FFCP PHASE1:Mm9::chr6:47194358..47194416,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:47194358..47194416,+
|short_description=p1@Cntnap2
|description=CAGE_peak_1_at_Cntnap2_5end
|association_with_transcript=0bp_to_ENSMUST00000060839,NM_02577...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66797 | |EntrezGene=66797 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CPW0,Q3SYI6 | |UniProt=Q9CPW0,Q3SYI6 | ||
|association_with_transcript=0bp_to_ENSMUST00000060839,NM_025771,uc009bsx.2_5end | |||
|cluster_id=chr6:47194358..47194416,+ | |||
|description=CAGE_peak_1_at_Cntnap2_5end | |||
|id=chr6:47194358..47194416,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.28e-15!23;CL:0000337!5.28e-15!23;CL:0000221!1.96e-08!44;CL:0000133!1.96e-08!44;CL:0002319!4.29e-08!43;CL:0000540!1.56e-07!33;CL:0000047!1.56e-07!33;CL:0000031!1.56e-07!33;CL:0000404!1.56e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.82e-17,23;CL:0000337,5.82e-17,23;CL:0000540,5.43e-09,33;CL:0000047,5.43e-09,33;CL:0000031,5.43e-09,33;CL:0000404,5.43e-09,33;CL:0000221,5.48e-09,44;CL:0000133,5.48e-09,44;CL:0002319,1.32e-08,43;CL:0000393,4.31e-07,39;CL:0000211,4.31e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.33e-28!63;UBERON:0002346!4.72e-26!71;UBERON:0003075!4.72e-26!71;UBERON:0007284!4.72e-26!71;UBERON:0001049!8.51e-26!52;UBERON:0005068!8.51e-26!52;UBERON:0006241!8.51e-26!52;UBERON:0007135!8.51e-26!52;UBERON:0003056!1.96e-25!49;UBERON:0000955!2.55e-24!50;UBERON:0006238!2.55e-24!50;UBERON:0002616!1.42e-23!49;UBERON:0001017!1.59e-22!73;UBERON:0005743!1.59e-22!73;UBERON:0000073!6.02e-22!75;UBERON:0001016!6.02e-22!75;UBERON:0004121!8.56e-22!102;UBERON:0000924!8.56e-22!102;UBERON:0006601!8.56e-22!102;UBERON:0003080!1.43e-20!40;UBERON:0002780!6.39e-20!39;UBERON:0001890!6.39e-20!39;UBERON:0006240!6.39e-20!39;UBERON:0002020!1.25e-18!34;UBERON:0007811!1.39e-16!86;UBERON:0002791!1.38e-15!29;UBERON:0003528!1.38e-15!29;UBERON:0001893!1.38e-15!29;UBERON:0000153!1.88e-15!94;UBERON:0000956!9.15e-11!21;UBERON:0001869!9.15e-11!21;UBERON:0000203!9.15e-11!21;UBERON:0002619!2.45e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.74e-31,64;UBERON:0003075,1.74e-31,64;UBERON:0007284,1.74e-31,64;UBERON:0000073,6.72e-30,54;UBERON:0003056,6.35e-29,49;UBERON:0001049,1.13e-28,52;UBERON:0005068,1.13e-28,52;UBERON:0006241,1.13e-28,52;UBERON:0007135,1.13e-28,52;UBERON:0010371,4.38e-26,73;UBERON:0001017,8.38e-26,73;UBERON:0000955,3.49e-25,47;UBERON:0006238,3.49e-25,47;UBERON:0002616,2.40e-24,46;UBERON:0001016,2.65e-24,75;UBERON:0004121,9.57e-24,95;UBERON:0000924,9.57e-24,95;UBERON:0006601,9.57e-24,95;UBERON:0003080,2.40e-23,40;UBERON:0002780,1.34e-22,39;UBERON:0001890,1.34e-22,39;UBERON:0006240,1.34e-22,39;UBERON:0002020,4.06e-21,34;UBERON:0010314,2.13e-20,92;UBERON:0003528,1.25e-17,29;UBERON:0002791,1.25e-17,29;UBERON:0001893,1.25e-17,29;UBERON:0000956,4.18e-12,21;UBERON:0001869,4.18e-12,21;UBERON:0000203,4.18e-12,21;UBERON:0002619,2.52e-09,17;UBERON:0002420,8.32e-07,8;UBERON:0007245,8.32e-07,8;UBERON:0010009,8.32e-07,8;UBERON:0010011,8.32e-07,8;UBERON:0000454,8.32e-07,8 | |||
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| ||
|short_description=p1@Cntnap2 | |||
}} | }} |
Latest revision as of 06:49, 27 September 2015
Short description: | p1@Cntnap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cntnap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | 0bp_to_ENSMUST00000060839, NM_025771, uc009bsx.2_5end |
EntrezGene: | Cntnap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.82e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.82e-17 | 23 |
neuron | 5.43e-09 | 33 |
neuronal stem cell | 5.43e-09 | 33 |
neuroblast | 5.43e-09 | 33 |
electrically signaling cell | 5.43e-09 | 33 |
ectodermal cell | 5.48e-09 | 44 |
neurectodermal cell | 5.48e-09 | 44 |
neural cell | 1.32e-08 | 43 |
electrically responsive cell | 4.31e-07 | 39 |
electrically active cell | 4.31e-07 | 39 |