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FFCP PHASE1:Mm9::chr3:26230776..26230823,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=192167
|EntrezGene=192167
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99K10
|UniProt=Q99K10
|association_with_transcript=7bp_to_NM_138666,uc008otc.1,uc008otd.1_5end
|association_with_transcript=7bp_to_NM_138666,uc008otc.1,uc008otd.1_5end
|cluster_id=chr3:26230776..26230823,-
|description=CAGE_peak_1_at_Nlgn1_5end
|description=CAGE_peak_1_at_Nlgn1_5end
|id=chr3:26230776..26230823,-
|id=chr3:26230776..26230823,-
|ontology_enrichment_celltype=CL:0000117!8.30e-14!23;CL:0000337!8.30e-14!23;CL:0000540!8.94e-11!33;CL:0000047!8.94e-11!33;CL:0000031!8.94e-11!33;CL:0000404!8.94e-11!33;CL:0000221!1.12e-08!44;CL:0000133!1.12e-08!44;CL:0002319!1.15e-08!43;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.78e-19,23;CL:0000337,7.78e-19,23;CL:0000540,1.46e-11,33;CL:0000047,1.46e-11,33;CL:0000031,1.46e-11,33;CL:0000404,1.46e-11,33;CL:0000393,1.46e-08,39;CL:0000211,1.46e-08,39;CL:0002319,1.97e-08,43;CL:0000221,4.65e-08,44;CL:0000133,4.65e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.25e-26!71;UBERON:0003075!1.25e-26!71;UBERON:0007284!1.25e-26!71;UBERON:0000033!6.40e-25!63;UBERON:0003056!3.01e-24!49;UBERON:0001017!5.46e-24!73;UBERON:0005743!5.46e-24!73;UBERON:0000073!5.94e-23!75;UBERON:0001016!5.94e-23!75;UBERON:0001049!6.44e-23!52;UBERON:0005068!6.44e-23!52;UBERON:0006241!6.44e-23!52;UBERON:0007135!6.44e-23!52;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0000955!1.18e-21!50;UBERON:0006238!1.18e-21!50;UBERON:0002616!6.20e-21!49;UBERON:0002020!1.07e-20!34;UBERON:0003080!6.64e-19!40;UBERON:0002780!2.99e-18!39;UBERON:0001890!2.99e-18!39;UBERON:0006240!2.99e-18!39;UBERON:0002791!1.20e-17!29;UBERON:0003528!1.20e-17!29;UBERON:0001893!1.20e-17!29;UBERON:0007811!1.48e-16!86;UBERON:0000153!8.68e-16!94;UBERON:0000956!4.55e-13!21;UBERON:0001869!4.55e-13!21;UBERON:0000203!4.55e-13!21;UBERON:0002619!1.81e-10!17;UBERON:0002021!7.53e-09!10;UBERON:0000411!7.53e-09!10;UBERON:0001950!7.53e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.57e-35,64;UBERON:0003075,7.57e-35,64;UBERON:0007284,7.57e-35,64;UBERON:0003056,8.05e-32,49;UBERON:0000073,2.03e-31,54;UBERON:0001049,9.39e-30,52;UBERON:0005068,9.39e-30,52;UBERON:0006241,9.39e-30,52;UBERON:0007135,9.39e-30,52;UBERON:0002020,4.81e-29,34;UBERON:0010371,4.59e-28,73;UBERON:0001017,2.97e-26,73;UBERON:0004121,4.29e-26,95;UBERON:0000924,4.29e-26,95;UBERON:0006601,4.29e-26,95;UBERON:0000955,1.40e-25,47;UBERON:0006238,1.40e-25,47;UBERON:0001016,4.88e-25,75;UBERON:0003528,9.99e-25,29;UBERON:0002791,9.99e-25,29;UBERON:0001893,9.99e-25,29;UBERON:0002616,1.34e-24,46;UBERON:0003080,2.41e-24,40;UBERON:0002780,1.95e-23,39;UBERON:0001890,1.95e-23,39;UBERON:0006240,1.95e-23,39;UBERON:0010314,2.86e-18,92;UBERON:0000956,3.02e-18,21;UBERON:0001869,3.02e-18,21;UBERON:0000203,3.02e-18,21;UBERON:0002619,1.44e-14,17;UBERON:0002021,7.65e-12,10;UBERON:0000411,7.65e-12,10;UBERON:0001950,7.65e-12,10;UBERON:0000970,4.53e-08,9;UBERON:0000019,4.53e-08,9;UBERON:0000047,4.53e-08,9;UBERON:0010312,4.53e-08,9;UBERON:0004088,4.53e-08,9;UBERON:0002104,4.53e-08,9;UBERON:0001456,4.53e-08,9;UBERON:0003072,4.53e-08,9;UBERON:0004128,4.53e-08,9;UBERON:0003071,4.53e-08,9;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8;UBERON:0000025,1.63e-07,114
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,1.55543919259427,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,11.3021677416241,8.91039192989158,9.88527318351495,5.71301968807607,4.41737081903227,4.40966877173835,3.06705507258356,4.5960939330501,4.40463523997555,6.00130489000382,4.76180253094355,3.95658863190582,5.48925861614458,5.73004707612436,6.14202597803038,6.75315132038016,9.62628960993904,9.72274332063103,9.25415925194169,5.77838282058432,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,9.58660092190865,15.5550204958333,2.76439574648302,17.5562563394199,17.6443665557928,5.61027720310812,9.08551073179443,1.01839363850316,0.124406970610093,0,1.47309299120532,3.90361328888111,4.59804208866946,5.40186389416048,12.9606143338715,14.8999933141408,11.4021211053516,12.5560310910037,4.65666067330228,0.215567992932842,0,0.703804496655795,1.09597866213787,2.50242524303038,0,0.411564272815887,0.995171334092466,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,20.8187049078486,14.9211687949962,0,0,0.426576501070468,2.78684006232526,1.15980715189884,0.605050573870028,1.11189021922435,0.760902504450237,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,1.19021820443007,0.390267295715598,1.7339865851681,1.32878813789265,0.956728611944923,0.163863314715738,0,0,0,0,0,0.551873492609465,4.0137647496948,4.33683240391152,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,1.58115111178609,14.4594592389813,0.567760340833074,0.890328018336276