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FFCP PHASE1:Mm9::chr13:58909054..58909061,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:58909054..58909061,+
|DHSsupport=NA
|short_description=p7@Ntrk2
|DPIdataset=NA
|description=CAGE_peak_7_at_Ntrk2_5end
|association_with_transcript=-132bp_to_NM_001025074,uc007quj.1_5end
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P15209
|UniProt=P15209
|association_with_transcript=-132bp_to_NM_001025074,uc007quj.1_5end
|cluster_id=chr13:58909054..58909061,+
|description=CAGE_peak_7_at_Ntrk2_5end
|id=chr13:58909054..58909061,+
|ontology_enrichment_celltype=CL:0000117!4.99e-11!23;CL:0000337!4.99e-11!23;CL:0000221!2.37e-08!44;CL:0000133!2.37e-08!44;CL:0002319!3.37e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-14,23;CL:0000337,2.16e-14,23;CL:0002319,6.93e-13,43;CL:0000221,2.06e-12,44;CL:0000133,2.06e-12,44;CL:0000540,2.27e-08,33;CL:0000047,2.27e-08,33;CL:0000031,2.27e-08,33;CL:0000404,2.27e-08,33;CL:0002453,6.51e-08,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.47e-24!73;UBERON:0005743!3.47e-24!73;UBERON:0004121!5.54e-24!102;UBERON:0000924!5.54e-24!102;UBERON:0006601!5.54e-24!102;UBERON:0001049!1.33e-23!52;UBERON:0005068!1.33e-23!52;UBERON:0006241!1.33e-23!52;UBERON:0007135!1.33e-23!52;UBERON:0000073!1.48e-23!75;UBERON:0001016!1.48e-23!75;UBERON:0000033!1.99e-23!63;UBERON:0000955!1.10e-22!50;UBERON:0006238!1.10e-22!50;UBERON:0002346!4.90e-22!71;UBERON:0003075!4.90e-22!71;UBERON:0007284!4.90e-22!71;UBERON:0002616!5.77e-22!49;UBERON:0003056!3.53e-18!49;UBERON:0003080!2.19e-17!40;UBERON:0002780!8.83e-17!39;UBERON:0001890!8.83e-17!39;UBERON:0006240!8.83e-17!39;UBERON:0002020!4.31e-16!34;UBERON:0002791!8.70e-13!29;UBERON:0003528!8.70e-13!29;UBERON:0001893!8.70e-13!29;UBERON:0007811!1.12e-11!86;UBERON:0000153!1.87e-11!94;UBERON:0000956!1.29e-08!21;UBERON:0001869!1.29e-08!21;UBERON:0000203!1.29e-08!21;UBERON:0002619!7.87e-08!17;UBERON:0000025!2.31e-07!114;UBERON:0004111!2.45e-07!122;UBERON:0003076!7.53e-07!12;UBERON:0003057!7.53e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.87e-38,73;UBERON:0000073,1.09e-36,54;UBERON:0001016,1.12e-36,75;UBERON:0001049,2.27e-33,52;UBERON:0005068,2.27e-33,52;UBERON:0006241,2.27e-33,52;UBERON:0007135,2.27e-33,52;UBERON:0000955,7.94e-28,47;UBERON:0006238,7.94e-28,47;UBERON:0004121,1.10e-26,95;UBERON:0000924,1.10e-26,95;UBERON:0006601,1.10e-26,95;UBERON:0002616,1.18e-26,46;UBERON:0002346,1.45e-24,64;UBERON:0003075,1.45e-24,64;UBERON:0007284,1.45e-24,64;UBERON:0002020,3.36e-23,34;UBERON:0003080,3.57e-22,40;UBERON:0002780,3.59e-21,39;UBERON:0001890,3.59e-21,39;UBERON:0006240,3.59e-21,39;UBERON:0010371,6.68e-20,73;UBERON:0003528,1.43e-17,29;UBERON:0002791,1.43e-17,29;UBERON:0001893,1.43e-17,29;UBERON:0003056,2.74e-16,49;UBERON:0010314,5.21e-14,92;UBERON:0002619,6.81e-12,17;UBERON:0000025,7.24e-12,114;UBERON:0003076,1.10e-11,12;UBERON:0003057,1.10e-11,12;UBERON:0004111,6.68e-11,122;UBERON:0000956,1.53e-10,21;UBERON:0001869,1.53e-10,21;UBERON:0000203,1.53e-10,21;UBERON:0002021,3.09e-09,10;UBERON:0000411,3.09e-09,10;UBERON:0001950,3.09e-09,10;UBERON:0002420,9.74e-09,8;UBERON:0007245,9.74e-09,8;UBERON:0010009,9.74e-09,8;UBERON:0010011,9.74e-09,8;UBERON:0000454,9.74e-09,8;UBERON:0002240,7.76e-08,6;UBERON:0005174,7.76e-08,6;UBERON:0001137,7.76e-08,6;UBERON:0001948,3.03e-07,5;UBERON:0002315,3.03e-07,5;UBERON:0011216,3.76e-07,194
