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FFCP PHASE1:Mm9::chr5:123582660..123582687,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:123582660..123582687,-
|DHSsupport=NA
|short_description=p3@Rhof
|DPIdataset=NA
|description=CAGE_peak_3_at_Rhof_5end
|association_with_transcript=13bp_to_ENSMUST00000031401_5end
|EntrezGene=23912
|EntrezGene=23912
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8BYP3
|UniProt=Q8BYP3
|association_with_transcript=13bp_to_ENSMUST00000031401_5end
|cluster_id=chr5:123582660..123582687,-
|description=CAGE_peak_3_at_Rhof_5end
|id=chr5:123582660..123582687,-
|ontology_enrichment_celltype=CL:0000117!3.01e-10!23;CL:0000337!3.01e-10!23;CL:0000791!7.97e-08!9;CL:0000789!7.97e-08!9;CL:0002420!7.97e-08!9;CL:0002419!7.97e-08!9;CL:0000790!7.97e-08!9;CL:0000624!3.61e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,1.28e-19,9;CL:0000789,1.28e-19,9;CL:0002420,1.28e-19,9;CL:0002419,1.28e-19,9;CL:0000790,1.28e-19,9;CL:0000624,9.79e-18,8;CL:0000084,1.08e-15,11;CL:0000827,1.08e-15,11;CL:0000838,3.18e-14,12;CL:0000893,1.72e-13,6;CL:0002489,1.72e-13,6;CL:0000898,1.72e-13,6;CL:0000809,1.72e-13,6;CL:0000810,1.72e-13,6;CL:0000895,1.72e-13,6;CL:0000808,1.72e-13,6;CL:0000894,1.72e-13,6;CL:0000806,1.72e-13,6;CL:0000807,1.72e-13,6;CL:0000805,1.72e-13,6;CL:0002425,1.72e-13,6;CL:0002436,1.72e-13,6;CL:0002427,1.72e-13,6;CL:0002428,1.72e-13,6;CL:0002429,1.72e-13,6;CL:0002433,1.72e-13,6;CL:0002431,1.72e-13,6;CL:0002432,1.72e-13,6;CL:0000542,5.59e-13,13;CL:0000051,5.59e-13,13;CL:0000117,1.37e-09,23;CL:0000337,1.37e-09,23;CL:0000738,1.79e-09,17;CL:0002087,1.79e-09,17;CL:0000034,1.59e-07,97;CL:0002031,3.17e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.76e-17!34;UBERON:0001049!2.69e-15!52;UBERON:0005068!2.69e-15!52;UBERON:0006241!2.69e-15!52;UBERON:0007135!2.69e-15!52;UBERON:0002791!3.16e-14!29;UBERON:0003528!3.16e-14!29;UBERON:0001893!3.16e-14!29;UBERON:0000064!6.86e-14!99;UBERON:0002616!7.45e-14!49;UBERON:0001017!2.20e-13!73;UBERON:0005743!2.20e-13!73;UBERON:0000955!3.48e-13!50;UBERON:0006238!3.48e-13!50;UBERON:0000073!9.72e-13!75;UBERON:0001016!9.72e-13!75;UBERON:0003080!1.13e-12!40;UBERON:0002780!2.89e-12!39;UBERON:0001890!2.89e-12!39;UBERON:0006240!2.89e-12!39;UBERON:0007811!2.27e-11!86;UBERON:0000956!1.86e-10!21;UBERON:0001869!1.86e-10!21;UBERON:0000203!1.86e-10!21;UBERON:0000153!1.02e-09!94;UBERON:0003056!1.74e-08!49;UBERON:0002619!2.69e-08!17;UBERON:0000033!3.26e-08!63;UBERON:0002346!3.92e-08!71;UBERON:0003075!3.92e-08!71;UBERON:0007284!3.92e-08!71;UBERON:0002021!7.32e-08!10;UBERON:0000411!7.32e-08!10;UBERON:0001950!7.32e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.74e-23,34;UBERON:0003528,1.63e-17,29;UBERON:0002791,1.63e-17,29;UBERON:0001893,1.63e-17,29;UBERON:0000073,7.04e-17,54;UBERON:0002021,9.72e-17,10;UBERON:0000411,9.72e-17,10;UBERON:0001950,9.72e-17,10;UBERON:0000956,3.58e-15,21;UBERON:0001869,3.58e-15,21;UBERON:0000203,3.58e-15,21;UBERON:0001049,1.03e-14,52;UBERON:0005068,1.03e-14,52;UBERON:0006241,1.03e-14,52;UBERON:0007135,1.03e-14,52;UBERON:0001017,2.26e-14,73;UBERON:0002619,7.31e-14,17;UBERON:0001016,8.16e-14,75;UBERON:0002780,1.81e-13,39;UBERON:0001890,1.81e-13,39;UBERON:0006240,1.81e-13,39;UBERON:0003080,5.06e-13,40;UBERON:0002346,6.17e-11,64;UBERON:0003075,6.17e-11,64;UBERON:0007284,6.17e-11,64;UBERON:0002616,9.44e-11,46;UBERON:0000955,1.98e-10,47;UBERON:0006238,1.98e-10,47;UBERON:0003056,7.89e-10,49;UBERON:0004121,1.49e-09,95;UBERON:0000924,1.49e-09,95;UBERON:0006601,1.49e-09,95;UBERON:0010371,6.18e-09,73;UBERON:0001948,2.90e-07,5;UBERON:0002315,2.90e-07,5
