FFCP PHASE1:Mm9::chr8:17535608..17535632,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr8:17535608..17535632,- to FFCP PHASE1:Mm9::chr8:17535608..17535632,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94109 | |EntrezGene=94109 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENSMUST00000137947_5end | |||
|cluster_id=chr8:17535608..17535632,- | |||
|description=CAGE_peak_2_at_Csmd1_5end | |||
|id=chr8:17535608..17535632,- | |||
|ontology_enrichment_celltype=CL:0000221!1.55e-12!44;CL:0000133!1.55e-12!44;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0002319!3.20e-12!43;CL:0000055!1.65e-11!50;CL:0000540!2.24e-11!33;CL:0000047!2.24e-11!33;CL:0000031!2.24e-11!33;CL:0000404!2.24e-11!33;CL:0000393!4.34e-11!39;CL:0000211!4.34e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.88e-19,23;CL:0000337,5.88e-19,23;CL:0000540,4.47e-13,33;CL:0000047,4.47e-13,33;CL:0000031,4.47e-13,33;CL:0000404,4.47e-13,33;CL:0000393,1.05e-12,39;CL:0000211,1.05e-12,39;CL:0002319,6.21e-10,43;CL:0000221,1.39e-09,44;CL:0000133,1.39e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.16e-25!75;UBERON:0001016!3.16e-25!75;UBERON:0001017!1.98e-24!73;UBERON:0005743!1.98e-24!73;UBERON:0004121!1.87e-23!102;UBERON:0000924!1.87e-23!102;UBERON:0006601!1.87e-23!102;UBERON:0001049!7.35e-21!52;UBERON:0005068!7.35e-21!52;UBERON:0006241!7.35e-21!52;UBERON:0007135!7.35e-21!52;UBERON:0002020!6.53e-20!34;UBERON:0000033!8.32e-20!63;UBERON:0000955!1.22e-19!50;UBERON:0006238!1.22e-19!50;UBERON:0002346!3.07e-19!71;UBERON:0003075!3.07e-19!71;UBERON:0007284!3.07e-19!71;UBERON:0002616!5.42e-19!49;UBERON:0002791!1.22e-16!29;UBERON:0003528!1.22e-16!29;UBERON:0001893!1.22e-16!29;UBERON:0003080!1.80e-14!40;UBERON:0003056!3.42e-14!49;UBERON:0002780!7.34e-14!39;UBERON:0001890!7.34e-14!39;UBERON:0006240!7.34e-14!39;UBERON:0000956!6.99e-12!21;UBERON:0001869!6.99e-12!21;UBERON:0000203!6.99e-12!21;UBERON:0007811!2.21e-11!86;UBERON:0002619!3.67e-11!17;UBERON:0000153!7.05e-11!94;UBERON:0002021!4.65e-09!10;UBERON:0000411!4.65e-09!10;UBERON:0001950!4.65e-09!10;UBERON:0003076!3.06e-07!12;UBERON:0003057!3.06e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-33,54;UBERON:0002020,1.04e-31,34;UBERON:0001016,1.07e-31,75;UBERON:0001017,3.74e-31,73;UBERON:0001049,2.67e-30,52;UBERON:0005068,2.67e-30,52;UBERON:0006241,2.67e-30,52;UBERON:0007135,2.67e-30,52;UBERON:0003528,5.41e-25,29;UBERON:0002791,5.41e-25,29;UBERON:0001893,5.41e-25,29;UBERON:0000955,5.11e-24,47;UBERON:0006238,5.11e-24,47;UBERON:0002616,7.96e-23,46;UBERON:0002346,1.08e-22,64;UBERON:0003075,1.08e-22,64;UBERON:0007284,1.08e-22,64;UBERON:0004121,1.80e-22,95;UBERON:0000924,1.80e-22,95;UBERON:0006601,1.80e-22,95;UBERON:0003080,9.76e-22,40;UBERON:0002780,1.53e-20,39;UBERON:0001890,1.53e-20,39;UBERON:0006240,1.53e-20,39;UBERON:0010371,1.19e-18,73;UBERON:0002021,1.21e-17,10;UBERON:0000411,1.21e-17,10;UBERON:0001950,1.21e-17,10;UBERON:0002619,3.37e-17,17;UBERON:0003056,2.57e-16,49;UBERON:0000956,2.31e-15,21;UBERON:0001869,2.31e-15,21;UBERON:0000203,2.31e-15,21;UBERON:0010314,9.12e-13,92;UBERON:0002420,3.89e-11,8;UBERON:0007245,3.89e-11,8;UBERON:0010009,3.89e-11,8;UBERON:0010011,3.89e-11,8;UBERON:0000454,3.89e-11,8;UBERON:0000025,1.05e-10,114;UBERON:0004111,2.39e-09,122;UBERON:0002240,2.74e-09,6;UBERON:0005174,2.74e-09,6;UBERON:0001137,2.74e-09,6;UBERON:0003076,6.30e-09,12;UBERON:0003057,6.30e-09,12;UBERON:0001948,5.61e-08,5;UBERON:0002315,5.61e-08,5;UBERON:0000369,4.86e-07,5;UBERON:0002435,4.86e-07,5;UBERON:0000204,4.86e-07,5;UBERON:0010082,4.86e-07,5;UBERON:0002950,5.72e-07,4;UBERON:0001891,5.72e-07,4;UBERON:0009616,5.72e-07,4;UBERON:0010286,5.72e-07,4 