Personal tools

FFCP PHASE1:Mm9::chr3:103380056..103380070,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54524
|EntrezGene=54524
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8C8S6,Q3UY13
|UniProt=Q8C8S6,Q3UY13
|association_with_transcript=0bp_to_ENSMUST00000118117,ENSMUST00000118563,uc008qtb.1,uc008qtc.1,uc008qtd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000118117,ENSMUST00000118563,uc008qtb.1,uc008qtc.1,uc008qtd.1_5end
|cluster_id=chr3:103380056..103380070,+
|description=CAGE_peak_1_at_Syt6_5end
|description=CAGE_peak_1_at_Syt6_5end
|id=chr3:103380056..103380070,+
|id=chr3:103380056..103380070,+
|ontology_enrichment_celltype=CL:0000221!2.35e-23!44;CL:0000133!2.35e-23!44;CL:0002319!9.98e-23!43;CL:0000540!7.24e-20!33;CL:0000047!7.24e-20!33;CL:0000031!7.24e-20!33;CL:0000404!7.24e-20!33;CL:0000055!2.34e-17!50;CL:0000393!5.31e-15!39;CL:0000211!5.31e-15!39;CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002321!2.51e-08!70;CL:0000220!2.51e-08!70;CL:0000107!4.85e-08!9
|ontology_enrichment_celltype=CL:0000221!2.35e-23!44;CL:0000133!2.35e-23!44;CL:0002319!9.98e-23!43;CL:0000540!7.24e-20!33;CL:0000047!7.24e-20!33;CL:0000031!7.24e-20!33;CL:0000404!7.24e-20!33;CL:0000055!2.34e-17!50;CL:0000393!5.31e-15!39;CL:0000211!5.31e-15!39;CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002321!2.51e-08!70;CL:0000220!2.51e-08!70;CL:0000107!4.85e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000221,1.18e-31,44;CL:0000133,1.18e-31,44;CL:0002319,1.00e-30,43;CL:0000540,2.42e-29,33;CL:0000047,2.42e-29,33;CL:0000031,2.42e-29,33;CL:0000404,2.42e-29,33;CL:0000393,5.56e-23,39;CL:0000211,5.56e-23,39;CL:0000117,1.58e-18,23;CL:0000337,1.58e-18,23;CL:0002321,9.70e-15,70;CL:0000107,3.22e-11,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.31e-36!75;UBERON:0001016!2.31e-36!75;UBERON:0001017!8.76e-35!73;UBERON:0005743!8.76e-35!73;UBERON:0004121!3.00e-27!102;UBERON:0000924!3.00e-27!102;UBERON:0006601!3.00e-27!102;UBERON:0001049!2.83e-22!52;UBERON:0005068!2.83e-22!52;UBERON:0006241!2.83e-22!52;UBERON:0007135!2.83e-22!52;UBERON:0002346!1.16e-21!71;UBERON:0003075!1.16e-21!71;UBERON:0007284!1.16e-21!71;UBERON:0000033!2.90e-20!63;UBERON:0000955!1.43e-19!50;UBERON:0006238!1.43e-19!50;UBERON:0002616!9.08e-19!49;UBERON:0002020!1.26e-18!34;UBERON:0003056!4.14e-17!49;UBERON:0003080!3.92e-16!40;UBERON:0002791!1.40e-15!29;UBERON:0003528!1.40e-15!29;UBERON:0001893!1.40e-15!29;UBERON:0002780!1.48e-15!39;UBERON:0001890!1.48e-15!39;UBERON:0006240!1.48e-15!39;UBERON:0000956!1.11e-10!21;UBERON:0001869!1.11e-10!21;UBERON:0000203!1.11e-10!21;UBERON:0000010!2.77e-09!11;UBERON:0002619!3.21e-09!17;UBERON:0007811!6.43e-09!86;UBERON:0002410!4.85e-08!9;UBERON:0000153!1.49e-07!94;UBERON:0003076!7.54e-07!12;UBERON:0003057!7.54e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.63e-45,75;UBERON:0001017,8.12e-43,73;UBERON:0004121,1.78e-40,95;UBERON:0000924,1.78e-40,95;UBERON:0006601,1.78e-40,95;UBERON:0002346,6.57e-30,64;UBERON:0003075,6.57e-30,64;UBERON:0007284,6.57e-30,64;UBERON:0010371,7.63e-27,73;UBERON:0001049,3.87e-25,52;UBERON:0005068,3.87e-25,52;UBERON:0006241,3.87e-25,52;UBERON:0007135,3.87e-25,52;UBERON:0000073,4.16e-25,54;UBERON:0002020,1.61e-24,34;UBERON:0000955,4.70e-21,47;UBERON:0006238,4.70e-21,47;UBERON:0003528,4.82e-20,29;UBERON:0002791,4.82e-20,29;UBERON:0001893,4.82e-20,29;UBERON:0002616,5.78e-20,46;UBERON:0003056,8.67e-19,49;UBERON:0010314,8.73e-18,92;UBERON:0003080,2.02e-17,40;UBERON:0002780,1.26e-16,39;UBERON:0001890,1.26e-16,39;UBERON:0006240,1.26e-16,39;UBERON:0000010,4.58e-13,11;UBERON:0000956,6.53e-13,21;UBERON:0001869,6.53e-13,21;UBERON:0000203,6.53e-13,21;UBERON:0002410,3.22e-11,9;UBERON:0002619,1.00e-10,17;UBERON:0011216,5.69e-10,194;UBERON:0002021,1.06e-08,10;UBERON:0000411,1.06e-08,10;UBERON:0001950,1.06e-08,10;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0003076,2.18e-08,12;UBERON:0003057,2.18e-08,12