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,2.00358291978539,0.33575854382378,0.233612640595526,3.61545305636414,19.7104211012333,14.7460651582856,3.08192342805909,2.23362045186942,2.05440875917447,2.71003247498892,0.333109761815663,0.202475267389826,0,2.20823515750766,0.959801035240171,0.84877930359606,0.425216450755349,0.198581902401771,0,0.47997726838022,0.22940928106717,0,0,0.646413698057667,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.933206510776299,1.89008313664367,0.841299845405528,3.14216082844184,2.42955395046775,0.367472397644862,0.383381884072945,0,1.10115880999389,1.27687338085188,0.46081959976873,0.791317726381163,0.823388792421687,1.04182674111352,0.558365998002762,0.56276261003168,1.22238598221448,2.06240009831567,2.27794689278565,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.255457055208591,0.718890747035522,0.599902730993408,0.381210681219194,0.748953197024114,1.37250180845588,2.38743269014442,2.60736480288415,2.04572365864264,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,2.3131894342054,4.01327988279209,1.32167513193519,0,0,0,0.128867461322093,0.201683524623343,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.80275294993896,0.468846746368813,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,0.18542530201051,0.683483523191411,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0,1.69978429993855,1.6794174278839,2.9021994498929,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0.972255941720238,0,0.506868376472335,0.234714477291508,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.605798699688886,0.609654453239999,0.604957110821043,0.38983152295901,0.769694733122636,0.935015217452552,0,0,0,0,0,0,0,0,0,5.64751842617067,5.06357760157895,4.01026859407578,2.92150409984269,0.685082519770642,2.2661816921691,3.37511250115903,1.35096360967266,1.81256963593682,2.07104124700728,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.38581844092741,1.64834360321323,0.441596760403192,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0.231867835620421
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,2.00358291978539,0.33575854382378,0.233612640595526,3.61545305636414,19.7104211012333,14.7460651582856,3.08192342805909,2.23362045186942,2.05440875917447,2.71003247498892,0.333109761815663,0.202475267389826,0,2.20823515750766,0.959801035240171,0.84877930359606,0.425216450755349,0.198581902401771,0,0.47997726838022,0.22940928106717,0,0,0.646413698057667,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.933206510776299,1.89008313664367,0.841299845405528,3.14216082844184,2.42955395046775,0.367472397644862,0.383381884072945,0,1.10115880999389,1.27687338085188,0.46081959976873,0.791317726381163,0.823388792421687,1.04182674111352,0.558365998002762,0.56276261003168,1.22238598221448,2.06240009831567,2.27794689278565,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.255457055208591,0.718890747035522,0.599902730993408,0.381210681219194,0.748953197024114,1.37250180845588,2.38743269014442,2.60736480288415,2.04572365864264,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,2.3131894342054,4.01327988279209,1.32167513193519,0,0,0,0.128867461322093,0.201683524623343,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.80275294993896,0.468846746368813,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,0.18542530201051,0.683483523191411,