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.709638518536602,2.0190142737785,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.03474691289397,2.64495489636016,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.898800331555214,0.384218305321555,0.725827286159344,0.675029691658453,0.210324961351382,4.85606673486466,5.07997644188711,1.10241719293459,1.0543001812006,0.919218786610021,8.8092704799511,6.63974158042976,6.45147439676223,3.42904348098504,1.46380229763855,1.04182674111352,5.02529398202486,14.069065250792,6.87592114995646,12.374400589894,6.40672563595963,3.72798891650601,0.530083353332288,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,6.21450920753212,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0.251333182659351,0.247194967734374,0.722996784599558,1.76922110389975,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,5.99162557619291,8.23501085073528,3.76963056338593,12.6891753740362,10.9957646652042,6.44142938134636,9.08551073179443,0.203678727700633,0.497627882440372,0.252722758433675,0.841767423545896,0.130120442962704,0,0.720248519221397,0.452114453507145,0.340182495756639,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,10.7247873767705,3.2929475961371,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.714130922658041,0.195133647857799,0.315270288212382,0.8858587585951,0.478364305972461,0,0.172684981865896,0,0,0,0,0.551873492609465,5.13761887960934,3.7507739709505,0,0.252470927204373,0,0.780877488593277,0.646270193198397,0,0.891194696329576,2.26461224631066,0,0.584511715822624,0.790575555893047,5.78378369559253,2.83880170416537,0.178065603667255,0.651547837414304,1.81467135269789,1.32745138339963,0.485561272309963,0.604647113929502,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.49465875882444,0,0.180938774784468,0.119372344003136,0,0.291480836629851,6.30446026835733,0.683483523191411,0,0,0,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0.258319646955462,0,0,0,0.209718688851422,0,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0.93841237725591,0.549454872801795,0.643105137237198,0,14.1187960654267,14.2700823317225,20.0513429703789,18.5601436931183,15.0718154349541,19.6402413321322,19.5756525067224,22.516060161211,16.7662691324156,19.6748918465692,0,0.399024873401031,0.853668028770671,1.45864030240976,0.209613162627982,0.919217542250071,0.666740183404846,1.64828045791115,0.64183841918363,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,0.960377286073039,0.861532034334199,0.952587382566147,1.50649623728312,0.77163688185482,1.64834360321323,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.658765662907314,0.846146078916765,0.548783918618318,0.789209134313529,0.407412341537585,0.561142271657738,0.949080144993393,0.788035859004508,0,1.08455788830176,0.964533054905707,1.99848462350357,1.16965804222704,1.28922632428979,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p2@Csmd1 | |||
}} | }} |
Latest revision as of 19:41, 1 October 2015
Short description: | p2@Csmd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csmd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -22bp_to_ENSMUST00000137947_5end |
EntrezGene: | Csmd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.88e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.88e-19 | 23 |
neuron | 4.47e-13 | 33 |
neuronal stem cell | 4.47e-13 | 33 |
neuroblast | 4.47e-13 | 33 |
electrically signaling cell | 4.47e-13 | 33 |
electrically responsive cell | 1.05e-12 | 39 |
electrically active cell | 1.05e-12 | 39 |
neural cell | 6.21e-10 | 43 |
ectodermal cell | 1.39e-09 | 44 |
neurectodermal cell | 1.39e-09 | 44 |