FFCP PHASE1:Mm9::chr18:67247886..67247902,+: Difference between revisions
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|id=chr18:67247886..67247902,+
|short_description=p6@Gnal
|description=CAGE_peak_6_at_Gnal_5end
|association_with_transcript=-87bp_to_ENSMUST00000025402,NM_177137,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14680 | |EntrezGene=14680 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=459 | |||
|TSSclassifier=NA | |||
|UniProt=Q66L47,Q8BHK8 | |UniProt=Q66L47,Q8BHK8 | ||
|association_with_transcript=-87bp_to_ENSMUST00000025402,NM_177137,uc008flr.1,uc008fls.1_5end | |||
|cluster_id=chr18:67247886..67247902,+ | |||
|description=CAGE_peak_6_at_Gnal_5end | |||
|id=chr18:67247886..67247902,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.27e-25!23;CL:0000337!3.27e-25!23;CL:0000540!2.53e-16!33;CL:0000047!2.53e-16!33;CL:0000031!2.53e-16!33;CL:0000404!2.53e-16!33;CL:0000393!1.49e-12!39;CL:0000211!1.49e-12!39;CL:0002319!1.67e-11!43;CL:0000221!4.63e-11!44;CL:0000133!4.63e-11!44;CL:0000055!8.40e-09!50;CL:0002609!1.12e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-37,23;CL:0000337,1.39e-37,23;CL:0000540,7.29e-25,33;CL:0000047,7.29e-25,33;CL:0000031,7.29e-25,33;CL:0000404,7.29e-25,33;CL:0000393,2.30e-20,39;CL:0000211,2.30e-20,39;CL:0002319,4.61e-18,43;CL:0000221,1.49e-17,44;CL:0000133,1.49e-17,44;CL:0002609,5.66e-17,6;CL:0002321,1.95e-09,70;CL:0002608,4.51e-09,3;CL:0002612,5.10e-09,3;CL:0002610,2.03e-08,3;CL:0002613,1.66e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.32e-25!34;UBERON:0001049!1.05e-23!52;UBERON:0005068!1.05e-23!52;UBERON:0006241!1.05e-23!52;UBERON:0007135!1.05e-23!52;UBERON:0001017!7.06e-23!73;UBERON:0005743!7.06e-23!73;UBERON:0000073!7.42e-23!75;UBERON:0001016!7.42e-23!75;UBERON:0000955!1.77e-21!50;UBERON:0006238!1.77e-21!50;UBERON:0002616!7.01e-21!49;UBERON:0002791!8.39e-20!29;UBERON:0003528!8.39e-20!29;UBERON:0001893!8.39e-20!29;UBERON:0002346!1.22e-18!71;UBERON:0003075!1.22e-18!71;UBERON:0007284!1.22e-18!71;UBERON:0003080!1.65e-17!40;UBERON:0000033!1.78e-17!63;UBERON:0002780!1.37e-16!39;UBERON:0001890!1.37e-16!39;UBERON:0006240!1.37e-16!39;UBERON:0004121!6.41e-16!102;UBERON:0000924!6.41e-16!102;UBERON:0006601!6.41e-16!102;UBERON:0003056!1.65e-15!49;UBERON:0000956!1.58e-12!21;UBERON:0001869!1.58e-12!21;UBERON:0000203!1.58e-12!21;UBERON:0007811!1.19e-09!86;UBERON:0002420!9.77e-09!8;UBERON:0007245!9.77e-09!8;UBERON:0010009!9.77e-09!8;UBERON:0010011!9.77e-09!8;UBERON:0000454!9.77e-09!8;UBERON:0002619!2.35e-08!17;UBERON:0000153!6.58e-08!94;UBERON:0002240!1.57e-07!6;UBERON:0005174!1.57e-07!6;UBERON:0001137!1.57e-07!6;UBERON:0003076!7.96e-07!12;UBERON:0003057!7.96e-07!12;UBERON:0001948!9.01e-07!5;UBERON:0002315!9.01e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.85e-33,34;UBERON:0000073,3.30e-33,54;UBERON:0001017,4.67e-27,73;UBERON:0001049,6.23e-27,52;UBERON:0005068,6.23e-27,52;UBERON:0006241,6.23e-27,52;UBERON:0007135,6.23e-27,52;UBERON:0001016,3.60e-26,75;UBERON:0003528,6.18e-26,29;UBERON:0002791,6.18e-26,29;UBERON:0001893,6.18e-26,29;UBERON:0003080,2.67e-22,40;UBERON:0002616,5.46e-21,46;UBERON:0002346,7.75e-21,64;UBERON:0003075,7.75e-21,64;UBERON:0007284,7.75e-21,64;UBERON:0002780,1.28e-20,39;UBERON:0001890,1.28e-20,39;UBERON:0006240,1.28e-20,39;UBERON:0000955,1.94e-20,47;UBERON:0006238,1.94e-20,47;UBERON:0004121,2.39e-19,95;UBERON:0000924,2.39e-19,95;UBERON:0006601,2.39e-19,95;UBERON:0010371,1.40e-17,73;UBERON:0003056,2.34e-17,49;UBERON:0000956,1.19e-16,21;UBERON:0001869,1.19e-16,21