FFCP PHASE1:Mm9::chr6:54516454..54516477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69938 | |EntrezGene=69938 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZC8 | |UniProt=Q9CZC8 | ||
|association_with_transcript=5bp_to_ENSMUST00000019268_5end | |association_with_transcript=5bp_to_ENSMUST00000019268_5end | ||
|cluster_id=chr6:54516454..54516477,- | |||
|description=CAGE_peak_2_at_Scrn1_5end | |description=CAGE_peak_2_at_Scrn1_5end | ||
|id=chr6:54516454..54516477,- | |id=chr6:54516454..54516477,- | ||
|ontology_enrichment_celltype=CL:0000221!4.77e-19!44;CL:0000133!4.77e-19!44;CL:0000055!7.89e-19!50;CL:0002319!1.35e-18!43;CL:0000393!2.70e-15!39;CL:0000211!2.70e-15!39;CL:0000540!3.86e-14!33;CL:0000047!3.86e-14!33;CL:0000031!3.86e-14!33;CL:0000404!3.86e-14!33;CL:0000117!2.03e-13!23;CL:0000337!2.03e-13!23;CL:0002321!1.49e-07!70;CL:0000220!1.49e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.21e-22,44;CL:0000133,4.21e-22,44;CL:0002319,1.59e-21,43;CL:0000393,1.43e-17,39;CL:0000211,1.43e-17,39;CL:0000117,7.82e-17,23;CL:0000337,7.82e-17,23;CL:0000540,1.49e-16,33;CL:0000047,1.49e-16,33;CL:0000031,1.49e-16,33;CL:0000404,1.49e-16,33;CL:0002321,2.52e-12,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.80e-36!75;UBERON:0001016!4.80e-36!75;UBERON:0001017!4.76e-35!73;UBERON:0005743!4.76e-35!73;UBERON:0004121!1.26e-33!102;UBERON:0000924!1.26e-33!102;UBERON:0006601!1.26e-33!102;UBERON:0002346!4.45e-30!71;UBERON:0003075!4.45e-30!71;UBERON:0007284!4.45e-30!71;UBERON:0000033!4.62e-28!63;UBERON:0001049!6.18e-27!52;UBERON:0005068!6.18e-27!52;UBERON:0006241!6.18e-27!52;UBERON:0007135!6.18e-27!52;UBERON:0000955!1.13e-26!50;UBERON:0006238!1.13e-26!50;UBERON:0002616!4.75e-26!49;UBERON:0003056!3.04e-23!49;UBERON:0002020!9.50e-21!34;UBERON:0003080!1.40e-20!40;UBERON:0002780!6.25e-20!39;UBERON:0001890!6.25e-20!39;UBERON:0006240!6.25e-20!39;UBERON:0002791!2.01e-18!29;UBERON:0003528!2.01e-18!29;UBERON:0001893!2.01e-18!29;UBERON:0000956!1.16e-13!21;UBERON:0001869!1.16e-13!21;UBERON:0000203!1.16e-13!21;UBERON:0007811!2.90e-13!86;UBERON:0000153!1.85e-11!94;UBERON:0002619!2.01e-11!17;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0000025!7.08e-07!114;UBERON:0003076!7.35e-07!12;UBERON:0003057!7.35e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.21e-42,75;UBERON:0001017,5.94e-41,73;UBERON:0004121,5.79e-39,95;UBERON:0000924,5.79e-39,95;UBERON:0006601,5.79e-39,95;UBERON:0002346,3.68e-36,64;UBERON:0003075,3.68e-36,64;UBERON:0007284,3.68e-36,64;UBERON:0000073,4.67e-34,54;UBERON:0001049,7.22e-32,52;UBERON:0005068,7.22e-32,52;UBERON:0006241,7.22e-32,52;UBERON:0007135,7.22e-32,52;UBERON:0010371,3.90e-31,73;UBERON:0000955,1.18e-28,47;UBERON:0006238,1.18e-28,47;UBERON:0003056,5.20e-28,49;UBERON:0002616,7.08e-28,46;UBERON:0002020,2.74e-26,34;UBERON:0010314,4.61e-26,92;UBERON:0003080,1.54e-24,40;UBERON:0002780,1.04e-23,39;UBERON:0001890,1.04e-23,39;UBERON:0006240,1.04e-23,39;UBERON:0003528,2.74e-23,29;UBERON:0002791,2.74e-23,29;UBERON:0001893,2.74e-23,29;UBERON:0000956,3.80e-17,21;UBERON:0001869,3.80e-17,21;UBERON:0000203,3.80e-17,21;UBERON:0002619,2.92e-14,17;UBERON:0002021,3.51e-09,10;UBERON:0000411,3.51e-09,10;UBERON:0001950,3.51e-09,10;UBERON:0000025,2.61e-08,114;UBERON:0004111,5.04e-08,122;UBERON:0003076,1.22e-07,12;UBERON:0003057,1.22e-07,12;UBERON:0002420,2.96e-07,8;UBERON:0007245,2.96e-07,8;UBERON:0010009,2.96e-07,8;UBERON:0010011,2.96e-07,8;UBERON:0000454,2.96e-07,8 