Personal tools

FFCP PHASE1:Mm9::chr3:146433540..146433566,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:146433540..146433566,- |short_description=p8@Prkacb |description=CAGE_peak_8_at_Prkacb_5end |association_with_transcript=90bp_to_NM_001164199,uc008rrt.2_5e...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:146433540..146433566,-
|DHSsupport=NA
|short_description=p8@Prkacb
|DPIdataset=NA
|description=CAGE_peak_8_at_Prkacb_5end
|association_with_transcript=90bp_to_NM_001164199,uc008rrt.2_5end
|EntrezGene=18749
|EntrezGene=18749
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P68181
|UniProt=P68181
|association_with_transcript=90bp_to_NM_001164199,uc008rrt.2_5end
|cluster_id=chr3:146433540..146433566,-
|description=CAGE_peak_8_at_Prkacb_5end
|id=chr3:146433540..146433566,-
|ontology_enrichment_celltype=CL:0000117!4.82e-14!23;CL:0000337!4.82e-14!23;CL:0000540!8.83e-09!33;CL:0000047!8.83e-09!33;CL:0000031!8.83e-09!33;CL:0000404!8.83e-09!33;CL:0000393!1.56e-07!39;CL:0000211!1.56e-07!39;CL:0002319!2.88e-07!43;CL:0000221!7.41e-07!44;CL:0000133!7.41e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.90e-20,23;CL:0000337,9.90e-20,23;CL:0000540,1.15e-11,33;CL:0000047,1.15e-11,33;CL:0000031,1.15e-11,33;CL:0000404,1.15e-11,33;CL:0002319,3.29e-09,43;CL:0000393,6.84e-09,39;CL:0000211,6.84e-09,39;CL:0000221,7.55e-09,44;CL:0000133,7.55e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.51e-26!71;UBERON:0003075!5.51e-26!71;UBERON:0007284!5.51e-26!71;UBERON:0001049!1.44e-24!52;UBERON:0005068!1.44e-24!52;UBERON:0006241!1.44e-24!52;UBERON:0007135!1.44e-24!52;UBERON:0000033!2.41e-24!63;UBERON:0000955!2.16e-23!50;UBERON:0006238!2.16e-23!50;UBERON:0000073!3.20e-23!75;UBERON:0001016!3.20e-23!75;UBERON:0001017!6.26e-23!73;UBERON:0005743!6.26e-23!73;UBERON:0002616!1.11e-22!49;UBERON:0004121!1.33e-22!102;UBERON:0000924!1.33e-22!102;UBERON:0006601!1.33e-22!102;UBERON:0002020!1.37e-20!34;UBERON:0003056!2.41e-20!49;UBERON:0003080!4.24e-19!40;UBERON:0002780!2.89e-18!39;UBERON:0001890!2.89e-18!39;UBERON:0006240!2.89e-18!39;UBERON:0002791!1.98e-17!29;UBERON:0003528!1.98e-17!29;UBERON:0001893!1.98e-17!29;UBERON:0000956!5.95e-12!21;UBERON:0001869!5.95e-12!21;UBERON:0000203!5.95e-12!21;UBERON:0007811!8.30e-12!86;UBERON:0002619!5.27e-10!17;UBERON:0000153!5.13e-09!94;UBERON:0002021!2.65e-08!10;UBERON:0000411!2.65e-08!10;UBERON:0001950!2.65e-08!10;UBERON:0000025!9.45e-08!114;UBERON:0004111!2.45e-07!122;UBERON:0002420!9.09e-07!8;UBERON:0007245!9.09e-07!8;UBERON:0010009!9.09e-07!8;UBERON:0010011!9.09e-07!8;UBERON:0000454!9.09e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-36,54;UBERON:0001049,2.33e-34,52;UBERON:0005068,2.33e-34,52;UBERON:0006241,2.33e-34,52;UBERON:0007135,2.33e-34,52;UBERON:0001017,3.87e-32,73;UBERON:0001016,7.57e-31,75;UBERON:0002346,9.49e-31,64;UBERON:0003075,9.49e-31,64;UBERON:0007284,9.49e-31,64;UBERON:0002020,1.40e-30,34;UBERON:0000955,5.24e-29,47;UBERON:0006238,5.24e-29,47;UBERON:0002616,6.17e-28,46;UBERON:0003528,1.42e-25,29;UBERON:0002791,1.42e-25,29;UBERON:0001893,1.42e-25,29;UBERON:0004121,2.91e-25,95;UBERON:0000924,2.91e-25,95;UBERON:0006601,2.91e-25,95;UBERON:0010371,4.18e-25,73;UBERON:0003080,6.38e-25,40;UBERON:0002780,1.17e-23,39;UBERON:0001890,1.17e-23,39;UBERON:0006240,1.17e-23,39;UBERON:0003056,1.26e-23,49;UBERON:0010314,5.69e-19,92;UBERON:0000956,6.17e-17,21;UBERON:0001869,6.17e-17,21;UBERON:0000203,6.17e-17,21;UBERON:0002619,7.47e-14,17;UBERON:0002021,2.94e-12,10;UBERON:0000411,2.94e-12,10;UBERON:0001950,2.94e-12,10;UBERON:0002420,7.86e-10,8;UBERON:0007245,7.86e-10,8;UBERON:0010009,7.86e-10,8;UBERON:0010011,7.86e-10,8;UBERON:0000454,7.86e-10,8;UBERON:0003076,1.33e-09,12;UBERON:0003057,1.33e-09,12;UBERON:0000025,3.81e-09,114;UBERON:0004111,9.28e-08,122;UBERON:0002240,2.20e-07,6;UBERON:0005174,2.20e-07,6;UBERON:0001137,2.20e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5378032791413,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,3.23706337375356,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.75507719831198