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FFCP PHASE1:Mm9::chr3:136333550..136333566,+: Difference between revisions

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(Created page with "{{FFCP |id=chr3:136333550..136333566,+ |short_description=p7@Ppp3ca |description=CAGE_peak_7_at_Ppp3ca_5end |association_with_transcript=-167bp_to_ENSMUST00000056758,NM_00...")
 
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{{FFCP
{{FFCP
|id=chr3:136333550..136333566,+
|DHSsupport=NA
|short_description=p7@Ppp3ca
|DPIdataset=NA
|description=CAGE_peak_7_at_Ppp3ca_5end
|association_with_transcript=-167bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end
|EntrezGene=19055
|EntrezGene=19055
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P63328,B2RRX2
|UniProt=P63328,B2RRX2
|association_with_transcript=-167bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end
|cluster_id=chr3:136333550..136333566,+
|description=CAGE_peak_7_at_Ppp3ca_5end
|id=chr3:136333550..136333566,+
|ontology_enrichment_celltype=CL:0000117!1.21e-09!23;CL:0000337!1.21e-09!23;CL:0000540!5.23e-08!33;CL:0000047!5.23e-08!33;CL:0000031!5.23e-08!33;CL:0000404!5.23e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-15,23;CL:0000337,1.33e-15,23;CL:0000540,1.05e-11,33;CL:0000047,1.05e-11,33;CL:0000031,1.05e-11,33;CL:0000404,1.05e-11,33;CL:0000393,1.91e-09,39;CL:0000211,1.91e-09,39;CL:0000221,1.50e-07,44;CL:0000133,1.50e-07,44;CL:0002319,3.06e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.66e-16!34;UBERON:0001049!2.50e-16!52;UBERON:0005068!2.50e-16!52;UBERON:0006241!2.50e-16!52;UBERON:0007135!2.50e-16!52;UBERON:0000033!4.65e-16!63;UBERON:0000955!2.13e-15!50;UBERON:0006238!2.13e-15!50;UBERON:0001017!6.40e-15!73;UBERON:0005743!6.40e-15!73;UBERON:0002616!7.97e-15!49;UBERON:0000073!5.55e-14!75;UBERON:0001016!5.55e-14!75;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0002346!2.54e-13!71;UBERON:0003075!2.54e-13!71;UBERON:0007284!2.54e-13!71;UBERON:0003080!3.73e-13!40;UBERON:0003056!8.45e-13!49;UBERON:0002780!9.74e-13!39;UBERON:0001890!9.74e-13!39;UBERON:0006240!9.74e-13!39;UBERON:0004121!1.39e-12!102;UBERON:0000924!1.39e-12!102;UBERON:0006601!1.39e-12!102;UBERON:0000956!6.20e-10!21;UBERON:0001869!6.20e-10!21;UBERON:0000203!6.20e-10!21;UBERON:0002619!2.22e-08!17;UBERON:0002021!5.98e-08!10;UBERON:0000411!5.98e-08!10;UBERON:0001950!5.98e-08!10;UBERON:0007811!1.75e-07!86;UBERON:0000153!8.11e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-28,54;UBERON:0001049,4.38e-26,52;UBERON:0005068,4.38e-26,52;UBERON:0006241,4.38e-26,52;UBERON:0007135,4.38e-26,52;UBERON:0002020,8.69e-26,34;UBERON:0001017,5.32e-25,73;UBERON:0001016,7.53e-24,75;UBERON:0002346,1.16e-22,64;UBERON:0003075,1.16e-22,64;UBERON:0007284,1.16e-22,64;UBERON:0000955,8.14e-22,47;UBERON:0006238,8.14e-22,47;UBERON:0003528,3.16e-21,29;UBERON:0002791,3.16e-21,29;UBERON:0001893,3.16e-21,29;UBERON:0002616,6.62e-21,46;UBERON:0010371,7.69e-20,73;UBERON:0004121,2.87e-19,95;UBERON:0000924,2.87e-19,95;UBERON:0006601,2.87e-19,95;UBERON:0003080,3.48e-19,40;UBERON:0002780,1.62e-18,39;UBERON:0001890,1.62e-18,39;UBERON:0006240,1.62e-18,39;UBERON:0003056,1.34e-16,49;UBERON:0000956,3.92e-15,21;UBERON:0001869,3.92e-15,21;UBERON:0000203,3.92e-15,21;UBERON:0010314,1.62e-14,92;UBERON:0002619,1.28e-12,17;UBERON:0002021,6.69e-12,10;UBERON:0000411,6.69e-12,10;UBERON:0001950,6.69e-12,10;UBERON:0004111,3.32e-08,122;UBERON:0000025,9.72e-08,114;UBERON:0003076,1.99e-07,12;UBERON:0003057,1.99e-07,12;UBERON:0002420,2.96e-07,8;UBERON:0007245,2.96e-07,8;UBERON:0010009,2.96e-07,8;UBERON:0010011,2.96e-07,8;UBERON:0000454,2.96e-07,8
