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FFCP PHASE1:Mm9::chr8:12915879..12915966,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:12915879..12915966,+
|DHSsupport=NA
|short_description=p1@Mcf2l
|DPIdataset=NA
|description=CAGE_peak_1_at_Mcf2l_5end
|association_with_transcript=0bp_to_ENSMUST00000064464,ENSMUST00000110876,ENSMUST00000156405,NM_178076,uc009kwl.2_5end
|EntrezGene=17207
|EntrezGene=17207
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9Q3S7,E9PXE2,Q6PDM6,Q8C474
|UniProt=E9Q3S7,E9PXE2,Q6PDM6,Q8C474
|association_with_transcript=0bp_to_ENSMUST00000064464,ENSMUST00000110876,ENSMUST00000156405,NM_178076,uc009kwl.2_5end
|cluster_id=chr8:12915879..12915966,+
|description=CAGE_peak_1_at_Mcf2l_5end
|id=chr8:12915879..12915966,+
|ontology_enrichment_celltype=CL:0000540!9.82e-16!33;CL:0000047!9.82e-16!33;CL:0000031!9.82e-16!33;CL:0000404!9.82e-16!33;CL:0000117!2.03e-15!23;CL:0000337!2.03e-15!23;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!3.14e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000540,6.73e-18,33;CL:0000047,6.73e-18,33;CL:0000031,6.73e-18,33;CL:0000404,6.73e-18,33;CL:0000117,1.55e-17,23;CL:0000337,1.55e-17,23;CL:0000393,6.95e-13,39;CL:0000211,6.95e-13,39;CL:0000221,3.48e-11,44;CL:0000133,3.48e-11,44;CL:0002319,6.12e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.30e-27!73;UBERON:0005743!5.30e-27!73;UBERON:0002346!2.93e-26!71;UBERON:0003075!2.93e-26!71;UBERON:0007284!2.93e-26!71;UBERON:0000073!8.63e-26!75;UBERON:0001016!8.63e-26!75;UBERON:0001049!3.15e-24!52;UBERON:0005068!3.15e-24!52;UBERON:0006241!3.15e-24!52;UBERON:0007135!3.15e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000033!1.10e-22!63;UBERON:0000955!3.52e-22!50;UBERON:0006238!3.52e-22!50;UBERON:0002616!1.21e-21!49;UBERON:0003056!1.50e-21!49;UBERON:0003080!7.01e-20!40;UBERON:0002780!2.66e-19!39;UBERON:0001890!2.66e-19!39;UBERON:0006240!2.66e-19!39;UBERON:0002020!5.91e-19!34;UBERON:0002791!2.32e-15!29;UBERON:0003528!2.32e-15!29;UBERON:0001893!2.32e-15!29;UBERON:0007811!3.16e-11!86;UBERON:0000153!1.33e-10!94;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0002619!3.63e-08!17;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10;UBERON:0000468!2.54e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.21e-32,73;UBERON:0001016,2.97e-30,75;UBERON:0002346,8.05e-30,64;UBERON:0003075,8.05e-30,64;UBERON:0007284,8.05e-30,64;UBERON:0000073,2.01e-29,54;UBERON:0001049,4.68e-28,52;UBERON:0005068,4.68e-28,52;UBERON:0006241,4.68e-28,52;UBERON:0007135,4.68e-28,52;UBERON:0004121,7.76e-26,95;UBERON:0000924,7.76e-26,95;UBERON:0006601,7.76e-26,95;UBERON:0010371,9.23e-25,73;UBERON:0003056,1.78e-24,49;UBERON:0000955,7.75e-24,47;UBERON:0006238,7.75e-24,47;UBERON:0002616,3.15e-23,46;UBERON:0003080,3.43e-23,40;UBERON:0002780,1.61e-22,39;UBERON:0001890,1.61e-22,39;UBERON:0006240,1.61e-22,39;UBERON:0002020,3.80e-22,34;UBERON:0003528,5.59e-18,29;UBERON:0002791,5.59e-18,29;UBERON:0001893,5.59e-18,29;UBERON:0010314,9.77e-18,92;UBERON:0000956,3.30e-12,21;UBERON:0001869,3.30e-12,21;UBERON:0000203,3.30e-12,21;UBERON:0002619,1.23e-09,17;UBERON:0002021,2.11e-08,10;UBERON:0000411,2.11e-08,10;UBERON:0001950,2.11e-08,10;UBERON:0002420,4.55e-07,8;UBERON:0007245,4.55e-07,8;UBERON:0010009,4.55e-07,8;UBERON:0010011,4.55e-07,8;UBERON:0000454,4.55e-07,8
|phase1_expression=5.76535849577258,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,49.1628999888823,56.6020347821075,32.3254015788151,0,0,0,0,0,0,1.15265491596466,22.8117147078651,30.2413301862987,26.5009451302741,48.2750163642428,57.6466891883711,30.5002090045236,34.6002150375833,31.2534387447407,14.3150645299205,16.5993539510744,12.595735727012,57.8980803135551,66.2370539681446,51.0495103145625,18.4260779340911,15.757353080887,19.7109739632085,51.5600024578918,48.1216281100968,48.4638559145781,0,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,5.35204995151386,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,4.16364784238726,3.34912026143355,3.22861696158482,3.46662073271032,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,6.73395833126558,12.1479089951804,0,0,0,0,20.6711082378655,25.6200337578431,69.9894741268655,24.8568777874955,35.0330176542553,14.7529511637288,24.6606719862992,0.712875546952214,0.124406970610093,0,0.631325567659422,1.95180664444056,2.75882525320168,4.68161537493908,8.89158425230719,7.34794190834341,8.71173297936978,10.4008914261299,8.01980449290949,0.215567992932842,2.64748512234947,1.75951124163949,2.19195732427575,2.78047249225598,0.348252166522167,0,2.18937693500343,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,19.767255165028,59.2730567304678,0,0.264450566663544,2.13288250535234,3.48355007790658,2.96395161040815,2.01683524623343,2.00140239460383,1.71203063501303,0.474529061544512,2.14108