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.31811709640683,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,6.47412674750713,16.398720357433,9.50747105259269,0,0,0.449949858640699,0,0,1.19840044207362,2.68952813725088,1.34796496001021,2.16009501330705,1.26194976810829,3.99911378165325,3.53389665522582,13.229006315215,11.5014565221884,16.5459381589804,0,2.80912143787413,4.30098293117482,3.82470234417562,6.03818447775904,4.16730696445408,5.862842979029,2.8138130501584,5.65353516774197,5.89257170947335,4.9830088279686,7.26957838718672,5.14938114665652,10.2777321745228,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,4.78867627240714,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0.884610551949874,1.61766849947409,1.32504911076236,0.969750506270444,0,2.04946557908083,1.25668024088073,0,0,0,0,4.49371918214468,12.8100168789215,21.8638572676384,2.9550134432687,2.81287003063364,5.40248915854856,5.51620294430376,0,1.61729061793121,0,0.210441855886474,0,0,0.180062129805349,3.46621081022145,8.57259889306731,12.1708034270607,14.0552586839593,1.03481348295606,0,0.189106080167819,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.92614151141356,0,0,1.2797295032114,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,1.00503754465089,1.19021820443007,1.95133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,4.92289083687253,0,0.252470927204373,14.1978698737316,11.7131623288992,24.9891141370047,14.8160654730582,25.3990488453929,26.6091938941502,8.09621403349789,10.5212108848072,6.32460444714438,63.9429419679396,0.425820255624806,0,0.162886959353576,0,0,2.91336763385978,0.906970670894253,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,2.38307724027652,0,0.388076051348264,0.214337035031592,0.709360934569094,0.891844088010353,0.822745103010605,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,4.45020724825223,0,2.88941615148511,2.77791791054568,0.188368457004691,0,0,0,0.139951452323658,0,0,0.316335993581135,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,4.14292712856459,5.72895513439397,7.21783365843488,2.74033007908257,3.0215755895588,1.35004500046361,3.15224842256954,3.17199686288943,2.07104124700728,0.207574695168353,1.19707462020309,0.170733605754134,1.21553358534147,0.628839487883947,1.47074806760011,0.888986911206461,1.64828045791115,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,1.31098110457835,0.704276676453562,0.861532034334199,0.476293691283074,1.39061191133827,1.15745532278223,1.23625770240992,0.883193520806384,0.342869252385415,0.887379030796687,1.1921809497366,0.436039249896986,0.470546902076653,1.01537529470012,0.73171189149109,0.263069711437843,1.22223702461276,1.12228454331548,1.42362021749009,0.886540341380071,0.818462086339379,0.619747364743864,0.578719832943424,1.49886346762768,1.40358965067245,0.859484216193193,0.956441660344217,0.882365676478062,0.463735671240843
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.31811709640683,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,6.47412674750713,16.398720357433,9.50747105259269,0,0,0.449949858640699,0,0,1.19840044207362,2.68952813725088,1.34796496001021,2.16009501330705,1.26194976810829,3.99911378165325,3.53389665522582,13.229006315215,11.5014565221884,16.5459381589804,0,2.80912143787413,4.30098293117482,3.82470234417562,6.03818447775904,4.16730696445408,5.862842979029,2.8138130501584,5.65353516774197,5.89257170947335,4.9830088279686,7.26957838718672,5.14938114665652,10.2777321745228,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,4.78867627240714,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0.884610551949874,1.61766849947409,1.32504911076236,0.969750506270444,0,2.04946557908083,1.25668024088073,0,0,0,0,4.49371918214468,12.8100168789215,21.8638572676384,2.9550134432687,2.81287003063364,5.40248915854856,5.51620294430376,0,1.61729061793121,0,0.210441855886474,0,0,0.180062129805349,3.46621081022145,8.57259889306731,12.1708034270607,14.0552586839593,1.03481348295606,0,0.189106080167