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|phase1_expression=1.60148847104794,0,0,1.51232105653415,0.500895729946347,0.16787927191189,0.934450562382103,0.129123323441576,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0,0.315462165358238,0.822686601634433,0.42438965179803,0.935476191661768,0.595745707205312,0.261199789138935,0.639969691173627,0,1.14846392823004,0.86152399231815,0.215471232685889,0,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,1.67412652294763,1.5626706890476,1.57057123192139,2.35292595212406,3.41522742479223,2.91306211818692,0.125896817975577,0.101376931219515,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,1.17447824240415,0.725362142011344,0.336093799142464,0.257259436035947,0.573066879877513,1.03134418455488,2.83243045203437,2.64495489636016,0,0,0,1.7997994345628,0,0.7104801149461,0.599200221036809,0,1.76272340924412,1.75507719831198,1.05162480675691,3.71346279724945,2.20868540951614,1.34739879136449,1.24599112323707,1.83843757322004,3.30347642998166,5.36286819957788,3.84016333140609,1.45074916503213,2.19570344645783,2.6045668527838,1.11673199600552,2.25105044012672,3.66715794664344,3.83017161115768,5.97961059356232,2.98239113320481,0.302904773332736,0.302286240427142,0.579728977403356,0,0,0.539703191637817,0,0.896053774194671,0.561777680527007,0.340860645156116,0.519572009205738,0.35333957451034,1.12674735821344,2.56652954828636,2.54805239706646,7.11066703153331,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,0.452167921657868,0.823120949949934,0.628332956648377,0.494389935468748,0.578397427679647,0,0.323533699894818,0.883366073841574,0.484875253135222,0,5.27005434620785,3.77004072264219,0.510914110417183,0.239630249011841,0,1.39777249780371,1.79748767285787,16.0125210986519,4.64921102817598,10.7771078519211,11.7629110371952,3.32460871295296,6.48965052271031,0.712875546952214,0.622034853050465,0,0.631325567659422,0.650602214813519,0.229902104433473,0.360124259610698,0.90422890701429,1.08858398642125,1.7935920839879,1.21812241927647,0.776110112217047,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,0.61734640922383,0.199034266818493,2.1066395619397,0.257347907114715,0.852490498186778,0.414251545071004,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,1.05088808130453,0.658239399653922,0.985004784474571,0.729619285912702,0.438599962275997,0.219550115291051,0.402619256281115,18.9260953707715,2.46971069710283,0.660837565967596,0,0.853153002140936,0.696710015581316,0.515469845288373,0,0.889512175379481,0.190225626112559,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.685491075658373,1.1270773567308,0.610953983535943,0.581857461502877,0.49095073923223,0.316182685621286,0.147610147979602,0.470996183524124,0.616985819609003,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0.896987067609561,0.964887042726734,0.554259570499814,0.37898282354097,0.651859905768103,0.509235257325564,0.469380496577004,0.502518772325447,0.952174563544055,1.95133647857799,0.788175720530955,1.10732344824387,0.637819074629948,1.63863314715738,0.518054945597687,1.15719246865209,4.52373851817817,0.54390568381871,0.491764273019036,0.827810238914197,2.0871576698413,1.87538698547525,0.163934945376675,1.26235463602186,0,0.390438744296638,1.50796378412959,0.716906393857656,0.891194696329576,0,0.809621403349789,0.584511715822624,1.18586333383957,4.17717711348349,0.283880170416537,0.35613120733451,1.30309567482861,0.494910368917606,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0,0,0,1.02131881726136,0.18006109403131,0.776152102696527,0.643011105094777,0.532020700926821,0.535106452806212,1.64549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0.882113592219848,0.65954501176592,0.322928853391811,0.482503399425247,0.477489376012546,0.656563598980245,0.874442509889552,2.03967832211561,0.341741761595705,0