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,3.51497892375155,4.6663175777828,1.95980990275508,2.87505128729943,0,0,0,0,0,0,1.82084814773638,2.64495489636016,2.53532561402472,0,0.889294796111139,0,0,0,2.69640099466564,4.99483796918021,0.622137673850866,0.810035629990144,0.420649922702764,2.85650984403804,2.87129103237098,0.979926393719632,1.72521847832825,0,6.60695285996332,4.21368215681119,5.22262213071228,1.45074916503213,1.73826522844578,1.04182674111352,4.74611098302348,3.93933827022176,3.66715794664344,4.12480019663135,3.84403538157578,3.54158947068071,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.150722640552623,0.940709657085638,0.376999773989026,0,2.60278842455841,0,0.323533699894818,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,2.69623150928681,2.28750301409313,2.26177833803156,4.17178368461463,3.3243009452943,5.194701113989,4.38051410282946,2.44414473240759,0.497627882440372,0.252722758433675,0.631325567659422,0.910843100738926,0.459804208866946,0.540186389416048,0.452114453507145,0.680364991513279,0.768682321709099,0.749613796477831,0.517406741478031,0,0.378212160335639,0.175951124163949,0.219195732427575,0,1.74126083261083,0.823128545631774,1.59227413454795,0,0,0,0.207125772535502,0.234526059981096,0,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,3.15434922846191,1.44066457330998,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.630540576424764,0.221464689648775,0.637819074629948,0.491589944147214,1.03610989119537,1.73578870297814,0,0,0.983528546038072,0,2.0871576698413,2.69586879162067,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,3.53453448063988,0.709700426041343,5.34196811001766,2.76907830901079,2.14461159864296,0,1.21390318077491,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,1.29358683782755,1.92903331528433,0.886701168211368,1.42695054081656,1.97458824722545,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0.358117032009409,0,0,1.48340241608408,0,2.06386867963222,2.03713980106683,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.904118764344118,0.506868376472335,0.938857909166032,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0.93841237725591,0.183151624267265,0.857473516316263,0,2.82375921308533,1.38097570952153,2.29158205375759,2.23409137046794,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,2.71885445390523,1.55328093525546,0,1.99512436700516,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.824140228955577,2.24643446714271,1.01078884705519,0.760437899670719,1.13175804831646,0.936415074698824,0.89635213366817,0.804096565378586,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.953744759789284,1.0174249164263,0.752875043322645,0.676916863133412,1.09756783723664,2.10455769150274,1.22223702461276,0.561142271657738,0.355905054372522,0.788035859004508,0,0.464810523557898,1.15743966588685,2.49810577937946,0.935726433781634,0.859484216193193,1.72159498861959,0.882365676478062,0.927471342481686
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,3.51497892375155,4.6663175777828,1.95980990275508,2.87505128729943,0,0,0,0,0,0,1.82084814773638,2.64495489636016,2.53532561402472,0,0.889294796111139,0,0,0,2.69640099466564,4.99483796918021,0.622137673850866,0.810035629990144,0.420649922702764,2.85650984403804,2.87129103237098,0.979926393719632,1.72521847832825,0,6.60695285996332,4.21368215681119,5.22262213071228,1.45074916503213,1.73826522844578,1.04182674111352,4.74611098302348,3.93933827022176,3.66715794664344,4.12480019663135,3.84403538157578,3.54158947068071,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.150722640552623,0.940709657085638,0.376999773989026,0,2.60278842455841,0,0.323533699894818,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,2.69623150928681,2.28750301409313,2.26177833803156,4.17178368461463,3.3243009452943,5.194701113989,4.38051410282946,2.44414473240759,0.497627882440372,0.252722758433675,0.631325567659422,0.910843100738926,0.459804208866946,0.540186389416048,0.452114453507145,0.680364991513279,0.768682321709099,0.749613796477831,0.517406741478031,0,0.378212160335639,0.175951124163949,0.219195732427575,0,1.74126083261083,0.823128545631774,1.59227413454795,0,0,0,0.207125772535502,