FFCP PHASE1:Mm9::chr18:82753804..82753847,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17196|HGNC=|MCL_coexpression_id=675|UniProt=|association_with_transcript=1bp_to_uc012bfn.1_5end|description=CAGE_peak_7_at_Mbp_5end|id=chr18:82753804..82753847,+|ontology_enrichment_celltype=CL:0002614!9.88e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-10,23;CL:0000337,1.67e-10,23;CL:0002614,1.17e-09,3;CL:0002610,2.69e-09,3;CL:0002319,3.92e-08,43;CL:0000221,6.90e-08,44;CL:0000133,6.90e-08,44;CL:0002611,6.72e-07,2;CL:0000540,9.89e-07,33;CL:0000047,9.89e-07,33;CL:0000031,9.89e-07,33;CL:0000404,9.89e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.58e-22!75;UBERON:0001016!1.58e-22!75;UBERON:0001049!1.79e-20!52;UBERON:0005068!1.79e-20!52;UBERON:0006241!1.79e-20!52;UBERON:0007135!1.79e-20!52;UBERON:0001017!1.87e-20!73;UBERON:0005743!1.87e-20!73;UBERON:0000955!1.06e-19!50;UBERON:0006238!1.06e-19!50;UBERON:0004121!2.46e-19!102;UBERON:0000924!2.46e-19!102;UBERON:0006601!2.46e-19!102;UBERON:0000033!2.94e-19!63;UBERON:0002616!1.16e-18!49;UBERON:0002346!2.72e-16!71;UBERON:0003075!2.72e-16!71;UBERON:0007284!2.72e-16!71;UBERON:0002020!5.41e-16!34;UBERON:0002021!2.33e-15!10;UBERON:0000411!2.33e-15!10;UBERON:0001950!2.33e-15!10;UBERON:0007811!9.07e-13!86;UBERON:0002791!8.85e-12!29;UBERON:0003528!8.85e-12!29;UBERON:0001893!8.85e-12!29;UBERON:0002298!1.26e-11!6;UBERON:0003056!1.67e-11!49;UBERON:0003076!2.34e-11!12;UBERON:0003057!2.34e-11!12;UBERON:0003080!2.68e-11!40;UBERON:0000153!5.90e-11!94;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0002619!5.86e-10!17;UBERON:0000956!4.33e-09!21;UBERON:0001869!4.33e-09!21;UBERON:0000203!4.33e-09!21;UBERON:0002950!3.41e-08!4;UBERON:0001891!3.41e-08!4;UBERON:0009616!3.41e-08!4;UBERON:0002240!1.17e-07!6;UBERON:0005174!1.17e-07!6;UBERON:0001137!1.17e-07!6;UBERON:0002038!9.88e-07!3;UBERON:0002308!9.88e-07!3;UBERON:0009663!9.88e-07!3;UBERON:0009661!9.88e-07!3;UBERON:0006331!9.88e-07!3;UBERON:0000125!9.88e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-34,54;UBERON:0001016,2.10e-31,75;UBERON:0001017,3.04e-30,73;UBERON:0001049,3.75e-30,52;UBERON:0005068,3.75e-30,52;UBERON:0006241,3.75e-30,52;UBERON:0007135,3.75e-30,52;UBERON:0002346,1.99e-25,64;UBERON:0003075,1.99e-25,64;UBERON:0007284,1.99e-25,64;UBERON:0004121,3.34e-25,95;UBERON:0000924,3.34e-25,95;UBERON:0006601,3.34e-25,95;UBERON:0010371,1.37e-21,73;UBERON:0002616,1.71e-21,46;UBERON:0002020,1.74e-21,34;UBERON:0000955,6.19e-21,47;UBERON:0006238,6.19e-21,47;UBERON:0003076,1.50e-17,12;UBERON:0003057,1.50e-17,12;UBERON:0010314,6.05e-16,92;UBERON:0003080,1.33e-15,40;UBERON:0002021,3.17e-15,10;UBERON:0000411,3.17e-15,10;UBERON:0001950,3.17e-15,10;UBERON:0003528,5.11e-15,29;UBERON:0002791,5.11e-15,29;UBERON:0001893,5.11e-15,29;UBERON:0002780,4.37e-14,39;UBERON:0001890,4.37e-14,39;UBERON:0006240,4.37e-14,39;UBERON:0003056,1.35e-13,49;UBERON:0002950,6.21e-12,4;UBERON:0001891,6.21e-12,4;UBERON:0009616,6.21e-12,4;UBERON:0010286,6.21e-12,4;UBERON:0002240,2.40e-11,6;UBERON:0005174,2.40e-11,6;UBERON:0001137,2.40e-11,6;UBERON:0002619,9.49e-11,17;UBERON:0000025,1.05e-10,114;UBERON:0000956,2.52e-10,21;UBERON:0001869,2.52e-10,21;UBERON:0000203,2.52e-10,21;UBERON:0002038,1.17e-09,3;UBERON:0009663,1.17e-09,3;UBERON:0009661,1.17e-09,3;UBERON:0000125