,0.370389054739423,0,0.546776910884101,0.915112692826091,0.849892149969277,0.559805809294632,0.414599921413271,1.90934123603023,0.949007980743406,0.609958401380546,0.324016022465404,0.209088296014469,0,0.674321731924103,0.247960367176008,0,0.777689839750757,0.621339313086926,0.56369293868419,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.58678619322877,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.513554785824136,0.389762468933385,0.179026695667481,0.596044064343795,0.120195449519969,0,0.201932899896295,0.228620419965,0,0.0974578807397524,0.288635524920988,0.116876902181569,1.36038230169127,0,0,0.167884616364078,0.772758376128762,0.187682475451182,0.549454872801795,0.643105137237198,1.00314420807073,10.1655331671072,6.90487854760765,14.3223878359849,7.38968684077857,9.59115527678899,9.82012066606611,8.77529250301348,9.90706647093285,8.60970577069989,9.83744592328458,1.24544817101012,0,0.512200817262403,1.21553358534147,0.419226325255965,1.10306105070008,1.33348036680969,1.03017528619447,0.64183841918363,1.01078884705519,0.25347929989024,0.754505365544305,0.936415074698824,1.60062881012173,0.804096565378586,1.90517476513229,1.15884325944855,0.578727661391115,0.412085900803307,1.76638704161277,0.685738504770831,1.24233064311536,0.715308569841963,0.581385666529314,1.50575008664529,0.592302255241736,0.914639864363863,1.57841826862706,1.08643291076689,2.24456908663095,0.593175090620871,0.591026894253381,0.818462086339379,0.619747364743864,1.15743966588685,1.24905288968973,1.40358965067245,0.644613162144895,1.53030665655075,0.661774257358546,1.15933917810211
|short_description=p7@Ppp3ca
}}
}}

Latest revision as of 16:18, 1 October 2015

Short description:p7@Ppp3ca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Ppp3ca_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -167bp_to_ENSMUST00000056758, NM_008913, uc008rmg.1, uc008rmh.1_5end
EntrezGene:Ppp3ca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Ppp3ca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E818.93
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.33e-1523
neuroblast (sensu Vertebrata)1.33e-1523
neuron1.05e-1133
neuronal stem cell1.05e-1133
neuroblast1.05e-1133
electrically signaling cell1.05e-1133
electrically responsive cell1.91e-0939
electrically active cell1.91e-0939
ectodermal cell1.50e-0744
neurectodermal cell1.50e-0744
neural cell3.06e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.62e-2854
neural tube4.38e-2652
neural rod4.38e-2652
future spinal cord4.38e-2652
neural keel4.38e-2652
gray matter8.69e-2634
central nervous system5.32e-2573
nervous system7.53e-2475
neurectoderm1.16e-2264
neural plate1.16e-2264
presumptive neural plate1.16e-2264
brain8.14e-2247
future brain8.14e-2247
brain grey matter3.16e-2129
regional part of telencephalon3.16e-2129
telencephalon3.16e-2129
regional part of brain6.62e-2146
ecto-epithelium7.69e-2073
ectoderm-derived structure2.87e-1995
ectoderm2.87e-1995
presumptive ectoderm2.87e-1995
anterior neural tube3.48e-1940
regional part of forebrain1.62e-1839
forebrain1.62e-1839
future forebrain1.62e-1839
pre-chordal neural plate1.34e-1649
cerebral cortex3.92e-1521
cerebral hemisphere3.92e-1521
pallium3.92e-1521
structure with developmental contribution from neural crest1.62e-1492
regional part of cerebral cortex1.28e-1217
occipital lobe6.69e-1210
visual cortex6.69e-1210
neocortex6.69e-1210
anatomical conduit3.32e-08122
tube9.72e-08114
posterior neural tube1.99e-0712
chordal neural plate1.99e-0712
basal ganglion2.96e-078
nuclear complex of neuraxis2.96e-078
aggregate regional part of brain2.96e-078
collection of basal ganglia2.96e-078
cerebral subcortex2.96e-078
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