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FFCP PHASE1:Mm9::chr11:49715305..49715397,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74563
|EntrezGene=74563
|HGNC=
|HGNC=
|MCL_coexpression_id=905
|TSSclassifier=NA
|UniProt=B1ATE5,Q9D300
|UniProt=B1ATE5,Q9D300
|association_with_transcript=0bp_to_ENSMUST00000093141,ENSMUST00000093142,NM_029004,uc007irj.1,uc011xue.1_5end
|association_with_transcript=0bp_to_ENSMUST00000093141,ENSMUST00000093142,NM_029004,uc007irj.1,uc011xue.1_5end
|cluster_id=chr11:49715305..49715397,+
|description=CAGE_peak_1_at_Rasgef1c_5end
|description=CAGE_peak_1_at_Rasgef1c_5end
|id=chr11:49715305..49715397,+
|id=chr11:49715305..49715397,+
|ontology_enrichment_celltype=CL:0000221!3.70e-18!44;CL:0000133!3.70e-18!44;CL:0002319!5.72e-18!43;CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0000055!8.70e-15!50;CL:0000393!5.43e-13!39;CL:0000211!5.43e-13!39;CL:0000117!3.19e-10!23;CL:0000337!3.19e-10!23;CL:0000107!3.44e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000221,4.81e-22,44;CL:0000133,4.81e-22,44;CL:0002319,8.83e-22,43;CL:0000540,6.61e-19,33;CL:0000047,6.61e-19,33;CL:0000031,6.61e-19,33;CL:0000404,6.61e-19,33;CL:0000393,2.42e-16,39;CL:0000211,2.42e-16,39;CL:0000117,3.37e-12,23;CL:0000337,3.37e-12,23;CL:0002321,7.21e-10,70;CL:0000107,3.77e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.25e-31!75;UBERON:0001016!2.25e-31!75;UBERON:0001017!7.57e-30!73;UBERON:0005743!7.57e-30!73;UBERON:0004121!4.14e-27!102;UBERON:0000924!4.14e-27!102;UBERON:0006601!4.14e-27!102;UBERON:0002346!2.61e-19!71;UBERON:0003075!2.61e-19!71;UBERON:0007284!2.61e-19!71;UBERON:0001049!4.84e-18!52;UBERON:0005068!4.84e-18!52;UBERON:0006241!4.84e-18!52;UBERON:0007135!4.84e-18!52;UBERON:0000955!1.45e-16!50;UBERON:0006238!1.45e-16!50;UBERON:0002020!4.58e-16!34;UBERON:0002616!5.95e-16!49;UBERON:0000033!8.45e-15!63;UBERON:0003080!2.95e-13!40;UBERON:0002791!4.48e-13!29;UBERON:0003528!4.48e-13!29;UBERON:0001893!4.48e-13!29;UBERON:0002780!5.74e-13!39;UBERON:0001890!5.74e-13!39;UBERON:0006240!5.74e-13!39;UBERON:0003056!3.88e-12!49;UBERON:0000956!7.72e-09!21;UBERON:0001869!7.72e-09!21;UBERON:0000203!7.72e-09!21;UBERON:0002619!8.29e-09!17;UBERON:0000010!1.85e-08!11;UBERON:0002021!5.08e-08!10;UBERON:0000411!5.08e-08!10;UBERON:0001950!5.08e-08!10;UBERON:0002410!3.44e-07!9;UBERON:0000468!6.43e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.35e-37,75;UBERON:0001017,2.28e-35,73;UBERON:0004121,1.37e-27,95;UBERON:0000924,1.37e-27,95;UBERON:0006601,1.37e-27,95;UBERON:0000073,1.51e-21,54;UBERON:0001049,2.43e-20,52;UBERON:0005068,2.43e-20,52;UBERON:0006241,2.43e-20,52;UBERON:0007135,2.43e-20,52;UBERON:0002346,1.75e-19,64;UBERON:0003075,1.75e-19,64;UBERON:0007284,1.75e-19,64;UBERON:0002020,4.39e-19,34;UBERON:0000955,1.03e-16,47;UBERON:0006238,1.03e-16,47;UBERON:0002616,5.96e-16,46;UBERON:0010371,1.22e-15,73;UBERON:0003528,3.83e-15,29;UBERON:0002791,3.83e-15,29;UBERON:0001893,3.83e-15,29;UBERON:0003080,8.89e-14,40;UBERON:0002780,2.13e-13,39;UBERON:0001890,2.13e-13,39;UBERON:0006240,2.13e-13,39;UBERON:0010314,5.95e-12,92;UBERON:0003056,3.35e-11,49;UBERON:0000010,7.43e-11,11;UBERON:0002619,2.02e-10,17;UBERON:0002021,2.88e-10,10;UBERON:0000411,2.88e-10,10;UBERON:0001950,2.88e-10,10;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0002410,3.77e-09,9;UBERON:0003076,1.67e-07,12;UBERON:0003057,1.67e-07,12;UBERON:0002420,4.62e-07,8;UBERON:0007245,4.62e-07,8;UBERON:0010009,4.62e-07,8;UBERON:0010011,4.62e-07,8;UBERON:0000454,4.62e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,3.06155844543851,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,7.84890562969608,0.878744730937887,1.74986909166855,1.95980990275508,4.31257693094915,0,0,0.336093799142464,2.82985379639542,2.29226751951005,0.515672092277442,12.9482534950143,19.5726662330652,15.2119536841483,0.338844532069132,0,0,0,0,5.69240209984969,3.07374644257244,0.311068836925433,1.35005938331691,0.630974884054146,17.424710048632,17.2277461942259,2.69479758272899,1.34183659425531,2.75765635983006,5.50579404996943,3.83062014255563,4.6081959976873,15.0350368012421,13.0827330351446,18.2319679694866,6.14202597803038,18.0084035210138,11.1542720877071,20.9186295686304,18.0812034614861,15.0983551118493,17.7199292399651,31.4377690044228,0,0,0.679971333707751,0.539703191637817,0,0,0.842666520790511,0,0,0,1.83096445709685,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.742210695324124,0.520455980298408,1.52232739156071,0.922461989024234,1.80867168663147,2.58695155698551,0.753