FFCP PHASE1:Mm9::chr7:89079178..89079197,-: Difference between revisions
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{{FFCP|EntrezGene=29877|HGNC=|MCL_coexpression_id=60|UniProt=Q9JMG7,Q3TR90|association_with_transcript=147bp_to_ENSMUST00000026094,NM_013886,uc009icr.1,uc009ics.1,uc009ict.1_5end|description=CAGE_peak_3_at_Hdgfrp3_5end|id=chr7:89079178..89079197,-|ontology_enrichment_celltype=CL:0000117!1.96e-07!23;CL:0000337!1.96e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.27e-09,23;CL:0000337,3.27e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.68e-17!50;UBERON:0006238!3.68e-17!50;UBERON:0001049!5.35e-17!52;UBERON:0005068!5.35e-17!52;UBERON:0006241!5.35e-17!52;UBERON:0007135!5.35e-17!52;UBERON:0002616!1.74e-16!49;UBERON:0002346!8.18e-16!71;UBERON:0003075!8.18e-16!71;UBERON:0007284!8.18e-16!71;UBERON:0001017!8.26e-16!73;UBERON:0005743!8.26e-16!73;UBERON:0000073!1.32e-15!75;UBERON:0001016!1.32e-15!75;UBERON:0000033!2.82e-15!63;UBERON:0004121!2.49e-14!102;UBERON:0000924!2.49e-14!102;UBERON:0006601!2.49e-14!102;UBERON:0002020!1.01e-13!34;UBERON:0003080!4.14e-13!40;UBERON:0002780!1.58e-12!39;UBERON:0001890!1.58e-12!39;UBERON:0006240!1.58e-12!39;UBERON:0003056!1.92e-12!49;UBERON:0002791!6.39e-12!29;UBERON:0003528!6.39e-12!29;UBERON:0001893!6.39e-12!29;UBERON:0000153!4.21e-10!94;UBERON:0007811!4.80e-09!86;UBERON:0000956!7.93e-08!21;UBERON:0001869!7.93e-08!21;UBERON:0000203!7.93e-08!21;UBERON:0002619!2.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.88e-23,54;UBERON:0001049,5.93e-21,52;UBERON:0005068,5.93e-21,52;UBERON:0006241,5.93e-21,52;UBERON:0007135,5.93e-21,52;UBERON:0000955,5.81e-19,47;UBERON:0006238,5.81e-19,47;UBERON:0001017,1.03e-18,73;UBERON:0002346,1.24e-18,64;UBERON:0003075,1.24e-18,64;UBERON:0007284,1.24e-18,64;UBERON:0002020,1.45e-18,34;UBERON:0002616,5.64e-18,46;UBERON:0001016,8.41e-18,75;UBERON:0003528,1.42e-16,29;UBERON:0002791,1.42e-16,29;UBERON:0001893,1.42e-16,29;UBERON:0003080,3.05e-16,40;UBERON:0010371,1.63e-15,73;UBERON:0003056,1.76e-15,49;UBERON:0002780,2.33e-15,39;UBERON:0001890,2.33e-15,39;UBERON:0006240,2.33e-15,39;UBERON:0004121,8.78e-15,95;UBERON:0000924,8.78e-15,95;UBERON:0006601,8.78e-15,95;UBERON:0000956,5.06e-11,21;UBERON:0001869,5.06e-11,21;UBERON:0000203,5.06e-11,21;UBERON:0002619,2.66e-10,17;UBERON:0010314,4.76e-10,92;UBERON:0002021,1.60e-08,10;UBERON:0000411,1.60e-08,10;UBERON:0001950,1.60e-08,10;UBERON:0000025,1.06e-07,114;UBERON:0004111,5.35e-07,122;UBERON:0002420,6.39e-07,8;UBERON:0007245,6.39e-07,8;UBERON:0010009,6.39e-07,8;UBERON:0010011,6.39e-07,8;UBERON:0000454,6.39e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.422366166455,0,0.34243593645101,0.638177271962691,0.513602189793617,0,0,0.404950534779652,0,0,0,0,1.19060606211498,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,1.10128051297009,1.56478268869608,0.218025156380447,1.31811709640683,1.1665793944457,0.279972843250725,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,2.22548106945558,1.05798195854407,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,1.05162480675691,0.856952953211411,1.32521124570968,3.1847607795888,0.575072826109418,0,4.40463523997555,4.08599481872601,2.91852413186863,3.03338461779446,0.914876436024097,1.56274011167028,2.79182999001381,3.37657566019008,3.20876320331301,1.17851434189467,2.84743361598206,2.23679334990361,0.530083353332288,0.68014404096107,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,0.253359865475099,0,0.34255163915718,1.03575153458869,0.445326417194474,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,0.705532242814229,0.502666365318702,0,1.44599356919912,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0.878342391034642,1.67557365450764,0,0,0,0,2.99581278809645,3.20250421973039,3.39266750704734,3.12883776346098,1.53429274398198,3.1168206683934,2.43361894601636,1.62942982160506,0.373220911830279,0.252722758433675,0.210441855886474,1.17108398666433,0.229902104433473,1.44049703844279,0.452114453507145,1.63287597963187,0.640568601424249,1.12442069471675,0.258703370739016,2.58681591519411,0.945530400839096,1.40760899331159,1.09597866213787,0.556094498451196,0,1.02