641141214,1.25667604400135,0.994782360205754,1.36474860983384,0,0.216138049874694,0,2.27601481143698,2.17072173958485,1.1270773567308,1.01825663922657,1.35766741017338,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,1.32643988239339,1.95557971730431,1.52770577197669,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,12.5229460190478,18.5194464815681,0,0,2.52406575533005,1.56175497718655,2.36965737506079,1.91175038362042,3.7875774594007,2.83076530788832,2.42886421004937,7.3063964477828,5.53402889125133,14.4594592389813,0.283880170416537,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,3.15614827001476,1.81394134178851,0.565815239267694,1.77181135728464,2.45948118355142,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,1.05418608574999,0,3.40439605753788,4.32146625675145,7.63216234318252,9.21649250635847,11.8817956540323,12.1290795969408,13.8221177305782,18.8768268451052,0.704015124191131,0,0.220528398054962,0,0.968786560175433,0.542816324353403,0.238744688006273,0,0.291480836629851,10.0129663085675,0,1.65109494370578,0,0,0,0,0,0,0,0,2.21435195506795,3.86306987541013,2.26811215725783,3.13632444021703,1.9652630737156,1.34864346384821,1.48776220305605,0.523511883968059,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,2.02747350588934,1.40828686374905,0.651021924219751,0.838874755405687,0,0,0,1.82452693761148,3.3894615864393,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,45.7448992519824,44.6515479411962,37.8111038870002,39.1825255743608,33.5690434687615,25.6833925112498,34.4261475118221,27.0192721934532,28.5479717660049,20.192652158321,1.24544817101012,9.17757208822371,8.19521307619844,6.80698807791223,5.03071590307158,5.88299227040045,7.11189528965169,11.1258930909003,9.94849549734627,8.33900798820532,10.6461305953901,7.73367999682912,8.5213771797593,8.19521950782327,10.9127391015665,8.09699275181225,9.50251472747815,8.10218725947561,6.1812885120496,6.91834924631667,8.9146005620208,8.34136288948886,8.34526664815623,10.4649419975277,9.50504742194839,7.36147088657586,7.50004688778368,9.73357932320019,6.24698923690964,6.73370725989286,9.6094364680581,10.145961684683,6.95692773388472,9.14127362997199,9.64533054905707,23.4821943261669,9.12333272937093,9.45432637812513,5.92993829413414,1.76473135295612,0.927471342481686
|phase1_expression=5.76535849577258,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,49.1628999888823,56.6020347821075,32.3254015788151,0,0,0,0,0,0,1.15265491596466,22.8117147078651,30.2413301862987,26.5009451302741,48.2750163642428,57.6466891883711,30.5002090045236,34.6002150375833,31.2534387447407,14.3150645299205,16.5993539510744,12.595735727012,57.8980803135551,66.2370539681446,51.0495103145625,18.4260779340911,15.757353080887,19.7109739632085,51.5600024578918,48.1216281100968,48.4638559145781,0,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,5.35204995151386,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,4.16364784238726,3.34912026143355,3.22861696158482,3.46662073271032,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,6.73395833126558,12.1479089951804,0,0,0,0,20.6711082378655,25.6200337578431,69.9894741268655,24.8568777874955,35.0330176542553,14.7529511637288,24.6606719862992,0.712875546952214,0.124406970610093,0,0.631325567659422,1.95180664444056,2.75882525320168,4.68161537493908,8.89158425230719,7.34794190834341,8.71173297936978,10.4008914261299,8.01980449290949,0.215567992932842,2.64748512234947,1.75951124163949,2.19195732427575,2.78047249225598,0.348252166522167,0,2.18937693500343,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,19.767255165028,59.2730567304678,0,0.264450566663544,2.13288250535234,3.48355007790658,2.96395161040815,2.01683524623343,2.00140239460383,1.71203063501303,0.474529061544512,2.14108641141214,1.25667604400135,0.994782360205754,1.36474860983384,0,0.216138049874694,0,2.27601481143698,2.17072173958485,1.1270773567308,1.01825663922657,1.35766741017338,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,1.32643988239339,1.95557971730431,1.52770577197669,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,12.5229460190478,18.5194464815681,0,0,2.52406575533005,1.56175497718655,2.36965737506079,1.91175038362042,3.7875774594007,2.83076530788832,2.42886421004937,7.3063964477828,5.53402889125133,14.4594592389813,0.283880170416537,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,3.15614827001476,1.81394134178851,0.565815239267694,1.77181135728464,2.45948118355142,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,1.05418608574999,0,3.40439605753788,4.32146625675145,7.63216234318252,9.21649250635847,11.8817956540323,12.1290795969408,13.8221177305782,18.8768268451052,0.704015124191131,0,0.220528398054962,0,0.968786560175433,0.542816324353403,0.238744688006273,0,0.291480836629851,10.