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,2.8064285749853,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,0.550640256485045,0.782391344348039,15.2617609466313,10.9843091367236,15.1655321277941,5.31948402176378,10.062679505548,0,0,0,5.40244815675489,6.30373567865265,4.64104883049698,3.43937983461316,7.40587370980846,6.97214543856797,2.71075625655306,1.77858959222228,0.899899717281399,0,0,3.59520132622086,6.91592949578798,7.8804105354443,12.9605700798423,11.9885227970288,5.99867067247988,6.40518768759679,10.2892271340561,10.6388472830242,15.6267193723704,15.4162233399144,15.0671058940522,15.8214729253931,8.44072241473241,9.60620257825301,6.77187381723788,9.49222196604695,10.1297269805702,14.515833538797,8.2496003932627,5.83723891276322,7.08317894136142,3.86203585999239,3.85414956544606,0,0,0,0,0,0,1.26399978118577,1.1930122580464,1.29893002301434,2.12003744706204,5.49289337129054,2.56652954828636,0,0,0,0,0,0.45673551887624,0,3.11728492036132,0.520455980298408,0.608930956624282,0.461230994512117,1.05505848386836,1.05829836422134,2.13633205260448,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,20.7874365878198,25.5524982312415,0.255457055208591,0,0,0,11.3840885947665,17.8425235099264,20.8586224507355,9.38651329038293,6.39288643325826,12.6750707181332,12.6548185192851,0.611036183101898,0.248813941220186,0,1.26265113531884,1.95180664444056,4.59804208866946,1.62055916824814,1.9591626318643,2.99360596265843,2.69038812598185,4.2165776051878,3.62184719034622,0.431135985865684,0.567318240503458,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.583826711835847,0.329119699826961,0.985004784474571,0.729619285912702,0.584799949701329,0.439100230582101,0.402619256281115,7.14985825118033,8.12946437796347,0,0,0.426576501070468,1.39342003116263,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,0,0.597423819763102,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.420814919341911,0.126473074248515,0.590440591918409,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,0,10.1146871692309,8.43924143463863,0,0,1.57754109708128,1.56175497718655,1.07711698866399,1.67278158566786,0.668396022247182,0.566153061577665,2.83367491172426,1.75353514746787,2.37172666767914,9.96096080907602,0.283880170416537,0.178065603667255,0.651547837414304,1.81467135269789,0,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,0,0,4.76615448055303,1.62054984628179,1.16422815404479,2.57204442037911,0.709360934569094,0.713475270408282,1.48094118541909,1.2178597964584,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.361877549568935,0.238744688006273,0.164140899745061,0.291480836629851,7.78786268444141,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0.790839983952838,0,0,0.209088296014469,0,0.269728692769641,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.897099276263873,1.32366792365678,1.55560950675238,2.97067593998782,2.53434188236167,3.52071715937262,2.8644964665669,2.72634295506848,0.966336483304024,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,1.54551675225752,0.563047426353546,0.36630324853453,0,0.501572104035363,19.2015626489803,18.4130094602871,12.6037012956667,8.93636548187176,16.4419804744954,9.82012066606611,10.1253375034771,13.5096360967266,10.8754178156209,10.8729665467882,1.24544817101012,1.19707462020309,1.53660245178721,0.972426868273176,1.25767897576789,1.2869045591501,1.33348036680969,0.618105171716683,1.28367683836726,2.02157769411038,1.2673964994512,2.45214243801899,1.12369808963859,1.28050304809739,1.43588672389033,0.476293691283074,1.39061191133827,0.964546102318525,1.23625770240992,1.17759136107518,2.05721551431249,1.06485483695602,0.953744759789284,1.88950341622027,1.78807822789128,0.761531471025089,1.46342378298218,0.526139422875686,1.35804113845862,1.68342681497322,1.89816028998679,1.0835493061312,1.22769312950907,1.70430525304563,1.73615949883027,3.2475375131933,1.16965804222704,0.644613162144895,0.382576664137687,1.76473135295612,0.231867835620421 | |phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,2.8064285749853,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,0.550640256485045,0.782391344348039,15.2617609466313,10.9843091367236,15.1655321277941,5.31948402176378,10.062679505548,0,0,0,5.40244815675489,6.30373567865265,4.64104883049698,3.43937983461316,7.40587370980846,6.97214543856797,2.71075625655306,1.77858959222228,0.899899717281399,0,0,3.59520132622086,6.91592949578798,7.8804105354443,12.9605700798423,11.9885227970288,5.99867067247988,6.40518768759679,10.2892271340561,10.6388472830242,15.6267193723704,15.4162233399144,15.0671058940522,15.8214729253931,8.44072241473241,9.60620257825301,6.77187381