999547978053,0,0.86759614151947,0.884610551949874,1.29413479957927,0,0,1.86391761218122,4.09893115816166,6.91174132484402,0.255457055208591,0,0,0,2.54644086988199,11.4375150704657,12.942398267625,23.8139318663419,23.2701066170601,5.194701113989,10.2211995732687,0.407357455401265,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.452114453507145,1.63287597963187,0.768682321709099,1.78033276663485,1.55222022443409,0,0.189106080167819,0.703804496655795,0,0,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.56748166682099,0.584799949701329,0,0.536825675041487,1.05144974282064,6.27718135513635,0,0.528901133327089,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.823494773620054,1.00534083520108,0.596869416123452,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.637819074629948,0.491589944147214,0.518054945597687,0.144649058581512,0,0.54390568381871,0,0,3.21101179975584,4.21962071731931,0,1.76729649043061,11.9893123378178,7.41833614163613,34.0368968417822,62.8487938615212,70.8499783582013,97.6614031221472,24.2886421004937,16.6585839009448,27.6701444562566,18.9579576688866,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0,0.388076051348264,0.643011105094777,0.532020700926821,1.42695054081656,0.987294123612726,3.04464949114599,0,0,1.10264199027481,0.65954501176592,0.968786560175433,0.120625849856312,0.238744688006273,0.328281799490123,0.582961673259701,4.63563255026274,0.512612642393558,0,0,0.753473828018764,0.546776910884101,0.915112692826091,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.826534557253359,2.6175594198403,0.648074866458964,0,0.56369293868419,1.94371509857172,2.31641886639937,4.4723773319131,3.09983576346555,4.22390313726945,3.87278887530988,9.50492009360836,4.71867049915699,0,1.15212002503146,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0.167884616364078,0.772758376128762,0,0.549454872801795,0.857473516316263,0.501572104035363,20.8958181768315,23.476587061866,15.4681788628637,29.3868941807706,30.1436308699083,41.5466643564335,29.0259675099676,23.8670237708837,25.8291173120997,30.5478583933574,0.93408612825759,0.798049746802062,1.70733605754134,0.729320151204882,2.09613162627982,2.5738091183002,2.889207461421,1.64828045791115,2.24643446714271,3.28506375292937,2.02783439912192,1.69763707247469,2.1537546718073,2.81710670581425,2.1825478203133,1.90517476513229,3.70829843023538,2.50781986602817,0.824171801606613,1.76638704161277,3.42869252385415,1.4198064492747,2.38436189947321,4.79643174886684,1.78807822789128,2.62305284464197,2.37806364734604,1.8414879800649,2.58027816307137,0.561142271657738,2.84724043498018,3.64466584789585,2.86461730218783,1.85924209423159,2.12197272079256,4.74640098082097,0.935726433781634,2.14871054048298,1.53030665655075,1.54413993383661,1.39120701372253
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,3.06155844543851,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,7.84890562969608,0.878744730937887,1.74986909166855,1.95980990275508,4.31257693094915,0,0,0.336093799142464,2.82985379639542,2.29226751951005,0.515672092277442,12.9482534950143,19.5726662330652,15.2119536841483,0.338844532069132,0,0,0,0,5.69240209984969,3.07374644257244,0.311068836925433,1.35005938331691,0.630974884054146,17.424710048632,17.2277461942259,2.69479758272899,1.34183659425531,2.75765635983006,5.50579404996943,3.83062014255563,4.6081959976873,15.0350368012421,13.0827330351446,18.2319679694866,6.14202597803038,18.0084035210138,11.1542720877071,20.9186295686304,18.0812034614861,15.0983551118493,17.7199292399651,31.4377690044228,0,0,0.679971333707751,0.539703191637817,0,0,0.842666520790511,0,0,0,1.83096445709685,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.742210695324124,0.520455980298408,1.52232739156071,0.922461989024234,1.80867168663147,2.58695155698551,0.753999547978053,0,0.86759614151947,0.884610551949874,1.29413479957927,0,0,1.86391761218122,4.09893115816166,6.91174132484402,0.255457055208591,0,0,0,2.54644086988199,11.4375150704657,12.942398267625,23.8139318663419,23.2701066170601,5.194701113989,10.2211995732687,0.407357455401265,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.452114453507145,1.63287597963187,0.768682321709099,1.78033276663485,1.55222022443409,0,0.189106080167819,0.703804496655795,0,0,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.56748166682099,0.584799949701329,0,0.536825675041487,1.05144974282064,6.27718135513635,0,0.528901133327089,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.823494773620054,1.00534083520108,0.596869