,1.17e-09,3;UBERON:0002308,1.17e-09,3;UBERON:0004111,1.24e-09,122;UBERON:0004684,2.69e-09,3;UBERON:0002275,2.69e-09,3;UBERON:0001948,8.36e-09,5;UBERON:0002315,8.36e-09,5;UBERON:0011216,2.87e-08,194;UBERON:0004733,6.82e-08,6;UBERON:0004732,6.82e-08,6;UBERON:0002028,6.82e-08,6;UBERON:0007277,6.82e-08,6;UBERON:0001896,5.53e-07,2;UBERON:0002298,5.53e-07,2;UBERON:0005290,5.53e-07,2;UBERON:0010096,5.53e-07,2;UBERON:0002256,6.72e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,3.07374644257244,0,0,0,13.4255962669788,10.3808214247258,0,0,0,11.0115880999389,8.68273898979276,7.98753972932466,0,0,0,16.4717969410815,11.8180148106653,11.0014738399303,2.06240009831567,1.56608848879013,0,1.8931548333296,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.220841518460394,0,0,2.04946557908083,35.8153868651008,0,0,0,0,3.2953940669061,5.94750783664214,0,1.56441888173049,2.81287003063364,5.81806524766768,7.62533936418461,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5963389391943,16.8784828692773,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,3.22227665555024,4.58316410751517,2.92150409984269,4.11049511862385,0.755393897389701,3.37511250115903,0.900642406448441,1.81256963593682,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p7@Mbp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17196 | |||
|HGNC= | |||
|MCL_coexpression_id=675 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_uc012bfn.1_5end | |||
|cluster_id=chr18:82753804..82753847,+ | |||
|description=CAGE_peak_7_at_Mbp_5end | |||
|id=chr18:82753804..82753847,+ | |||
|ontology_enrichment_celltype=CL:0002614!9.88e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-10,23;CL:0000337,1.67e-10,23;CL:0002614,1.17e-09,3;CL:0002610,2.69e-09,3;CL:0002319,3.92e-08,43;CL:0000221,6.90e-08,44;CL:0000133,6.90e-08,44;CL:0002611,6.72e-07,2;CL:0000540,9.89e-07,33;CL:0000047,9.89e-07,33;CL:0000031,9.89e-07,33;CL:0000404,9.89e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.58e-22!75;UBERON:0001016!1.58e-22!75;UBERON:0001049!1.79e-20!52;UBERON:0005068!1.79e-20!52;UBERON:0006241!1.79e-20!52;UBERON:0007135!1.79e-20!52;UBERON:0001017!1.87e-20!73;UBERON:0005743!1.87e-20!73;UBERON:0000955!1.06e-19!50;UBERON:0006238!1.06e-19!50;UBERON:0004121!2.46e-19!102;UBERON:0000924!2.46e-19!102;UBERON:0006601!2.46e-19!102;UBERON:0000033!2.94e-19!63;UBERON:0002616!1.16e-18!49;UBERON:0002346!2.72e-16!71;UBERON:0003075!2.72e-16!71;UBERON:0007284!2.72e-16!71;UBERON:0002020!5.41e-16!34;UBERON:0002021!2.33e-15!10;UBERON:0000411!2.33e-15!10;UBERON:0001950!2.33e-15!10;UBERON:0007811!9.07e-13!86;UBERON:0002791!8.85e-12!29;UBERON:0003528!8.85e-12!29;UBERON:0001893!8.85e-12!29;UBERON:0002298!1.26e-11!6;UBERON:0003056!1.67e-11!49;UBERON:0003076!2.34e-11!12;UBERON:0003057!2.34e-11!12;UBERON:0003080!2.68e-11!40;UBERON:0000153!5.90e-11!94;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0002619!5.86e-10!17;UBERON:0000956!4.33e-09!21;UBERON:0001869!4.33e-09!21;UBERON:0000203!4.33e-09!21;UBERON:0002950!3.41e-08!4;UBERON:0001891!3.41e-08!4;UBERON:0009616!3.41e-08!4;UBERON:0002240!1.17e-07!6;UBERON:0005174!1.17e-07!6;UBERON:0001137!1.17e-07!6;UBERON:0002038!9.88e-07!3;UBERON:0002308!9.88e-07!3;UBERON:0009663!9.88e-07!3;UBERON:0009661!9.88e-07!3;UBERON:0006331!9.88e-07!3;UBERON:0000125!9.