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FFCP PHASE1:Mm9::chr18:31476655..31476695,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19762
|EntrezGene=19762
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F2Z432
|UniProt=F2Z432
|association_with_transcript=69bp_to_ENSMUST00000139924_5end
|association_with_transcript=69bp_to_ENSMUST00000139924_5end
|cluster_id=chr18:31476655..31476695,-
|description=CAGE_peak_2_at_Rit2_5end
|description=CAGE_peak_2_at_Rit2_5end
|id=chr18:31476655..31476695,-
|id=chr18:31476655..31476695,-
|ontology_enrichment_celltype=CL:0000117!1.93e-11!23;CL:0000337!1.93e-11!23;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000393!6.64e-07!39;CL:0000211!6.64e-07!39
|ontology_enrichment_celltype=CL:0000117!1.93e-11!23;CL:0000337!1.93e-11!23;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000393!6.64e-07!39;CL:0000211!6.64e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.32e-10,23;CL:0000337,2.32e-10,23;CL:0000540,6.10e-07,33;CL:0000047,6.10e-07,33;CL:0000031,6.10e-07,33;CL:0000404,6.10e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.21e-31!71;UBERON:0003075!9.21e-31!71;UBERON:0007284!9.21e-31!71;UBERON:0000033!3.37e-26!63;UBERON:0004121!4.82e-26!102;UBERON:0000924!4.82e-26!102;UBERON:0006601!4.82e-26!102;UBERON:0001017!5.18e-25!73;UBERON:0005743!5.18e-25!73;UBERON:0000073!1.97e-24!75;UBERON:0001016!1.97e-24!75;UBERON:0001049!2.82e-24!52;UBERON:0005068!2.82e-24!52;UBERON:0006241!2.82e-24!52;UBERON:0007135!2.82e-24!52;UBERON:0000955!2.69e-23!50;UBERON:0006238!2.69e-23!50;UBERON:0002616!1.44e-22!49;UBERON:0003056!7.00e-22!49;UBERON:0003080!1.29e-18!40;UBERON:0002780!8.68e-18!39;UBERON:0001890!8.68e-18!39;UBERON:0006240!8.68e-18!39;UBERON:0002020!1.77e-16!34;UBERON:0007811!1.12e-13!86;UBERON:0002791!2.40e-13!29;UBERON:0003528!2.40e-13!29;UBERON:0001893!2.40e-13!29;UBERON:0000153!3.60e-12!94;UBERON:0002619!1.89e-08!17;UBERON:0002021!2.29e-08!10;UBERON:0000411!2.29e-08!10;UBERON:0001950!2.29e-08!10;UBERON:0000956!3.27e-08!21;UBERON:0001869!3.27e-08!21;UBERON:0000203!3.27e-08!21;UBERON:0002420!8.90e-07!8;UBERON:0007245!8.90e-07!8;UBERON:0010009!8.90e-07!8;UBERON:0010011!8.90e-07!8;UBERON:0000454!8.90e-07!8
|ontology_enrichment_uberon=UBERON:0002346!9.21e-31!71;UBERON:0003075!9.21e-31!71;UBERON:0007284!9.21e-31!71;UBERON:0000033!3.37e-26!63;UBERON:0004121!4.82e-26!102;UBERON:0000924!4.82e-26!102;UBERON:0006601!4.82e-26!102;UBERON:0001017!5.18e-25!73;UBERON:0005743!5.18e-25!73;UBERON:0000073!1.97e-24!75;UBERON:0001016!1.97e-24!75;UBERON:0001049!2.82e-24!52;UBERON:0005068!2.82e-24!52;UBERON:0006241!2.82e-24!52;UBERON:0007135!2.82e-24!52;UBERON:0000955!2.69e-23!50;UBERON:0006238!2.69e-23!50;UBERON:0002616!1.44e-22!49;UBERON:0003056!7.00e-22!49;UBERON:0003080!1.29e-18!40;UBERON:0002780!8.68e-18!39;UBERON:0001890!8.68e-18!39;UBERON:0006240!8.68e-18!39;UBERON:0002020!1.77e-16!34;UBERON:0007811!1.12e-13!86;UBERON:0002791!2.40e-13!29;UBERON:0003528!2.40e-13!29;UBERON:0001893!2.40e-13!29;UBERON:0000153!3.60e-12!94;UBERON:0002619!1.89e-08!17;UBERON:0002021!2.29e-08!10;UBERON:0000411!2.29e-08!10;UBERON:0001950!2.29e-08!10;UBERON:0000956!3.27e-08!21;UBERON:0001869!3.27e-08!21;UBERON:0000203!3.27e-08!21;UBERON:0002420!8.90e-07!8;UBERON:0007245!8.90e-07!8;UBERON:0010009!8.90e-07!8;UBERON:0010011!8.90e-07!8;UBERON:0000454!8.90e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.53e-27,64;UBERON:0003075,1.53e-27,64;UBERON:0007284,1.53e-27,64;UBERON:0000073,3.12e-26,54;UBERON:0001049,4.02e-24,52;UBERON:0005068,4.02e-24,52;UBERON:0006241,4.02e-24,52;UBERON:0007135,4.02e-24,52;UBERON:0001017,1.68e-23,73;UBERON:0001016,2.09e-22,75;UBERON:0010371,5.26e-22,73;UBERON:0004121,1.15e-20,95;UBERON:0000924,1.15e-20,95;UBERON:0006601,1.15e-20,95;UBERON:0010314,5.82e-20,92;UBERON:0000955,7.70e-20,47;UBERON:0006238,7.70e-20,47;UBERON:0003056,1.73e-19,49;UBERON:0002616,5.56e-19,46;UBERON:0003080,1.59e-16,40;UBERON:0002020,2.25e-16,34;UBERON:0002780,1.49e-15,39;UBERON:0001890,1.49e-15,39;UBERON:0006240,1.49e-15,39;UBERON:0003528,1.71e-12,29;UBERON:0002791,1.71e-12,29;UBERON:0001893,1.71e-12,29;UBERON:0002021,1.28e-10,10;UBERON:0000411,1.28e-10,10;UBERON:0001950,1.28e-10,10;UBERON:0002420,1.65e-08,8;UBERON:0007245,1.65e-08,8;UBERON:0010009,1.65e-08,8;UBERON:0010011,1.65e-08,8;UBERON:0000454,1.65e-08,8;UBERON:0003076,2.39e-08,12;UBERON:0003057,2.39e-08,12;UBERON:0002619,2.05e-07,17