891068203972,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,1.18372367792605,0.393528463494808,0.154267112887378,0.465067889500816,1.07309360559848,0.934122738937356,0.987359099480883,0.820837320395476,0.56748166682099,0.584799949701329,0.219550115291051,0.268412837520744,2.3131894342054,3.80747065803352,0,0.793351699990633,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.760902504450237,1.42358718463353,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0.758671603812327,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,0.911765658574141,0.442655759869801,0.295220295959204,0.470996183524124,0.2467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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29877 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JMG7,Q3TR90 | |||
|association_with_transcript=147bp_to_ENSMUST00000026094,NM_013886,uc009icr.1,uc009ics.1,uc009ict.1_5end | |||
|cluster_id=chr7:89079178..89079197,- | |||
|description=CAGE_peak_3_at_Hdgfrp3_5end | |||
|id=chr7:89079178..89079197,- | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-07!23;CL:0000337!1.96e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.27e-09,23;CL:0000337,3.27e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.68e-17!50;UBERON:0006238!3.68e-17!50;UBERON:0001049!5.35e-17!52;UBERON:0005068!5.35e-17!52;UBERON:0006241!5.35e-17!52;UBERON:0007135!5.35e-17!52;UBERON:0002616!1.74e-16!49;UBERON:0002346!8.18e-16!71;UBERON:0003075!8.18e-16!71;UBERON:0007284!8.18e-16!71;UBERON:0001017!8.26e-16!73;UBERON:0005743!8.26e-16!73;UBERON:0000073!1.32e-15!75;UBERON:0001016!1.32e-15!75;UBERON:0000033!2.82e-15!63;UBERON:0004121!2.49e-14!102;UBERON:0000924!2.49e-14!102;UBERON:0006601!2.49e-14!102;UBERON:0002020!1.01e-13!34;UBERON:0003080!4.14e-13!40;UBERON:0002780!1.58e-12!39;UBERON:0001890!1.58e-12!39;UBERON:0006240!1.58e-12!39;UBERON:0003056!1.92e-12!49;UBERON:0002791!6.39e-12!29;UBERON:0003528!6.39e-12!29;UBERON:0001893!6.39e-12!29;UBERON:0000153!4.21e-10!94;UBERON:0007811!4.80e-09!86;UBERON:0000956!7.93e-08!21;UBERON:0001869!7.93e-08!21;UBERON:0000203!7.93e-08!21;UBERON:0002619!2.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.88e-23,54;UBERON:0001049,5.93e-21,52;UBERON:0005068,5.93e-21,52;UBERON:0006241,5.93e-21,52;UBERON:0007135,5.93e-21,52;UBERON:0000955,5.81e-19,47;UBERON:0006238,5.81e-19,47;UBERON:0001017,1.03e-18,73;UBERON:0002346,1.24e-18,64;UBERON:0003075,1.24e-18,64;UBERON:0007284,1.24e-18,64;UBERON:0002020,1.45e-18,34;UBERON:0002616,5.64e-18,46;UBERON:0001016,8.41e-18,75;UBERON:0003528,1.42e-16,29;UBERON:0002791,1.42e-16,29;UBERON:0001893,1.42e-16,29;UBERON:0003080,3.05e-16,40;UBERON:0010371,1.63e-15,73;UBERON:0003056,1.76e-15,49;UBERON:0002780,2.33e-15,39;UBERON:0001890,2.33e-15,39;UBERON:0006240,2.33e-15,39;UBERON:0004121,8.78e-15,95;UBERON:0000924,8.78e-15,95;UBERON:0006601,8.78e-15,95;UBERON:0000956,5.06e-11,21;UBERON:0001869,5.06e-11,21;UBERON:0000203,5.06e-11,21;UBERON:0002619,2.66e-10,17;UBERON:0010314,4.76e-10,92;UBERON:0002021,1.60e-08,10;UBERON:0000411,1.60e-08,10;UBERON:0001950,1.60e-08,10;UBERON:0000025,1.06e-07,114;UBERON:0004111,5.35e-07,122;UBERON:0002420,6.39e-07,8;UBERON:0007245,6.39e-07,8;UBERON:0010009,6.39e-07,8;UBERON:0010011,6.39e-07,8;UBERON:0000454,6.39e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.422366166455,0,0.34243593645101,0.638177271962691,0.513602189793617,0,0,0.404950534779652,0,0,0,0,1.19060606211498,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,1.10128051297009,1.56478268869608,0.218025156380447,1.31811709640683,1.1665793944457,0.279972843250725,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,2.22548106945558,1.05798195854407,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,1.05162480675691,0.856952953211411,1.32521124570968,3.1847607795888,0.575072826109418,0,4.40463523997555,4.08599481872601,2.91852413186863,3.03338461779446,0.914876436024097,1.56274011167028,2.79182999001381,3.37657566019008,3.20876320331301,1.17851434189467,2.84743361598206,2.23679334990361,0.530083353332288,0.68014404096107,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,0.253359865475099,0,0.34