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0,1.69978429993855,1.6794174278839,2.9021994498929,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0.972255941720238,0,0.506868376472335,0.234714477291508,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.605798699688886,0.609654453239999,0.604957110821043,0.38983152295901,0.769694733122636,0.935015217452552,0,0,0,0,0,0,0,0,0,5.64751842617067,5.06357760157895,4.01026859407578,2.92150409984269,0.685082519770642,2.2661816921691,3.37511250115903,1.35096360967266,1.81256963593682,2.07104124700728,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.38581844092741,1.64834360321323,0.441596760403192,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0.231867835620421
|short_description=p3@Rhof
}}
}}

Latest revision as of 20:47, 1 October 2015

Short description:p3@Rhof
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rhof_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 13bp_to_ENSMUST00000031401_5end
EntrezGene:Rhof
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rhof

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.28e-199
alpha-beta T cell1.28e-199
immature T cell1.28e-199
mature T cell1.28e-199
immature alpha-beta T cell1.28e-199
CD4-positive, alpha-beta T cell9.79e-188
T cell1.08e-1511
pro-T cell1.08e-1511
lymphoid lineage restricted progenitor cell3.18e-1412
thymocyte1.72e-136
double negative thymocyte1.72e-136
naive T cell1.72e-136
double-positive, alpha-beta thymocyte1.72e-136
CD4-positive, alpha-beta thymocyte1.72e-136
naive thymus-derived CD4-positive, alpha-beta T cell1.72e-136
DN4 thymocyte1.72e-136
DN1 thymic pro-T cell1.72e-136
DN2 thymocyte1.72e-136
DN3 thymocyte1.72e-136
immature single positive thymocyte1.72e-136
early T lineage precursor1.72e-136
mature CD4 single-positive thymocyte1.72e-136
resting double-positive thymocyte1.72e-136
double-positive blast1.72e-136
CD69-positive double-positive thymocyte1.72e-136
CD69-positive, CD4-positive single-positive thymocyte1.72e-136
CD4-positive, CD8-intermediate double-positive thymocyte1.72e-136
CD24-positive, CD4 single-positive thymocyte1.72e-136
lymphocyte5.59e-1313
common lymphoid progenitor5.59e-1313
CNS neuron (sensu Vertebrata)1.37e-0923
neuroblast (sensu Vertebrata)1.37e-0923
leukocyte1.79e-0917
nongranular leukocyte1.79e-0917
stem cell1.59e-0797
hematopoietic lineage restricted progenitor cell3.17e-0725

Uber anatomy
Ontology termp-valuen
gray matter3.74e-2334
brain grey matter1.63e-1729
regional part of telencephalon1.63e-1729
telencephalon1.63e-1729
regional part of nervous system7.04e-1754
occipital lobe9.72e-1710
visual cortex9.72e-1710
neocortex9.72e-1710
cerebral cortex3.58e-1521
cerebral hemisphere3.58e-1521
pallium3.58e-1521
neural tube1.03e-1452
neural rod1.03e-1452
future spinal cord1.03e-1452
neural keel1.03e-1452
central nervous system2.26e-1473
regional part of cerebral cortex7.31e-1417
nervous system8.16e-1475
regional part of forebrain1.81e-1339
forebrain1.81e-1339
future forebrain1.81e-1339
anterior neural tube5.06e-1340
neurectoderm6.17e-1164
neural plate6.17e-1164
presumptive neural plate6.17e-1164
regional part of brain9.44e-1146
brain1.98e-1047
future brain1.98e-1047
pre-chordal neural plate7.89e-1049
ectoderm-derived structure1.49e-0995
ectoderm1.49e-0995
presumptive ectoderm1.49e-0995
ecto-epithelium6.18e-0973
regional part of spinal cord2.90e-075
gray matter of spinal cord2.90e-075
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