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,11.1274053472779,15.869729378161,6.33831403506179,0,0,0,0,0,0,0,0.622137673850866,0.135005938331691,0,19.9955689082663,29.3755159465646,0.61245399607477,0.670918297127655,0.919218786610021,89.1938636095048,62.9498576759975,68.8157268987971,14.6393779380515,18.1145534332771,19.2737947106001,74.5418607333687,68.6570384238649,59.8969131285096,20.9186295686304,24.4879290974457,19.0127434741807,0,0.453429360640713,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,5.93768556259299,1.04091196059682,1.21786191324856,2.7673859670727,4.6724018571313,5.29149182110672,1.13099932196708,0,0.433798070759735,0,0,0,0,0,67.0468025156443,46.7066156194005,0,0,0,0,80.5873639997946,40.7175536508578,8.67015029578764,33.2004451567248,30.4301394223093,89.1410711160513,50.1325502879371,0,0,0,11.995185785529,0.130120442962704,0.229902104433473,1.44049703844279,2.41127708537144,4.21826294738233,5.12454881139399,4.40398105430725,24.0594134787285,0,0.567318240503458,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,33.6463917702604,8.02655976558419,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,0,0.432276099749388,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.0184197733832,69.9753768955453,0,0,1.26203287766503,0,2.80050417052639,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,32.7747742750243,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,89.5356163132462,0.36012218806262,0.646793418913773,0.857348140126369,1.41872186913819,3.56737635204141,6.2528627828806,10.0473433207818,0,0,0.882113592219848,0,0,0,0,0,0,70.0907641599727,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.418176592028937,0,0.539457385539283,0.578574190077352,0.523511883968059,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0.183151624267265,0,0,32.1908550291728,32.6830917920096,34.3737308063638,38.495112844986,35.6242910280734,37.769694869485,31.7260575108949,40.0785870869556,50.7519498062309,39.3497836931383,0,0.798049746802062,1.36586884603307,2.18796045361465,3.14419743941973,2.20612210140017,4.00044110042907,3.5025959730612,1.60459604795908,2.77966932940177,3.04175159868288,3.77252682772152,3.09016974650612,3.71345883948242,3.0440798546475,2.85776214769844,1.73826488917283,1.73618298417335,2.06042950401653,3.82717192349433,3.42869252385415,2.66213709239006,3.81497903915713,3.0522747492789,3.85848459702856,2.96151127620868,1.82927972872773,4.99832451731901,3.93831930152999,3.36685362994643,2.13543032623513,2.36410757701352,2.45538625901814,2.47898945897546,1.92906610981141,2.99772693525535,2.8071793013449,1.93383948643468,1.53030665655075,0.661774257358546,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3958008802433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,11.1274053472779,15.869729378161,6.33831403506179,0,0,0,0,0,0,0,0.622137673850866,0.135005938331691,0,19.9955689082663,29.3755159465646,0.61245399607477,0.670918297127655,0.919218786610021,89.1938636095048,62.9498576759975,68.8157268987971,14.6393779380515,18.1145534332771,19.2737947106001,74.5418607333687,68.6570384238649,59.8969131285096,20.9186295686304,24.4879290974457,19.0127434741807,0,0.453429360640713,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,5.93768556259299,1.04091196059682,1.21786191324856,2.7673859670727,4.6724018571313,5.29149182110672,1.13099932196708,0,0.433798070759735,0,0,0,0,0,67.0468025156443,46.7066156194005,0,0,0,0,80.5873639997946,40.7175536508578,8.67015029578764,33.2004451567248,30.4301394223093,89.1410711160513,50.1325502879371,0,0,0,11.995185785529,0.130120442962704,0.229902104433473,1.44049703844279,2.41127708537144,4.21826294738233,5.12454881139399,4.40398105430725,24.0594134787285,0,0.567318240503458,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,33.6463917702604,8.02655976558419,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,0,0.432276099749388,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.0184197733832,69.9753768955453,0,0,1.26203287766503,0,2.80050417052639,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,32.7747742750243