819,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.92614151141356,0,0,1.2797295032114,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,1.00503754465089,1.19021820443007,1.95133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,4.92289083687253,0,0.252470927204373,14.1978698737316,11.7131623288992,24.9891141370047,14.8160654730582,25.3990488453929,26.6091938941502,8.09621403349789,10.5212108848072,6.32460444714438,63.9429419679396,0.425820255624806,0,0.162886959353576,0,0,2.91336763385978,0.906970670894253,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,2.38307724027652,0,0.388076051348264,0.214337035031592,0.709360934569094,0.891844088010353,0.822745103010605,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,4.45020724825223,0,2.88941615148511,2.77791791054568,0.188368457004691,0,0,0,0.139951452323658,0,0,0.316335993581135,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,4.14292712856459,5.72895513439397,7.21783365843488,2.74033007908257,3.0215755895588,1.35004500046361,3.15224842256954,3.17199686288943,2.07104124700728,0.207574695168353,1.19707462020309,0.170733605754134,1.21553358534147,0.628839487883947,1.47074806760011,0.888986911206461,1.64828045791115,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,1.31098110457835,0.704276676453562,0.861532034334199,0.476293691283074,1.39061191133827,1.15745532278223,1.23625770240992,0.883193520806384,0.342869252385415,0.887379030796687,1.1921809497366,0.436039249896986,0.470546902076653,1.01537529470012,0.73171189149109,0.263069711437843,1.22223702461276,1.12228454331548,1.42362021749009,0.886540341380071,0.818462086339379,0.619747364743864,0.578719832943424,1.49886346762768,1.40358965067245,0.859484216193193,0.956441660344217,0.882365676478062,0.463735671240843
|short_description=p1@Syt6
|short_description=p1@Syt6
}}
}}

Latest revision as of 05:22, 27 September 2015

Short description:p1@Syt6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Syt6_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000118117, ENSMUST00000118563, uc008qtb.1, uc008qtc.1, uc008qtd.1_5end
EntrezGene:Syt6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Syt6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F121.86
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C68.57
eyeball, neonate N01.CNhs11140.1532-43E712.17
eyeball, neonate N02.CNhs11205.1551-44G814.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.40
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I963.94
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.63e-4575
central nervous system8.12e-4373
ectoderm-derived structure1.78e-4095
ectoderm1.78e-4095
presumptive ectoderm1.78e-4095
neurectoderm6.57e-3064
neural plate6.57e-3064
presumptive neural plate6.57e-3064
ecto-epithelium7.63e-2773
neural tube3.87e-2552
neural rod3.87e-2552
future spinal cord3.87e-2552
neural keel3.87e-2552
regional part of nervous system4.16e-2554
gray matter1.61e-2434
brain4.70e-2147
future brain4.70e-2147
brain grey matter4.82e-2029
regional part of telencephalon4.82e-2029
telencephalon4.82e-2029
regional part of brain5.78e-2046
pre-chordal neural plate8.67e-1949
structure with developmental contribution from neural crest8.73e-1892
anterior neural tube2.02e-1740
regional part of forebrain1.26e-1639
forebrain1.26e-1639
future forebrain1.26e-1639
peripheral nervous system4.58e-1311
cerebral cortex6.53e-1321
cerebral hemisphere6.53e-1321
pallium6.53e-1321
autonomic nervous system3.22e-119
regional part of cerebral cortex1.00e-1017
organ system subdivision5.69e-10194
occipital lobe1.06e-0810
visual cortex1.06e-0810
neocortex1.06e-0810
basal ganglion1.59e-088
nuclear complex of neuraxis1.59e-088
aggregate regional part of brain1.59e-088
collection of basal ganglia1.59e-088
cerebral subcortex1.59e-088
posterior neural tube2.18e-0812
chordal neural plate2.18e-0812
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:103380056..103380070,%2B&oldid=4294641"