416123452,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.637819074629948,0.491589944147214,0.518054945597687,0.144649058581512,0,0.54390568381871,0,0,3.21101179975584,4.21962071731931,0,1.76729649043061,11.9893123378178,7.41833614163613,34.0368968417822,62.8487938615212,70.8499783582013,97.6614031221472,24.2886421004937,16.6585839009448,27.6701444562566,18.9579576688866,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0,0.388076051348264,0.643011105094777,0.532020700926821,1.42695054081656,0.987294123612726,3.04464949114599,0,0,1.10264199027481,0.65954501176592,0.968786560175433,0.120625849856312,0.238744688006273,0.328281799490123,0.582961673259701,4.63563255026274,0.512612642393558,0,0,0.753473828018764,0.546776910884101,0.915112692826091,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.826534557253359,2.6175594198403,0.648074866458964,0,0.56369293868419,1.94371509857172,2.31641886639937,4.4723773319131,3.09983576346555,4.22390313726945,3.87278887530988,9.50492009360836,4.71867049915699,0,1.15212002503146,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0.167884616364078,0.772758376128762,0,0.549454872801795,0.857473516316263,0.501572104035363,20.8958181768315,23.476587061866,15.4681788628637,29.3868941807706,30.1436308699083,41.5466643564335,29.0259675099676,23.8670237708837,25.8291173120997,30.5478583933574,0.93408612825759,0.798049746802062,1.70733605754134,0.729320151204882,2.09613162627982,2.5738091183002,2.889207461421,1.64828045791115,2.24643446714271,3.28506375292937,2.02783439912192,1.69763707247469,2.1537546718073,2.81710670581425,2.1825478203133,1.90517476513229,3.70829843023538,2.50781986602817,0.824171801606613,1.76638704161277,3.42869252385415,1.4198064492747,2.38436189947321,4.79643174886684,1.78807822789128,2.62305284464197,2.37806364734604,1.8414879800649,2.58027816307137,0.561142271657738,2.84724043498018,3.64466584789585,2.86461730218783,1.85924209423159,2.12197272079256,4.74640098082097,0.935726433781634,2.14871054048298,1.53030665655075,1.54413993383661,1.39120701372253
|short_description=p1@Rasgef1c
|short_description=p1@Rasgef1c
}}
}}

Latest revision as of 14:38, 1 October 2015

Short description:p1@Rasgef1c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rasgef1c_5end
Coexpression cluster:MCL_coexpression_mm9:905
Association with transcript: 0bp_to_ENSMUST00000093141, ENSMUST00000093142, NM_029004, uc007irj.1, uc011xue.1_5end
EntrezGene:Rasgef1c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rasgef1c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C312.95
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.10
Mouse Schwann, donor1.CNhs12507.11728-123D917.72
Mouse Schwann, donor2.CNhs12573.11746-123F931.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D523.81
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E334.04
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D762.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D870.85
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D997.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.67
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I49.50
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.35e-3775
central nervous system2.28e-3573
ectoderm-derived structure1.37e-2795
ectoderm1.37e-2795
presumptive ectoderm1.37e-2795
regional part of nervous system1.51e-2154
neural tube2.43e-2052
neural rod2.43e-2052
future spinal cord2.43e-2052
neural keel2.43e-2052
neurectoderm1.75e-1964
neural plate1.75e-1964
presumptive neural plate1.75e-1964
gray matter4.39e-1934
brain1.03e-1647
future brain1.03e-1647
regional part of brain5.96e-1646
ecto-epithelium1.22e-1573
brain grey matter3.83e-1529
regional part of telencephalon3.83e-1529
telencephalon3.83e-1529
anterior neural tube8.89e-1440
regional part of forebrain2.13e-1339
forebrain2.13e-1339
future forebrain2.13e-1339
structure with developmental contribution from neural crest5.95e-1292
pre-chordal neural plate3.35e-1149
peripheral nervous system7.43e-1111
regional part of cerebral cortex2.02e-1017
occipital lobe2.88e-1010
visual cortex2.88e-1010
neocortex2.88e-1010
cerebral cortex1.33e-0921
cerebral hemisphere1.33e-0921
pallium1.33e-0921
autonomic nervous system3.77e-099
posterior neural tube1.67e-0712
chordal neural plate1.67e-0712
basal ganglion4.62e-078
nuclear complex of neuraxis4.62e-078
aggregate regional part of brain4.62e-078
collection of basal ganglia4.62e-078
cerebral subcortex4.62e-078
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