FFCP PHASE1:Mm9::chr11:59263443..59263452,-: Difference between revisions
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{{FFCP|EntrezGene=67826|HGNC=|MCL_coexpression_id=13|UniProt=Q8R570|association_with_transcript=5bp_to_NM_144521,uc007jds.1,uc007jdt.1_5end|description=CAGE_peak_2_at_Snap47_5end|id=chr11:59263443..59263452,-|ontology_enrichment_celltype=CL:0000117!3.75e-14!23;CL:0000337!3.75e-14!23;CL:0000540!5.05e-10!33;CL:0000047!5.05e-10!33;CL:0000031!5.05e-10!33;CL:0000404!5.05e-10!33;CL:0002319!2.42e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000393!7.45e-08!39;CL:0000211!7.45e-08!39;CL:0000055!3.68e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-23,23;CL:0000337,2.69e-23,23;CL:0000540,2.59e-14,33;CL:0000047,2.59e-14,33;CL:0000031,2.59e-14,33;CL:0000404,2.59e-14,33;CL:0002319,7.31e-12,43;CL:0000221,1.91e-11,44;CL:0000133,1.91e-11,44;CL:0000393,3.51e-11,39;CL:0000211,3.51e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.32e-27!73;UBERON:0005743!5.32e-27!73;UBERON:0001049!2.18e-26!52;UBERON:0005068!2.18e-26!52;UBERON:0006241!2.18e-26!52;UBERON:0007135!2.18e-26!52;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0002346!2.93e-25!71;UBERON:0003075!2.93e-25!71;UBERON:0007284!2.93e-25!71;UBERON:0000955!1.06e-24!50;UBERON:0006238!1.06e-24!50;UBERON:0000033!2.72e-24!63;UBERON:0002616!3.66e-24!49;UBERON:0004121!2.30e-23!102;UBERON:0000924!2.30e-23!102;UBERON:0006601!2.30e-23!102;UBERON:0003056!4.53e-22!49;UBERON:0003080!2.42e-20!40;UBERON:0002020!3.86e-20!34;UBERON:0002780!1.12e-19!39;UBERON:0001890!1.12e-19!39;UBERON:0006240!1.12e-19!39;UBERON:0002791!1.96e-16!29;UBERON:0003528!1.96e-16!29;UBERON:0001893!1.96e-16!29;UBERON:0007811!1.94e-15!86;UBERON:0000153!2.13e-15!94;UBERON:0000956!1.93e-11!21;UBERON:0001869!1.93e-11!21;UBERON:0000203!1.93e-11!21;UBERON:0002619!3.24e-10!17;UBERON:0000025!5.10e-08!114;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-44,54;UBERON:0001049,4.76e-41,52;UBERON:0005068,4.76e-41,52;UBERON:0006241,4.76e-41,52;UBERON:0007135,4.76e-41,52;UBERON:0001017,1.29e-38,73;UBERON:0001016,3.27e-37,75;UBERON:0002346,2.89e-36,64;UBERON:0003075,2.89e-36,64;UBERON:0007284,2.89e-36,64;UBERON:0002020,8.30e-36,34;UBERON:0000955,2.68e-33,47;UBERON:0006238,2.68e-33,47;UBERON:0002616,3.01e-32,46;UBERON:0004121,1.31e-30,95;UBERON:0000924,1.31e-30,95;UBERON:0006601,1.31e-30,95;UBERON:0010371,3.50e-30,73;UBERON:0003080,2.61e-29,40;UBERON:0003528,3.44e-28,29;UBERON:0002791,3.44e-28,29;UBERON:0001893,3.44e-28,29;UBERON:0002780,5.19e-28,39;UBERON:0001890,5.19e-28,39;UBERON:0006240,5.19e-28,39;UBERON:0003056,3.97e-27,49;UBERON:0010314,2.22e-22,92;UBERON:0000956,5.63e-18,21;UBERON:0001869,5.63e-18,21;UBERON:0000203,5.63e-18,21;UBERON:0002619,2.47e-16,17;UBERON:0002021,2.77e-14,10;UBERON:0000411,2.77e-14,10;UBERON:0001950,2.77e-14,10;UBERON:0000025,9.81e-14,114;UBERON:0004111,4.79e-12,122;UBERON:0003076,1.29e-11,12;UBERON:0003057,1.29e-11,12;UBERON:0002420,1.72e-11,8;UBERON:0007245,1.72e-11,8;UBERON:0010009,1.72e-11,8;UBERON:0010011,1.72e-11,8;UBERON:0000454,1.72e-11,8;UBERON:0002240,5.86e-10,6