255163915718,1.03575153458869,0.445326417194474,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,0.705532242814229,0.502666365318702,0,1.44599356919912,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0.878342391034642,1.67557365450764,0,0,0,0,2.99581278809645,3.20250421973039,3.39266750704734,3.12883776346098,1.53429274398198,3.1168206683934,2.43361894601636,1.62942982160506,0.373220911830279,0.252722758433675,0.210441855886474,1.17108398666433,0.229902104433473,1.44049703844279,0.452114453507145,1.63287597963187,0.640568601424249,1.12442069471675,0.258703370739016,2.58681591519411,0.945530400839096,1.40760899331159,1.09597866213787,0.556094498451196,0,1.02891068203972,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,1.18372367792605,0.393528463494808,0.154267112887378,0.465067889500816,1.07309360559848,0.934122738937356,0.987359099480883,0.820837320395476,0.56748166682099,0.584799949701329,0.219550115291051,0.268412837520744,2.3131894342054,3.80747065803352,0,0.793351699990633,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.760902504450237,1.42358718463353,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0.758671603812327,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,0.911765658574141,0.442655759869801,0.295220295959204,0.470996183524124,0.246794327843601,0,0.333690211432188,0,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,1.51593129416388,0.651859905768103,0.169745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0.780534591431195,0.945810864637146,0.44292937929755,1.2756381492599,0,1.03610989119537,0.578596234326046,0,0,0,0.551873492609465,1.60550589987792,2.93029216480508,1.47541450839008,0.252470927204373,0.94652465824877,0.390438744296638,0.861693590931196,1.19484398976276,0.222798674082394,0.566153061577665,0.404810701674894,0,0.790575555893047,3.85585579706168,0.851640511249612,1.24645922567079,1.79175655288934,0.989820737835213,0,0,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,0.258428293168221,1.09060118843252,0,0.632073515871632,0,1.03135543248187,1.70219802876894,0.540183282093931,0.776152102696527,1.71469628025274,0.886701168211368,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0,3.74898276693435,0.8244312647074,1.29171541356724,0.904693873922338,0.835606408021955,0.656563598980245,0.291480836629851,2.22510362412612,0.512612642393558,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0.632671987162271,1.42323626988794,0.756037385752609,1.25452977608681,0.655087691238533,0.134864346384821,0.909188012978695,0,0.388844919875379,0,5.07323644815771,0.598066184175915,0,0.583353565032143,0.645799117388655,1.18269287843545,0.938857909166032,1.17183946359555,2.09718688851422,2.65742532908607,1.44015003128933,0,0.405450430580328,0.616265742988964,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.590758108698309,0.201932899896295,0.533447646584999,0.504130925684203,0.877120926657772,0.384847366561318,0.467507608726276,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.772758376128762,0.750729901804728,0.915758121336325,0.428736758158132,0.501572104035363,2.82375921308533,0.920650473014354,4.58316410751517,2.57779773515531,3.42541259885321,1.5107877947794,4.05013500139084,1.35096360967266,2.71885445390523,4.65984280576638,1.14166082342594,0,2.39027048055788,0.972426868273176,0.838452650511929,1.10306105070008,0.888986911206461,0.206035057238894,0.64183841918363,0.758091635291392,1.77435509923168,0.943131706930381,0.842773567228942,0.704276676453562,0.631790158511746,0.952587382566147,1.73826488917283,1.15745532278223,0.824171801606613,1.32479028120958,0.685738504770831,1.419806449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| |||
|short_description=p3@Hdgfrp3 | |||
}} |
Latest revision as of 04:24, 27 September 2015
Short description: | p3@Hdgfrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hdgfrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 147bp_to_ENSMUST00000026094, NM_013886, uc009icr.1, uc009ics.1, uc009ict.1_5end |
EntrezGene: | Hdgfrp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.27e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.27e-09 | 23 |