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FFCP PHASE1:Mm9::chr8:121970938..121971035,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:121970938..121971035,+
|DHSsupport=NA
|short_description=p1@Necab2
|DPIdataset=NA
|description=CAGE_peak_1_at_Necab2_5end
|association_with_transcript=319bp_to_ENSMUST00000098363,NM_054095,uc009npq.1_5end
|EntrezGene=117148
|EntrezGene=117148
|HGNC=
|HGNC=
|MCL_coexpression_id=2959
|TSSclassifier=NA
|UniProt=Q91ZP9
|UniProt=Q91ZP9
|association_with_transcript=319bp_to_ENSMUST00000098363,NM_054095,uc009npq.1_5end
|cluster_id=chr8:121970938..121971035,+
|description=CAGE_peak_1_at_Necab2_5end
|id=chr8:121970938..121971035,+
|ontology_enrichment_celltype=CL:0000117!2.33e-13!23;CL:0000337!2.33e-13!23;CL:0000221!1.60e-09!44;CL:0000133!1.60e-09!44;CL:0002319!3.06e-09!43;CL:0000540!8.12e-09!33;CL:0000047!8.12e-09!33;CL:0000031!8.12e-09!33;CL:0000404!8.12e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-15,23;CL:0000337,1.01e-15,23;CL:0000221,1.16e-09,44;CL:0000133,1.16e-09,44;CL:0000540,2.20e-09,33;CL:0000047,2.20e-09,33;CL:0000031,2.20e-09,33;CL:0000404,2.20e-09,33;CL:0002319,2.61e-09,43;CL:0000393,8.62e-07,39;CL:0000211,8.62e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.49e-32!71;UBERON:0003075!5.49e-32!71;UBERON:0007284!5.49e-32!71;UBERON:0000033!1.58e-28!63;UBERON:0004121!1.21e-27!102;UBERON:0000924!1.21e-27!102;UBERON:0006601!1.21e-27!102;UBERON:0001049!2.68e-26!52;UBERON:0005068!2.68e-26!52;UBERON:0006241!2.68e-26!52;UBERON:0007135!2.68e-26!52;UBERON:0001017!2.82e-26!73;UBERON:0005743!2.82e-26!73;UBERON:0000073!7.33e-26!75;UBERON:0001016!7.33e-26!75;UBERON:0003056!5.81e-25!49;UBERON:0000955!9.30e-25!50;UBERON:0006238!9.30e-25!50;UBERON:0002616!4.82e-24!49;UBERON:0003080!4.52e-20!40;UBERON:0002780!1.95e-19!39;UBERON:0001890!1.95e-19!39;UBERON:0006240!1.95e-19!39;UBERON:0002020!4.64e-18!34;UBERON:0002791!2.21e-14!29;UBERON:0003528!2.21e-14!29;UBERON:0001893!2.21e-14!29;UBERON:0007811!5.00e-14!86;UBERON:0000153!8.54e-13!94;UBERON:0000956!5.25e-09!21;UBERON:0001869!5.25e-09!21;UBERON:0000203!5.25e-09!21;UBERON:0002619!1.16e-08!17;UBERON:0002420!5.97e-07!8;UBERON:0007245!5.97e-07!8;UBERON:0010009!5.97e-07!8;UBERON:0010011!5.97e-07!8;UBERON:0000454!5.97e-07!8;UBERON:0003076!9.33e-07!12;UBERON:0003057!9.33e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.30e-35,64;UBERON:0003075,4.30e-35,64;UBERON:0007284,4.30e-35,64;UBERON:0000073,2.67e-33,54;UBERON:0003056,3.08e-31,49;UBERON:0001049,4.95e-31,52;UBERON:0005068,4.95e-31,52;UBERON:0006241,4.95e-31,52;UBERON:0007135,4.95e-31,52;UBERON:0010371,2.09e-30,73;UBERON:0001017,3.80e-30,73;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0001016,9.44e-29,75;UBERON:0010314,2.70e-27,92;UBERON:0000955,4.84e-26,47;UBERON:0006238,4.84e-26,47;UBERON:0002616,3.90e-25,46;UBERON:0003080,9.79e-25,40;UBERON:0002780,6.77e-24,39;UBERON:0001890,6.77e-24,39;UBERON:0006240,6.77e-24,39;UBERON:0002020,5.07e-22,34;UBERON:0003528,3.46e-17,29;UBERON:0002791,3.46e-17,29;UBERON:0001893,3.46e-17,29;UBERON:0002619,4.75e-11,17;UBERON:0000956,3.48e-10,21;UBERON:0001869,3.48e-10,21;UBERON:0000203,3.48e-10,21;UBERON:0002420,9.05e-09,8;UBERON:0007245,9.05e-09,8;UBERON:0010009,9.05e-09,8;UBERON:0010011,9.05e-09,8;UBERON:0000454,9.05e-09,8;UBERON:0002021,4.72e-08,10;UBERON:0000411,4.72e-08,10;UBERON:0001950,4.72e-08,10;UBERON:0001894,1.36e-07,10;UBERON:0006222,1.36e-07,10;UBERON:0000970,4.45e-07,9;UBERON:0000019,4.45e-07,9;UBERON:0000047,4.45e-07,9;UBERON:0010312,4.45e-07,9;UBERON:0004088,4.45e-07,9;UBERON:0002104,4.45e-07,9;UBERON:0001456,4.45e-07,9;UBERON:0003072,4.45e-07,9;UBERON:0004128,4.45e-07,9;UBERON:0003071,4.45e-07,9;UBERON:0002240,5.88e-07,6;UBERON:0005174,5.88e-07,6;UBERON:0001137,5.88e-07,6;UBERON:0000020,8.77e-07,12;UBERON:0001032,8.77e-07,12;UBERON:0004456,8.77e-07,12;UBERON:0003076,9.64e-07,12;UBERON:0003057,9.64e-07,12