0.234526059981096,0,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,3.15434922846191,1.44066457330998,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.630540576424764,0.221464689648775,0.637819074629948,0.491589944147214,1.03610989119537,1.73578870297814,0,0,0.983528546038072,0,2.0871576698413,2.69586879162067,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,3.53453448063988,0.709700426041343,5.34196811001766,2.76907830901079,2.14461159864296,0,1.21390318077491,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,1.29358683782755,1.92903331528433,0.886701168211368,1.42695054081656,1.97458824722545,1.522324745573,0,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0.358117032009409,0,0,1.48340241608408,0,2.06386867963222,2.03713980106683,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.904118764344118,0.506868376472335,0.938857909166032,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0.93841237725591,0.183151624267265,0.857473516316263,0,2.82375921308533,1.38097570952153,2.29158205375759,2.23409137046794,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,2.71885445390523,1.55328093525546,0,1.99512436700516,0.682934423016537,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.824140228955577,2.24643446714271,1.01078884705519,0.760437899670719,1.13175804831646,0.936415074698824,0.89635213366817,0.804096565378586,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.953744759789284,1.0174249164263,0.752875043322645,0.676916863133412,1.09756783723664,2.10455769150274,1.22223702461276,0.561142271657738,0.355905054372522,0.788035859004508,0,0.464810523557898,1.15743966588685,2.49810577937946,0.935726433781634,0.859484216193193,1.72159498861959,0.882365676478062,0.927471342481686
|short_description=p7@Ntrk2
}}
}}

Latest revision as of 20:02, 1 October 2015

Short description:p7@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -132bp_to_NM_001025074, uc007quj.1_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.16e-1423
neuroblast (sensu Vertebrata)2.16e-1423
neural cell6.93e-1343
ectodermal cell2.06e-1244
neurectodermal cell2.06e-1244
neuron2.27e-0833
neuronal stem cell2.27e-0833
neuroblast2.27e-0833
electrically signaling cell2.27e-0833
oligodendrocyte precursor cell6.51e-088

Uber anatomy
Ontology termp-valuen
central nervous system3.87e-3873
regional part of nervous system1.09e-3654
nervous system1.12e-3675
neural tube2.27e-3352
neural rod2.27e-3352
future spinal cord2.27e-3352
neural keel2.27e-3352
brain7.94e-2847
future brain7.94e-2847
ectoderm-derived structure1.10e-2695
ectoderm1.10e-2695
presumptive ectoderm1.10e-2695
regional part of brain1.18e-2646
neurectoderm1.45e-2464
neural plate1.45e-2464
presumptive neural plate1.45e-2464
gray matter3.36e-2334
anterior neural tube3.57e-2240
regional part of forebrain3.59e-2139
forebrain3.59e-2139
future forebrain3.59e-2139
ecto-epithelium6.68e-2073
brain grey matter1.43e-1729
regional part of telencephalon1.43e-1729
telencephalon1.43e-1729
pre-chordal neural plate2.74e-1649
structure with developmental contribution from neural crest5.21e-1492
regional part of cerebral cortex6.81e-1217
tube7.24e-12114
posterior neural tube1.10e-1112
chordal neural plate1.10e-1112
anatomical conduit6.68e-11122
cerebral cortex1.53e-1021
cerebral hemisphere1.53e-1021
pallium1.53e-1021
occipital lobe3.09e-0910
visual cortex3.09e-0910
neocortex3.09e-0910
basal ganglion9.74e-098
nuclear complex of neuraxis9.74e-098
aggregate regional part of brain9.74e-098
collection of basal ganglia9.74e-098
cerebral subcortex9.74e-098
spinal cord7.76e-086
dorsal region element7.76e-086
dorsum7.76e-086
regional part of spinal cord3.03e-075
gray matter of spinal cord3.03e-075
organ system subdivision3.76e-07194
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