,1.26194976810829,5.99867067247988,6.18431914664518,1.46988959057945,0.958454710182364,1.83843757322004,16.5173821499083,19.025413374693,19.0472101237742,4.48413378282659,4.20843160571084,3.12548022334056,18.1468949350898,24.7615548413939,20.1693687065389,3.83017161115768,8.68467252874528,7.08317894136142,0.37863096666592,0.529000920747499,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,1.63286352971307,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.940709657085638,0.753999547978053,0,0,0,0,0,0,0,13.1751358655196,25.1336048176146,0,0,0,0,31.7556155538224,33.3975440057597,10.8062742817063,20.8589184230732,24.2929684463814,21.8177446787538,24.6606719862992,0,0,0,1.05220927943237,0,0.459804208866946,0.720248519221397,0.30140963567143,0.612328492361951,1.0249097622788,1.49922759295566,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0,0.804820204198858,3.15266424391358,0.493679549740441,0,0.324275238183423,0,0,0.134206418760372,19.1363853193356,9.67303356365274,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0.605050573870028,0.444756087689741,0,0.949058123089023,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,24.72479085812,24.1456074379939,0,0,0.315508219416257,0,0,0,0,0,0,0,0.790575555893047,13.4954952897159,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0.906970670894253,0.943025398779491,0.885905678642318,2.45948118355142,1.55056975900933,2.18120237686503,3.20847640546249,0.632073515871632,1.05418608574999,0,5.10659408630682,0,0.129358683782755,0,0.354680467284547,0.713475270408282,1.64549020602121,0.913394847343798,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,34.1182555699338,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.743881101528023,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,16.3778034358949,21.1749608793301,20.6242384838183,14.7793736815571,13.7016503954128,18.1294535373528,14.8504950050997,16.6618845192962,17.672553950384,12.4262474820437,0.103787347584177,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0.367687016900028,0.888986911206461,1.03017528619447,0.64183841918363,1.76888048234658,1.2673964994512,0.188626341386076,0.842773567228942,1.40855335290712,1.37845125493472,1.90517476513229,1.50649623728312,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,1.06485483695602,1.43061713968393,1.30811774969096,1.12931256498397,0.507687647350059,1.46342378298218,2.10455769150274,0.814824683075171,1.12228454331548,0.237270036248348,1.0835493061312,0.409231043169689,0.309873682371932,1.35034627686799,2.74791635731741,1.63752125911786,0.859484216193193,0.191288332068843,0.661774257358546,0
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5378032791413,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,3.23706337375356,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.75507719831198,1.26194976810829,5.99867067247988,6.18431914664518,1.46988959057945,0.958454710182364,1.83843757322004,16.5173821499083,19.025413374693,19.0472101237742,4.48413378282659,4.20843160571084,3.12548022334056,18.1468949350898,24.7615548413939,20.1693687065389,3.83017161115768,8.68467252874528,7.08317894136142,0.37863096666592,0.529000920747499,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,1.63286352971307,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.940709657085638,0.753999547978053,0,0,0,0,0,0,0,13.1751358655196,25.1336048176146,0,0,0,0,31.7556155538224,33.3975440057597,10.8062742817063,20.8589184230732,24.2929684463814,21.8177446787538,24.6606719862992,0,0,0,1.05220927943237,0,0.459804208866946,0.720248519221397,0.30140963567143,0.612328492361951,1.0249097622788,1.49922759295566,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0,0.804820204198858,3.15266424391358,0.493679549740441,0,0.324275238183423,0,0,0.134206418760372,19.1363853193356,9.67303356365274,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0.605050573870028,0.444756087689741,0,0.949058123089023,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,24.72479085812,24.1456074379939,0,0,0.315508219416257,0,0,0,0,0,