|phase1_expression=2.08193501236232,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.52617609466313,1.31811709640683,1.94429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0,0,16.1853168687678,22.7466121086974,19.6487735086916,0.338844532069132,0,0,0,0,2.39680088414724,1.92109152660777,0.622137673850866,0.270011876663381,1.05162480675691,27.9937964715728,27.6085676189517,2.32732518508413,2.77951865952885,1.83843757322004,16.5173821499083,40.2215114968341,26.7275367865864,25.3221672441972,27.2633177935181,20.3156214517136,19.821992929098,29.826418331679,21.2389564409766,25.3380583507354,28.4743361598206,21.2495368240843,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,7.11066703153331,0,0,0,1.02765491747154,0,3.85949561568544,5.55153045651635,6.08930956624282,5.07354093963329,4.22023393547343,4.11560474974967,2.01066546127481,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,10.7849260371472,79.1476042876224,9.80103946480342,14.0797699355744,12.7857728665165,36.7784838870421,43.1561759760235,0.203678727700633,0.124406970610093,0.252722758433675,2.52530227063769,17.4361393570023,10.3455946995063,6.84236093260327,7.53524089178575,5.8511389270142,4.74020765053944,4.31027932974753,6.72628763921441,0.646703978798527,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3421842906181,7.71784592844633,0,0,0.213288250535234,1.16118335930219,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,1.13800740571849,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4495530989013,15.8235776899474,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,17.3513510867776,0.141940085208269,0.890328018336276,0.977321756121456,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,9.87274856685985,5.04171063287669,2.71653235943784,1.71469628025274,3.54680467284547,5.88617098086833,6.58196082408484,5.17590413494819,0.23467170806371,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,1.31017538247707,0.404593039154462,0.661227645802687,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0.583353565032143,1.03327858782185,0.844780627453891,0.469428954583016,0.13020438484395,1.36317147753424,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,2.9605572681127,1.00730769818447,0.19318959403219,0,0.36630324853453,0,0,11.8597886949584,8.28585425712918,5.15605962095457,9.10821866421544,4.11049511862385,7.55393897389701,5.40018000185445,6.75481804836331,7.70342095273148,9.31968561153276,2.69847103718859,3.99024873401031,1.53660245178721,1.94485373654635,3.5634237646757,4.22840069435032,1.77797382241292,1.64828045791115,1.60459604795908,4.29585259998456,1.52087579934144,2.26351609663291,2.90288673156635,2.04880487695582,2.1825478203133,1.42888107384922,2.43357084484197,2.70072908649187,1.23625770240992,1.47198920134397,1.37147700954166,2.30718548007139,0.953744759789284,1.74415699958794,1.41164070622996,1.86152137361688,2.37806364734604,1.05227884575137,1.62964936615034,0.561142271657738,1.66089025373844,3.34915240076916,0.409231043169689,3.71848418846318,1.35034627686799,5.74564329257276,0.935726433781634,2.14871054048298,0.765153328275374,0.661774257358546,0.231867835620421
|phase1_expression=2.08193501236232,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.52617609466313,1.31811709640683,1.94429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0,0,16.1853168687678,22.7466121086974,19.6487735086916,0.338844532069132,0,0,0,0,2.39680088414724,1.92109152660777,0.622137673850866,0.270011876663381,1.05162480675691,27.9937964715728,27.6085676189517,2.32732518508413,2.77951865952885,1.83843757322004,16.5173821499083,40.2215114968341,26.7275367865864,25.3221672441972,27.2633177935181,20.3156214517136,19.821992929098,29.826418331679,21.2389564409766,25.3380583507354,28.4743361598206,21.2495368240843,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,7.11066703153331,0,0,0,1.02765491747154,0,3.85949561568544,5.55153045651635,6.08930956624282,5.07354093963329,4.22023393547343,4.11560474974967,2.01066546127481,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,10.7849260371472,79.1476042876224,9.80103946480342,14.0797699355744,12.7857728665165,36.7784838870421,43.1561759760235,0.203678727700633,0.124406970610093,0.252722758433675,2.52530227063769,17.4361393570023,10.3455946995063,6.84236093260327,7.53524089178575,5.8511389270142,4.74020765053944,4.31027932974753,6.72628763921441,0.646703978798527,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3421842906181,7.71784592844633,0,0,0.213288250535234,1.16118335930219,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,1.13800740571849,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4495530989013,15.8235776899474,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,17.3513510867776,0.141940085208269,0.890328018336276,0.977321756121456,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