;UBERON:0000203,1.19e-16,21;UBERON:0010314,8.49e-13,92;UBERON:0000369,2.46e-12,5;UBERON:0002435,2.46e-12,5;UBERON:0000204,2.46e-12,5;UBERON:0010082,2.46e-12,5;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0001954,7.80e-10,7;UBERON:0003022,7.80e-10,7;UBERON:0002421,7.80e-10,7;UBERON:0000349,7.80e-10,7;UBERON:0002600,7.80e-10,7;UBERON:0000025,2.94e-09,114;UBERON:0002619,4.69e-09,17;UBERON:0002257,5.10e-09,3;UBERON:0001948,7.15e-09,5;UBERON:0002315,7.15e-09,5;UBERON:0004684,2.03e-08,3;UBERON:0002275,2.03e-08,3;UBERON:0004111,2.73e-08,122;UBERON:0002240,2.17e-07,6;UBERON:0005174,2.17e-07,6;UBERON:0001137,2.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,3.42175720617976,2.8351247049655,4.41682418837902,0.856952953211411,1.32521124570968,3.30725157880376,1.91690942036473,2.75765635983006,2.20231761998777,1.40456071893706,1.53606533256243,1.05509030184155,1.28082701043374,1.04182674111352,1.11673199600552,0.56276261003168,0.45839474333043,2.65165726926301,2.27794689278565,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.3481157546434,1.37250180845588,8.41884159156192,1.73824320192276,1.27857728665165,0.83115217823824,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.3748254587495,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0.399024873401031,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.832326981263301,0.459483751644906,0.952587382566147,1.0429589335037,0.578727661391115,0.412085900803307,0,0.685738504770831,0.354951612318675,1.1921809497366,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,1.99848462350357,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,3.42175720617976,2.8351247049655,4.41682418837902,0.856952953211411,1.32521124570968,3.30725157880376,1.91690942036473,2.75765635983006,2.20231761998777,1.40456071893706,1.53606533256243,1.05509030184155,1.28082701043374,1.04182674111352,1.11673199600552,0.56276261003168,0.45839474333043,2.65165726926301,2.27794689278565,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.3481157546434,1.37250180845588,8.41884159156192,1.73824320192276,1.27857728665165,0.83115217823824,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.3748254587495,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0.399024873401031,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.832326981263301,0.459483751644906,0.952587382566147,1.0429589335037,0.578727661391115,0.412085900803307,0,0.685738504770831,0.354951612318675,1.1921809497366,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,1.99848462350357,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p6@Gnal | |||
}} | }} |
Latest revision as of 16:01, 1 October 2015
Short description: | p6@Gnal |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gnal_5end |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | -87bp_to_ENSMUST00000025402, NM_177137, uc008flr.1, uc008fls.1_5end |
EntrezGene: | Gnal |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-37 | 23 |
neuron | 7.29e-25 | 33 |
neuronal stem cell | 7.29e-25 | 33 |
neuroblast | 7.29e-25 | 33 |
electrically signaling cell | 7.29e-25 | 33 |
electrically responsive cell | 2.30e-20 | 39 |
electrically active cell | 2.30e-20 | 39 |
neural cell | 4.61e-18 | 43 |
ectodermal cell | 1.49e-17 | 44 |
neurectodermal cell | 1.49e-17 | 44 |
neuron of cerebral cortex | 5.66e-17 | 6 |
embryonic cell | 1.95e-09 | 70 |
hippocampal neuron | 4.51e-09 | 3 |
neuron of the ventral spinal cord | 5.10e-09 | 3 |
raphe nuclei neuron | 2.03e-08 | 3 |
striatum neuron | 1.66e-07 | 3 |