;UBERON:0005174,5.86e-10,6;UBERON:0001137,5.86e-10,6;UBERON:0001948,7.93e-09,5;UBERON:0002315,7.93e-09,5;UBERON:0000369,2.24e-07,5;UBERON:0002435,2.24e-07,5;UBERON:0000204,2.24e-07,5;UBERON:0010082,2.24e-07,5;UBERON:0002950,5.90e-07,4;UBERON:0001891,5.90e-07,4;UBERON:0009616,5.90e-07,4;UBERON:0010286,5.90e-07,4|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.473193248037357,0.274228867211478,0,0.850432901510698,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0.65407546914134,1.75748946187577,1.74986909166855,0.419959264876088,0,0.335565212115473,0,0,0,0.286533439938757,0,4.85559506063035,5.81890077199236,4.43681982454325,0,0,0,0,0,0.898800331555214,0.768436610643109,0.414758449233911,1.21505344498522,1.26194976810829,7.7125765789027,10.3808214247258,0.857435594504678,0.670918297127655,2.75765635983006,9.91042928994498,8.04430229936683,8.90917892886212,5.14356522147756,8.23388792421687,7.8137005583514,9.49222196604695,7.31591393041184,6.87592114995646,7.95497180778903,10.8202477407318,9.31997229126503,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.561777680527007,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0.867426633830679,0.608930956624282,0,0.753613202763113,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,3.22058876712702,2.30391377494801,0,0,0,0,5.69204429738326,2.74500361691176,1.25654352112864,4.34560800480691,3.58001640262463,6.85700547046548,5.19172041816825,0.407357455401265,0,0.252722758433675,0,0.780722657776222,2.06911893990126,0.900310649026746,1.35634336052144,0.884474488967262,0.640568601424249,0.749613796477831,1.55222022443409,1.07783996466421,0.567318240503458,0.175951124163949,0.876782929710299,0.556094498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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67826 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R570 | |||
|association_with_transcript=5bp_to_NM_144521,uc007jds.1,uc007jdt.1_5end | |||
|cluster_id=chr11:59263443..59263452,- | |||
|description=CAGE_peak_2_at_Snap47_5end | |||
|id=chr11:59263443..59263452,- | |||
|ontology_enrichment_celltype=CL:0000117!3.75e-14!23;CL:0000337!3.75e-14!23;CL:0000540!5.05e-10!33;CL:0000047!5.05e-10!33;CL:0000031!5.05e-10!33;CL:0000404!5.05e-10!33;CL:0002319!2.42e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000393!7.45e-08!39;CL:0000211!7.45e-08!39;CL:0000055!3.68e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-23,23;CL:0000337,2.69e-23,23;CL:0000540,2.59e-14,33;CL:0000047,2.59e-14,33;CL:0000031,2.59e-14,33;CL:0000404,2.59e-14,33;CL:0002319,7.31e-12,43;CL:0000221,1.91e-11,44;CL:0000133,1.91e-11,44;CL:0000393,3.51e-11,39;CL:0000211,3.51e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.32e-27!73;UBERON:0005743!5.32e-27!73;UBERON:0001049!2.18e-26!52;UBERON:0005068!2.18e-26!52;UBERON:0006241!2.18e-26!52;UBERON:0007135!2.18e-26!52;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0002346!2.93e-25!71;UBERON:0003075!2.93e-25!71;UBERON:0007284!2.93e-25!71;UBERON:0000955!1.06e-24!50;UBERON:0006238!1.06e-24!50;UBERON:0000033!2.72e-24!63;UBERON:0002616!3.66e-24!49;UBERON:0004121!2.30e-23!102;UBERON:0000924!2.30e-23!102;UBERON:0006601!2.30e-23!102;UBERON:0003056!4.53e-22!49;UBERON:0003080!2.42e-20!40;UBERON:0002020!3.86e-20!34;UBERON:0002780!1.12e-19!39;UBERON:0001890!1.12e-19!39;UBERON:0006240!1.12e-19!39;UBERON:0002791!1.96e-16!29;UBERON:0003528!1.96e-16!29;UBERON:0001893!1.96e-16!29;UBERON:0007811!1.94e-15!86;UBERON:0000153!2.13e-15!94;UBERON:0000956!1.93e-11!21;UBERON:0001869!1.93e-11!21;UBERON:0000203!1.93e-11!21;UBERON:0002619!3.24e-10!17;UBERON:0000025!5.10e-08!114;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-44,54;UBERON:0001049,4.76e-41,52;UBERON:0005068,4.76e-41,52;UBERON:0006241,4.76e-41,52;UBERON:0007135,4.76e-41,52;UBERON:0001017,1.29e-38,73;UBERON:0001016,3.27e-37,75;UBERON:0002346,2.89e-36,64;UBERON:0003075,2.89e-36,64;UBERON:0007284,2.89e-36,64;UBERON:0002020,8.30e-36,34;UBERON:0000955,2.68e-33,47;UBERON:0006238,2.68e-33,47;UBERON:0002616,3.01e-32,46;UBERON:0004121,1.31e-30,95;UBERON:0000924,1.31e-30,95;UBERON:0006601,1.31e-30,95;UBERON:0010371,3.50e-30,73;UBERON:0003080,2.61e-29,40;UBERON:0003528,3.44e-28,29;UBERON:0002791,3.44e-28,29;UBERON:0001893,3.44e-28,29;UBERON:0002780,5.19e-28,39;UBERON:0001890,5.19e-28,39;UBERON:0006240,5.19e-28,39;UBERON:0003056,3.97e-27,49;UBERON:0010314,2.22e-22,92;UBERON:0000956,5.63e-18,21;UBERON:0001869,5.63e-18,21;UBERON:0000203,5.63e-18,21;UBERON:0002619,2.47e-16,17;UBERON:0002021,2.77e-14,10;UBERON:0000411,2.77e-14,10;UBERON:0001950,2.77e-14,10;UBERON:0000025,9.81e-14,114;UBERON:0004111,4.79e-12,122;UBERON:0003076,1.29e-11,12;UBERON:0003057,1.29e-11,12;UBERON:0002420,1.72e-11,8;UBERON:0007245,1.72e-11,8;UBERON:0010009,1.72e-11,8;UBERON:0010011,1.72e-11,8;UBERON:0000454,1.72e-11,8;UBERON:0002240,5.86e-10,6;UBERON:0005174,5.86e-10,6;UBERON:0001137,5.86e-10,6;UBERON:0001948,7.93e-09,5;UBERON:0002315,7.93e-09,5;UBERON:0000369,2.24e-07,5;UBERON:0002435,2.24e-07,5;UBERON:0000204,2.24e-07,5;UBERON:0010082,2.24e-07,5;UBERON:0002950,5.90e-07,4;UBERON:0001891,5.90e-07,4;UBERON:0009616,5.90e-07,4;UBERON:0010286,5.90e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.473193248037357,0.274228867211478,0,0.850432901510698,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0.65407546914134,1.75748946187577,1.74986909166855,0.419959264876088,0,0.335565212115473,0,0,0,0.286533439938757,0,4.85559506063035,5.81890077199236,4.43681982454325,0,0,0,0,0,0.898800331555214,0.768436610643109,0.414758449233911,1.21505344498522,1.26194976810829,7.7125765789027,10.3808214247258,0.857435594504678,0.670918297127655,2.75765635983006,9.91042928994498,8.04430229936683,8.90917892886212,5.14356522147756,8.23388792421687,7.8137005583514,9.49222196604695,7.31591393041184,6.87592114995646,7.95497180778903,10.8202477407318,9.31997229126503,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.561777680527007,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0.867426633830679,0.608930956624282,0,0.753613202763113,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,3.22058876712702,2.30391377494801,0,0,0,0,5.69204429738326,2.74500361691176,1.25654352112864,4.34