0129663085675,0,1.65109494370578,0,0,0,0,0,0,0,0,2.21435195506795,3.86306987541013,2.26811215725783,3.13632444021703,1.9652630737156,1.34864346384821,1.48776220305605,0.523511883968059,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,2.02747350588934,1.40828686374905,0.651021924219751,0.838874755405687,0,0,0,1.82452693761148,3.3894615864393,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,45.7448992519824,44.6515479411962,37.8111038870002,39.1825255743608,33.5690434687615,25.6833925112498,34.4261475118221,27.0192721934532,28.5479717660049,20.192652158321,1.24544817101012,9.17757208822371,8.19521307619844,6.80698807791223,5.03071590307158,5.88299227040045,7.11189528965169,11.1258930909003,9.94849549734627,8.33900798820532,10.6461305953901,7.73367999682912,8.5213771797593,8.19521950782327,10.9127391015665,8.09699275181225,9.50251472747815,8.10218725947561,6.1812885120496,6.91834924631667,8.9146005620208,8.34136288948886,8.34526664815623,10.4649419975277,9.50504742194839,7.36147088657586,7.50004688778368,9.73357932320019,6.24698923690964,6.73370725989286,9.6094364680581,10.145961684683,6.95692773388472,9.14127362997199,9.64533054905707,23.4821943261669,9.12333272937093,9.45432637812513,5.92993829413414,1.76473135295612,0.927471342481686
|short_description=p1@Mcf2l
}}
}}

Latest revision as of 18:06, 1 October 2015

Short description:p1@Mcf2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mcf2l_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000064464, ENSMUST00000110876, ENSMUST00000156405, NM_178076, uc009kwl.2_5end
EntrezGene:Mcf2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mcf2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C349.16
Mouse Granule cells, donor2.CNhs12357.11731-123E356.60
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.50
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F148.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D557.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D631.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D457.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F466.24
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D851.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D651.56
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F648.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E148.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.67
corpus striatum, adult.CNhs10487.19-21D825.62
corpus striatum, neonate N00.CNhs11226.630-43F169.99
cortex, adult.CNhs10473.12-14D524.86
cortex, neonate N30.CNhs11107.1392-42F235.03
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B224.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C67.35
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G810.40
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G159.27
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.52
medulla oblongata, neonate N30.CNhs11200.1396-42A318.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C77.63
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.50
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F99.65
whole body, embryo E17.CNhs10517.475-3I523.48
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.73e-1833
neuronal stem cell6.73e-1833
neuroblast6.73e-1833
electrically signaling cell6.73e-1833
CNS neuron (sensu Vertebrata)1.55e-1723
neuroblast (sensu Vertebrata)1.55e-1723
electrically responsive cell6.95e-1339
electrically active cell6.95e-1339
ectodermal cell3.48e-1144
neurectodermal cell3.48e-1144
neural cell6.12e-1143

Uber anatomy
Ontology termp-valuen
central nervous system6.21e-3273
nervous system2.97e-3075
neurectoderm8.05e-3064
neural plate8.05e-3064
presumptive neural plate8.05e-3064
regional part of nervous system2.01e-2954
neural tube4.68e-2852
neural rod4.68e-2852
future spinal cord4.68e-2852
neural keel4.68e-2852
ectoderm-derived structure7.76e-2695
ectoderm7.76e-2695
presumptive ectoderm7.76e-2695
ecto-epithelium9.23e-2573
pre-chordal neural plate1.78e-2449
brain7.75e-2447
future brain7.75e-2447
regional part of brain3.15e-2346
anterior neural tube3.43e-2340
regional part of forebrain1.61e-2239
forebrain1.61e-2239
future forebrain1.61e-2239
gray matter3.80e-2234
brain grey matter5.59e-1829
regional part of telencephalon5.59e-1829
telencephalon5.59e-1829
structure with developmental contribution from neural crest9.77e-1892
cerebral cortex3.30e-1221
cerebral hemisphere3.30e-1221
pallium3.30e-1221
regional part of cerebral cortex1.23e-0917
occipital lobe2.11e-0810
visual cortex2.11e-0810
neocortex2.11e-0810
basal ganglion4.55e-078
nuclear complex of neuraxis4.55e-078
aggregate regional part of brain4.55e-078
collection of basal ganglia4.55e-078
cerebral subcortex4.55e-078
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