88e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-34,54;UBERON:0001016,2.10e-31,75;UBERON:0001017,3.04e-30,73;UBERON:0001049,3.75e-30,52;UBERON:0005068,3.75e-30,52;UBERON:0006241,3.75e-30,52;UBERON:0007135,3.75e-30,52;UBERON:0002346,1.99e-25,64;UBERON:0003075,1.99e-25,64;UBERON:0007284,1.99e-25,64;UBERON:0004121,3.34e-25,95;UBERON:0000924,3.34e-25,95;UBERON:0006601,3.34e-25,95;UBERON:0010371,1.37e-21,73;UBERON:0002616,1.71e-21,46;UBERON:0002020,1.74e-21,34;UBERON:0000955,6.19e-21,47;UBERON:0006238,6.19e-21,47;UBERON:0003076,1.50e-17,12;UBERON:0003057,1.50e-17,12;UBERON:0010314,6.05e-16,92;UBERON:0003080,1.33e-15,40;UBERON:0002021,3.17e-15,10;UBERON:0000411,3.17e-15,10;UBERON:0001950,3.17e-15,10;UBERON:0003528,5.11e-15,29;UBERON:0002791,5.11e-15,29;UBERON:0001893,5.11e-15,29;UBERON:0002780,4.37e-14,39;UBERON:0001890,4.37e-14,39;UBERON:0006240,4.37e-14,39;UBERON:0003056,1.35e-13,49;UBERON:0002950,6.21e-12,4;UBERON:0001891,6.21e-12,4;UBERON:0009616,6.21e-12,4;UBERON:0010286,6.21e-12,4;UBERON:0002240,2.40e-11,6;UBERON:0005174,2.40e-11,6;UBERON:0001137,2.40e-11,6;UBERON:0002619,9.49e-11,17;UBERON:0000025,1.05e-10,114;UBERON:0000956,2.52e-10,21;UBERON:0001869,2.52e-10,21;UBERON:0000203,2.52e-10,21;UBERON:0002038,1.17e-09,3;UBERON:0009663,1.17e-09,3;UBERON:0009661,1.17e-09,3;UBERON:0000125,1.17e-09,3;UBERON:0002308,1.17e-09,3;UBERON:0004111,1.24e-09,122;UBERON:0004684,2.69e-09,3;UBERON:0002275,2.69e-09,3;UBERON:0001948,8.36e-09,5;UBERON:0002315,8.36e-09,5;UBERON:0011216,2.87e-08,194;UBERON:0004733,6.82e-08,6;UBERON:0004732,6.82e-08,6;UBERON:0002028,6.82e-08,6;UBERON:0007277,6.82e-08,6;UBERON:0001896,5.53e-07,2;UBERON:0002298,5.53e-07,2;UBERON:0005290,5.53e-07,2;UBERON:0010096,5.53e-07,2;UBERON:0002256,6.72e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,3.07374644257244,0,0,0,13.4255962669788,10.3808214247258,0,0,0,11.0115880999389,8.68273898979276,7.98753972932466,0,0,0,16.4717969410815,11.8180148106653,11.0014738399303,2.06240009831567,1.56608848879013,0,1.8931548333296,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.220841518460394,0,0,2.04946557908083,35.8153868651008,0,0,0,0,3.2953940669061,5.94750783664214,0,1.56441888173049,2.81287003063364,5.81806524766768,7.62533936418461,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5963389391943,16.8784828692773,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,3.22227665555024,4.58316410751517,2.92150409984269,4.11049511862385,0.755393897389701,3.37511250115903,0.900642406448441,1.81256963593682,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p7@Mbp | |||
}} |
Latest revision as of 19:02, 1 October 2015
Short description: | p7@Mbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Mbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:675 |
Association with transcript: | 1bp_to_uc012bfn.1_5end |
EntrezGene: | Mbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-10 | 23 |
neuron of the substantia nigra | 1.17e-09 | 3 |
raphe nuclei neuron | 2.69e-09 | 3 |
neural cell | 3.92e-08 | 43 |
ectodermal cell | 6.90e-08 | 44 |
neurectodermal cell | 6.90e-08 | 44 |
neuron of the dorsal spinal cord | 6.72e-07 | 2 |
neuron | 9.89e-07 | 33 |
neuronal stem cell | 9.89e-07 | 33 |
neuroblast | 9.89e-07 | 33 |
electrically signaling cell | 9.89e-07 | 33 |