,9.87274856685985,5.04171063287669,2.71653235943784,1.71469628025274,3.54680467284547,5.88617098086833,6.58196082408484,5.17590413494819,0.23467170806371,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,1.31017538247707,0.404593039154462,0.661227645802687,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0.583353565032143,1.03327858782185,0.844780627453891,0.469428954583016,0.13020438484395,1.36317147753424,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,2.9605572681127,1.00730769818447,0.19318959403219,0,0.36630324853453,0,0,11.8597886949584,8.28585425712918,5.15605962095457,9.10821866421544,4.11049511862385,7.55393897389701,5.40018000185445,6.75481804836331,7.70342095273148,9.31968561153276,2.69847103718859,3.99024873401031,1.53660245178721,1.94485373654635,3.5634237646757,4.22840069435032,1.77797382241292,1.64828045791115,1.60459604795908,4.29585259998456,1.52087579934144,2.26351609663291,2.90288673156635,2.04880487695582,2.1825478203133,1.42888107384922,2.43357084484197,2.70072908649187,1.23625770240992,1.47198920134397,1.37147700954166,2.30718548007139,0.953744759789284,1.74415699958794,1.41164070622996,1.86152137361688,2.37806364734604,1.05227884575137,1.62964936615034,0.561142271657738,1.66089025373844,3.34915240076916,0.409231043169689,3.71848418846318,1.35034627686799,5.74564329257276,0.935726433781634,2.14871054048298,0.765153328275374,0.661774257358546,0.231867835620421
|short_description=p1@Necab2
}}
}}

Latest revision as of 14:52, 1 October 2015

Short description:p1@Necab2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Necab2_5end
Coexpression cluster:MCL_coexpression_mm9:2959
Association with transcript: 319bp_to_ENSMUST00000098363, NM_054095, uc009npq.1_5end
EntrezGene:Necab2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Necab2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.34
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.25
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D879.15
corpus striatum, neonate N00.CNhs11226.630-43F19.80
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F236.78
diencephalon, neonate N30.CNhs11201.1388-42B243.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C617.44
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.34
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.01e-1523
neuroblast (sensu Vertebrata)1.01e-1523
ectodermal cell1.16e-0944
neurectodermal cell1.16e-0944
neuron2.20e-0933
neuronal stem cell2.20e-0933
neuroblast2.20e-0933
electrically signaling cell2.20e-0933
neural cell2.61e-0943
electrically responsive cell8.62e-0739
electrically active cell8.62e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm4.30e-3564
neural plate4.30e-3564
presumptive neural plate4.30e-3564
regional part of nervous system2.67e-3354
pre-chordal neural plate3.08e-3149
neural tube4.95e-3152
neural rod4.95e-3152
future spinal cord4.95e-3152
neural keel4.95e-3152
ecto-epithelium2.09e-3073
central nervous system3.80e-3073
ectoderm-derived structure1.15e-2995
ectoderm1.15e-2995
presumptive ectoderm1.15e-2995
nervous system9.44e-2975
structure with developmental contribution from neural crest2.70e-2792
brain4.84e-2647
future brain4.84e-2647
regional part of brain3.90e-2546
anterior neural tube9.79e-2540
regional part of forebrain6.77e-2439
forebrain6.77e-2439
future forebrain6.77e-2439
gray matter5.07e-2234
brain grey matter3.46e-1729
regional part of telencephalon3.46e-1729
telencephalon3.46e-1729
regional part of cerebral cortex4.75e-1117
cerebral cortex3.48e-1021
cerebral hemisphere3.48e-1021
pallium3.48e-1021
basal ganglion9.05e-098
nuclear complex of neuraxis9.05e-098
aggregate regional part of brain9.05e-098
collection of basal ganglia9.05e-098
cerebral subcortex9.05e-098
occipital lobe4.72e-0810
visual cortex4.72e-0810
neocortex4.72e-0810
diencephalon1.36e-0710
future diencephalon1.36e-0710
eye4.45e-079
camera-type eye4.45e-079
simple eye4.45e-079
immature eye4.45e-079
ocular region4.45e-079
visual system4.45e-079
face4.45e-079
optic cup4.45e-079
optic vesicle4.45e-079
eye primordium4.45e-079
spinal cord5.88e-076
dorsal region element5.88e-076
dorsum5.88e-076
sense organ8.77e-0712
sensory system8.77e-0712
entire sense organ system8.77e-0712
posterior neural tube9.64e-0712
chordal neural plate9.64e-0712
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