723788,9.49222196604695,10.1297269805702,14.515833538797,8.2496003932627,5.83723891276322,7.08317894136142,3.86203585999239,3.85414956544606,0,0,0,0,0,0,1.26399978118577,1.1930122580464,1.29893002301434,2.12003744706204,5.49289337129054,2.56652954828636,0,0,0,0,0,0.45673551887624,0,3.11728492036132,0.520455980298408,0.608930956624282,0.461230994512117,1.05505848386836,1.05829836422134,2.13633205260448,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,20.7874365878198,25.5524982312415,0.255457055208591,0,0,0,11.3840885947665,17.8425235099264,20.8586224507355,9.38651329038293,6.39288643325826,12.6750707181332,12.6548185192851,0.611036183101898,0.248813941220186,0,1.26265113531884,1.95180664444056,4.59804208866946,1.62055916824814,1.9591626318643,2.99360596265843,2.69038812598185,4.2165776051878,3.62184719034622,0.431135985865684,0.567318240503458,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.583826711835847,0.329119699826961,0.985004784474571,0.729619285912702,0.584799949701329,0.439100230582101,0.402619256281115,7.14985825118033,8.12946437796347,0,0,0.426576501070468,1.39342003116263,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,0,0.597423819763102,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.420814919341911,0.126473074248515,0.590440591918409,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,0,10.1146871692309,8.43924143463863,0,0,1.57754109708128,1.56175497718655,1.07711698866399,1.67278158566786,0.668396022247182,0.566153061577665,2.83367491172426,1.75353514746787,2.37172666767914,9.96096080907602,0.283880170416537,0.178065603667255,0.651547837414304,1.81467135269789,0,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,0,0,4.76615448055303,1.62054984628179,1.16422815404479,2.57204442037911,0.709360934569094,0.713475270408282,1.48094118541909,1.2178597964584,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.361877549568935,0.238744688006273,0.164140899745061,0.291480836629851,7.78786268444141,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0.790839983952838,0,0,0.209088296014469,0,0.269728692769641,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.897099276263873,1.32366792365678,1.55560950675238,2.97067593998782,2.53434188236167,3.52071715937262,2.8644964665669,2.72634295506848,0.966336483304024,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,1.54551675225752,0.563047426353546,0.36630324853453,0,0.501572104035363,19.2015626489803,18.4130094602871,12.6037012956667,8.93636548187176,16.4419804744954,9.82012066606611,10.1253375034771,13.5096360967266,10.8754178156209,10.8729665467882,1.24544817101012,1.19707462020309,1.53660245178721,0.972426868273176,1.25767897576789,1.2869045591501,1.33348036680969,0.618105171716683,1.28367683836726,2.02157769411038,1.2673964994512,2.45214243801899,1.12369808963859,1.28050304809739,1.43588672389033,0.476293691283074,1.39061191133827,0.964546102318525,1.23625770240992,1.17759136107518,2.05721551431249,1.06485483695602,0.953744759789284,1.88950341622027,1.78807822789128,0.761531471025089,1.46342378298218,0.526139422875686,1.35804113845862,1.68342681497322,1.89816028998679,1.0835493061312,1.22769312950907,1.70430525304563,1.73615949883027,3.2475375131933,1.16965804222704,0.644613162144895,0.382576664137687,1.76473135295612,0.231867835620421 | ||
|short_description=p2@Scrn1 | |short_description=p2@Scrn1 | ||
}} | }} |
Latest revision as of 13:57, 1 October 2015
Short description: | p2@Scrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 5bp_to_ENSMUST00000019268_5end |
EntrezGene: | Scrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.21e-22 | 44 |
neurectodermal cell | 4.21e-22 | 44 |
neural cell | 1.59e-21 | 43 |
electrically responsive cell | 1.43e-17 | 39 |
electrically active cell | 1.43e-17 | 39 |
CNS neuron (sensu Vertebrata) | 7.82e-17 | 23 |
neuroblast (sensu Vertebrata) | 7.82e-17 | 23 |
neuron | 1.49e-16 | 33 |
neuronal stem cell | 1.49e-16 | 33 |
neuroblast | 1.49e-16 | 33 |
electrically signaling cell | 1.49e-16 | 33 |
embryonic cell | 2.52e-12 | 70 |