0,0,0.790575555893047,13.4954952897159,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0.906970670894253,0.943025398779491,0.885905678642318,2.45948118355142,1.55056975900933,2.18120237686503,3.20847640546249,0.632073515871632,1.05418608574999,0,5.10659408630682,0,0.129358683782755,0,0.354680467284547,0.713475270408282,1.64549020602121,0.913394847343798,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,34.1182555699338,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.743881101528023,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,16.3778034358949,21.1749608793301,20.6242384838183,14.7793736815571,13.7016503954128,18.1294535373528,14.8504950050997,16.6618845192962,17.672553950384,12.4262474820437,0.103787347584177,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0.367687016900028,0.888986911206461,1.03017528619447,0.64183841918363,1.76888048234658,1.2673964994512,0.188626341386076,0.842773567228942,1.40855335290712,1.37845125493472,1.90517476513229,1.50649623728312,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,1.06485483695602,1.43061713968393,1.30811774969096,1.12931256498397,0.507687647350059,1.46342378298218,2.10455769150274,0.814824683075171,1.12228454331548,0.237270036248348,1.0835493061312,0.409231043169689,0.309873682371932,1.35034627686799,2.74791635731741,1.63752125911786,0.859484216193193,0.191288332068843,0.661774257358546,0
|short_description=p8@Prkacb
}}
}}

Latest revision as of 18:56, 1 October 2015

Short description:p8@Prkacb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Prkacb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 90bp_to_NM_001164199, uc008rrt.2_5end
EntrezGene:Prkacb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Prkacb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I225.13
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.76
corpus striatum, adult.CNhs10487.19-21D833.40
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D520.86
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B224.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E819.14
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C224.72
medulla oblongata, neonate N30.CNhs11200.1396-42A324.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C934.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.90e-2023
neuroblast (sensu Vertebrata)9.90e-2023
neuron1.15e-1133
neuronal stem cell1.15e-1133
neuroblast1.15e-1133
electrically signaling cell1.15e-1133
neural cell3.29e-0943
electrically responsive cell6.84e-0939
electrically active cell6.84e-0939
ectodermal cell7.55e-0944
neurectodermal cell7.55e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.29e-3654
neural tube2.33e-3452
neural rod2.33e-3452
future spinal cord2.33e-3452
neural keel2.33e-3452
central nervous system3.87e-3273
nervous system7.57e-3175
neurectoderm9.49e-3164
neural plate9.49e-3164
presumptive neural plate9.49e-3164
gray matter1.40e-3034
brain5.24e-2947
future brain5.24e-2947
regional part of brain6.17e-2846
brain grey matter1.42e-2529
regional part of telencephalon1.42e-2529
telencephalon1.42e-2529
ectoderm-derived structure2.91e-2595
ectoderm2.91e-2595
presumptive ectoderm2.91e-2595
ecto-epithelium4.18e-2573
anterior neural tube6.38e-2540
regional part of forebrain1.17e-2339
forebrain1.17e-2339
future forebrain1.17e-2339
pre-chordal neural plate1.26e-2349
structure with developmental contribution from neural crest5.69e-1992
cerebral cortex6.17e-1721
cerebral hemisphere6.17e-1721
pallium6.17e-1721
regional part of cerebral cortex7.47e-1417
occipital lobe2.94e-1210
visual cortex2.94e-1210
neocortex2.94e-1210
basal ganglion7.86e-108
nuclear complex of neuraxis7.86e-108
aggregate regional part of brain7.86e-108
collection of basal ganglia7.86e-108
cerebral subcortex7.86e-108
posterior neural tube1.33e-0912
chordal neural plate1.33e-0912
tube3.81e-09114
anatomical conduit9.28e-08122
spinal cord2.20e-076
dorsal region element2.20e-076
dorsum2.20e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:146433540..146433566,-&oldid=4317345"