,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,89.5356163132462,0.36012218806262,0.646793418913773,0.857348140126369,1.41872186913819,3.56737635204141,6.2528627828806,10.0473433207818,0,0,0.882113592219848,0,0,0,0,0,0,70.0907641599727,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.418176592028937,0,0.539457385539283,0.578574190077352,0.523511883968059,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0.183151624267265,0,0,32.1908550291728,32.6830917920096,34.3737308063638,38.495112844986,35.6242910280734,37.769694869485,31.7260575108949,40.0785870869556,50.7519498062309,39.3497836931383,0,0.798049746802062,1.36586884603307,2.18796045361465,3.14419743941973,2.20612210140017,4.00044110042907,3.5025959730612,1.60459604795908,2.77966932940177,3.04175159868288,3.77252682772152,3.09016974650612,3.71345883948242,3.0440798546475,2.85776214769844,1.73826488917283,1.73618298417335,2.06042950401653,3.82717192349433,3.42869252385415,2.66213709239006,3.81497903915713,3.0522747492789,3.85848459702856,2.96151127620868,1.82927972872773,4.99832451731901,3.93831930152999,3.36685362994643,2.13543032623513,2.36410757701352,2.45538625901814,2.47898945897546,1.92906610981141,2.99772693525535,2.8071793013449,1.93383948643468,1.53030665655075,0.661774257358546,0.463735671240843
|short_description=p2@Rit2
|short_description=p2@Rit2
}}
}}

Latest revision as of 03:15, 27 September 2015

Short description:p2@Rit2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rit2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 69bp_to_ENSMUST00000139924_5end
EntrezGene:Rit2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rit2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D389.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F362.95
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D768.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E474.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E568.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B267.05
cerebellum, neonate N30.CNhs11135.1395-42I246.71
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A480.59
corpus striatum, adult.CNhs10487.19-21D840.72
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D533.20
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F289.14
diencephalon, neonate N30.CNhs11201.1388-42B250.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G412.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A224.06
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E833.65
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C287.02
medulla oblongata, neonate N30.CNhs11200.1396-42A369.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G889.54
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C970.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.08
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.32e-1023
neuroblast (sensu Vertebrata)2.32e-1023
neuron6.10e-0733
neuronal stem cell6.10e-0733
neuroblast6.10e-0733
electrically signaling cell6.10e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm1.53e-2764
neural plate1.53e-2764
presumptive neural plate1.53e-2764
regional part of nervous system3.12e-2654
neural tube4.02e-2452
neural rod4.02e-2452
future spinal cord4.02e-2452
neural keel4.02e-2452
central nervous system1.68e-2373
nervous system2.09e-2275
ecto-epithelium5.26e-2273
ectoderm-derived structure1.15e-2095
ectoderm1.15e-2095
presumptive ectoderm1.15e-2095
structure with developmental contribution from neural crest5.82e-2092
brain7.70e-2047
future brain7.70e-2047
pre-chordal neural plate1.73e-1949
regional part of brain5.56e-1946
anterior neural tube1.59e-1640
gray matter2.25e-1634
regional part of forebrain1.49e-1539
forebrain1.49e-1539
future forebrain1.49e-1539
brain grey matter1.71e-1229
regional part of telencephalon1.71e-1229
telencephalon1.71e-1229
occipital lobe1.28e-1010
visual cortex1.28e-1010
neocortex1.28e-1010
basal ganglion1.65e-088
nuclear complex of neuraxis1.65e-088
aggregate regional part of brain1.65e-088
collection of basal ganglia1.65e-088
cerebral subcortex1.65e-088
posterior neural tube2.39e-0812
chordal neural plate2.39e-0812
regional part of cerebral cortex2.05e-0717
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