0.585561594023094,1.25668024088073,0,0.239630249011841,0,0.127070227073065,2.54644086988199,2.74500361691176,6.78533501409468,1.04294592115366,0.511430914660661,1.0389402227978,1.46017136760982,0.305518091550949,0.373220911830279,1.0108910337347,0,0.910843100738926,0.689706313300419,0.900310649026746,0.60281927134286,0.884474488967262,1.15302348256365,1.21812241927647,0.776110112217047,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0.828503090142008,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.583826711835847,0.16455984991348,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,1.26173969138476,4.93942139420565,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0.569003702859245,0.114248512609729,0,0,0.775809948670503,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.589676985339609,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0,0.488894929326078,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0,0,0,0,0,0.827810238914197,1.28440471990234,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.28528526568723,0.141940085208269,0.890328018336276,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.905510786479282,0.428674070063185,0,0.178368817602071,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.361877549568935,0.477489376012546,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.388844919875379,0,7.32800820289447,0.149516546043979,0.827292452285488,0.194451188344048,0.774958940866387,0.844780627453891,0.58678619322877,0.39061315453185,1.15345278868282,2.41584120826006,5.47257011889944,0.316011120628178,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.120195449519969,0.443068581523732,0.302899349844443,0.533447646584999,0.403304740547362,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0,1.14166082342594,0.798049746802062,2.04880326904961,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.655490552289177,0.832326981263301,0.804096565378586,0,0.231768651889711,0.192909220463705,0.412085900803307,0.883193520806384,2.40008476669791,1.06485483695602,0.476872379894642,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.526139422875686,0.814824683075171,0.561142271657738,0.593175090620871,0.394017929502254,1.63692417267876,1.54936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,1.56478268869608,0.65407546914134,1.31811709640683,0.972149495371417,0.419959264876088,0,0.167782606057736,0,0,0.257259436035947,0,0,3.23706337375356,4.23192783417626,1.90149421051854,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,0,2.28117147078651,3.78016627328734,3.15487442027073,1.42825492201902,1.32521124570968,3.55223317723367,3.1629005436018,2.75765635983006,0,1.40456071893706,1.99688493233117,1.71452174049252,2.28719109006024,1.56274011167028,2.51264699101243,1.12552522006336,0.763991238884051,0.883885756421003,2.70506193518296,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0,0,0.969750506270444,0,0.585561594023094,1.25668024088073,0,0.239630249011841,0,0.127070227073065,2.54644086988199,2.74500361691176,6.78533501409468,1.04294592115366,0.511430914660661,1.0389402227978,1.46017136760982,0.305518091550949,0.373220911830279,1.0108910337347,0,0.910843100738926,0.689706313300419,0.900310649026746,0.60281927134286,0.884474488967262,1.15302348256365,1.21812241927647,0.776110112217047,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0.828503090142008,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.583826711835847,0.16455984991348,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,1.26173969138476,4.93942139420565,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0.569003702859245,0.114248512609729,0,0,0.775809948670503,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0,0.166845105716094,0.589676985339609,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0,0.488894929326078,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0,0,0,0,0,0.827810238914197,1.28440471990234,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.28528526568723,0.141940085208269,0.890328018336276,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.905510786479282,0.428674070063185,0,0.178368817602071,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.361877549568935,0.477489376012546,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.388844919875379,0,7.32800820289447,0.149516546043979,0.827292452285488,0.194451188344048,0.774958940866387,0.844780627453891,0.58678619322877,0.39061315453185,1.15345278868282,2.41584120826006,5.47257011889944,0.316011120628178,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.120195449519969,0.443068581523732,0.302899349844443,0.533447646584999,0.403304740547362,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0,1.14166082342594,0.798049746802062,2.04880326904961,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.655490552289177,0.832326981263301,0.804096565378586,0,0.231768651889711,0.192909220463705,0.412085900803307,0.883193520806384,2.40008476669791,1.06485483695602,0.476872379894642,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.526139422875686,0.814824683075171,0.561142271657738,0.593175090620871,0.394017929502254,1.63692417267876,1.54936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421
|short_description=p6@Npc2
}}
}}

Latest revision as of 22:29, 26 September 2015

Short description:p6@Npc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Npc2_5end
Coexpression cluster:MCL_coexpression_mm9:643
Association with transcript: 28bp_to_ENSMUST00000021668, NM_023409, uc007oft.1_5end
EntrezGene:Npc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Npc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system6.93e-2973
regional part of nervous system2.78e-2854
nervous system7.55e-2875
neural tube8.04e-2852
neural rod8.04e-2852
future spinal cord8.04e-2852
neural keel8.04e-2852
gray matter3.27e-2534
neurectoderm4.67e-2464
neural plate4.67e-2464
presumptive neural plate4.67e-2464
brain7.54e-2347
future brain7.54e-2347
ectoderm-derived structure1.93e-2295
ectoderm1.93e-2295
presumptive ectoderm1.93e-2295
regional part of brain1.06e-2146
brain grey matter1.68e-2029
regional part of telencephalon1.68e-2029
telencephalon1.68e-2029
ecto-epithelium5.44e-2073
anterior neural tube2.71e-1840
regional part of forebrain5.73e-1739
forebrain5.73e-1739
future forebrain5.73e-1739
pre-chordal neural plate1.49e-1649
structure with developmental contribution from neural crest4.79e-1492
cerebral cortex8.05e-1221
cerebral hemisphere8.05e-1221
pallium8.05e-1221
basal ganglion1.41e-108
nuclear complex of neuraxis1.41e-108
aggregate regional part of brain1.41e-108
collection of basal ganglia1.41e-108
cerebral subcortex1.41e-108
posterior neural tube2.72e-1012
chordal neural plate2.72e-1012
corpus striatum1.44e-095
striatum1.44e-095
ventral part of telencephalon1.44e-095
future corpus striatum1.44e-095
Ammon's horn2.32e-097
lobe parts of cerebral cortex2.32e-097
hippocampal formation2.32e-097
limbic system2.32e-097
limbic lobe2.32e-097
tube6.86e-09114
anatomical conduit8.77e-08122
spinal cord1.50e-076
dorsal region element1.50e-076
dorsum1.50e-076
regional part of cerebral cortex5.08e-0717
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