560800480691,3.58001640262463,6.85700547046548,5.19172041816825,0.407357455401265,0,0.252722758433675,0,0.780722657776222,2.06911893990126,0.900310649026746,1.35634336052144,0.884474488967262,0.640568601424249,0.749613796477831,1.55222022443409,1.07783996466421,0.567318240503458,0.175951124163949,0.876782929710299,0.556094498451196,0.348252166522167,0,0.796137067273973,0,0,0,1.03562886267751,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,2.3131894342054,1.3377599609307,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.758671603812327,0.913988100877831,1.1270773567308,1.22190796707189,0.581857461502877,0.420814919341911,0.758838445491087,0.295220295959204,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,0,0.358794827043824,0,0.184753190166605,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0,0,0,0,0,0,0,7.06422595946285,4.68846746368813,0,0,0,0,0.215423397732799,0.477937595905104,0,0.566153061577665,0.404810701674894,0,0.395287777946524,1.60660658210904,0.425820255624806,0.178065603667255,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.720244376125241,0.776152102696527,0.643011105094777,1.24138163549592,1.42695054081656,0.987294123612726,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,4.63563255026274,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0.419437377702843,0,0,0,0.608175645870493,0.821687657318618,0.129920822977795,0.179026695667481,0.596044064343795,0.240390899039938,0.147689527174577,0,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,10.7302850097243,5.06357760157895,10.3121192419091,4.29632955859219,4.7955776383945,11.3309084608455,4.05013500139084,4.95353323546643,6.34399372577886,3.62432218226274,0.830298780673413,0,0.853668028770671,0.972426868273176,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,0.962757628775446,0.252697211763798,0.760437899670719,0.377252682772152,0.936415074698824,0.832326981263301,0.746661096422973,1.42888107384922,0.579421629724277,0.192909220463705,1.23625770240992,0.883193520806384,0.342869252385415,0.354951612318675,0.476872379894642,1.0174249164263,0.941093804153306,1.09998990259179,1.46342378298218,0,0.543216455383447,0,0.593175090620871,0.689531376628944,2.04615521584845,0.464810523557898,1.54325288784913,2.24829520144151,0.935726433781634,0.214871054048298,0.765153328275374,0.441182838239031,0 | |||
|short_description=p2@Snap47 | |||
}} |
Latest revision as of 19:15, 1 October 2015
Short description: | p2@Snap47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Snap47_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 5bp_to_NM_144521, uc007jds.1, uc007jdt.1_5end |
EntrezGene: | Snap47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.69e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-23 | 23 |
neuron | 2.59e-14 | 33 |
neuronal stem cell | 2.59e-14 | 33 |
neuroblast | 2.59e-14 | 33 |
electrically signaling cell | 2.59e-14 | 33 |
neural cell | 7.31e-12 | 43 |
ectodermal cell | 1.91e-11 | 44 |
neurectodermal cell | 1.91e-11 | 44 |
electrically responsive cell | 3.51e-11 | 39 |
electrically active cell | 3.51e-11 | 39 |