,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,1.98067203434441,0.517434735131018,0.214337035031592,1.41872186913819,1.42695054081656,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0.58678619322877,0.39061315453185,0,0,0,0.948033361884535,0,0.205421914329655,0.51968329191118,0.537080087002444,0,0.240390899039938,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.487289403698762,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0.501572104035363,29.9318476587045,22.0956113523445,18.3326564300607,16.6697586873377,18.4972280338073,13.5970901530146,20.925697507186,21.1650965515384,19.0319811773366,19.1571315348173,0.103787347584177,1.19707462020309,1.70733605754134,2.43106717068294,0.838452650511929,0.735374033800057,1.55572709461131,2.67845574410562,2.24643446714271,2.02157769411038,3.54871019846336,3.58390048633545,2.1537546718073,2.43295579138503,1.78049953762401,2.38146845641537,2.78122382267653,2.31491064556446,3.29668720642645,3.09117732282234,2.40008476669791,3.19456451086807,2.14592570952589,2.61623549938191,1.78807822789128,1.86152137361688,3.84148743032822,1.57841826862706,1.22223702461276,1.68342681497322,1.54225523561426,2.1670986122624,2.45538625901814,1.39443157067369,1.15743966588685,1.74867404556562,0.701794825336225,1.50409737833809,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,1.55543919259427,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,11.3021677416241,8.91039192989158,9.88527318351495,5.71301968807607,4.41737081903227,4.40966877173835,3.06705507258356,4.5960939330501,4.40463523997555,6.00130489000382,4.76180253094355,3.95658863190582,5.48925861614458,5.73004707612436,6.14202597803038,6.75315132038016,9.62628960993904,9.72274332063103,9.25415925194169,5.77838282058432,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,9.58660092190865,15.5550204958333,2.76439574648302,17.5562563394199,17.6443665557928,5.61027720310812,9.08551073179443,1.01839363850316,0.124406970610093,0,1.47309299120532,3.90361328888111,4.59804208866946,5.40186389416048,12.9606143338715,14.8999933141408,11.4021211053516,12.5560310910037,4.65666067330228,0.215567992932842,0,0.703804496655795,1.09597866213787,2.50242524303038,0,0.411564272815887,0.995171334092466,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,20.8187049078486,14.9211687949962,0,0,0.426576501070468,2.78684006232526,1.15980715189884,0.605050573870028,1.11189021922435,0.760902504450237,0.474529061544512,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,1.19021820443007,0.390267295715598,1.7339865851681,1.32878813789265,0.956728611944923,0.163863314715738,0,0,0,0,0,0.551873492609465,4.0137647496948,4.33683240391152,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,1.58115111178609,14.4594592389813,0.567760340833074,0.890328018336276,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,1.98067203434441,0.517434735131018,0.214337035031592,1.41872186913819,1.42695054081656,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0.58678619322877,0.39061315453185,0,0,0,0.948033361884535,0,0.205421914329655,0.51968329191118,0.537080087002444,0,0.240390899039938,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.487289403698762,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0.501572104035363,29.9318476587045,22.0956113523445,18.3326564300607,16.6697586873377,18.4972280338073,13.5970901530146,20.925697507186,21.1650965515384,19.0319811773366,19.1571315348173,0.103787347584177,1.19707462020309,1.70733605754134,2.43106717068294,0.838452650511929,0.735374033800057,1.55572709461131,2.67845574410562,2.24643446714271,2.02157769411038,3.54871019846336,3.58390048633545,2.1537546718073,2.43295579138503,1.78049953762401,2.38146845641537,2.78122382267653,2.31491064556446,3.29668720642645,3.09117732282234,2.40008476669791,3.19456451086807,2.14592570952589,2.61623549938191,1.78807822789128,1.86152137361688,3.84148743032822,1.57841826862706,1.22223702461276,1.68342681497322,1.54225523561426,2.1670986122624,2.45538625901814,1.39443157067369,1.15743966588685,1.74867404556562,0.701794825336225,1.50409737833809,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p1@Nlgn1
|short_description=p1@Nlgn1
}}
}}

Latest revision as of 21:45, 1 October 2015

Short description:p1@Nlgn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nlgn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 7bp_to_NM_138666, uc008otc.1, uc008otd.1_5end
EntrezGene:Nlgn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nlgn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D412.96
eyeball, neonate N00.CNhs11207.633-15C614.90
eyeball, neonate N01.CNhs11140.1532-43E711.40
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E820.82
hippocampus, neonate N00.CNhs11228.627-43G114.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.78e-1923
neuroblast (sensu Vertebrata)7.78e-1923
neuron1.46e-1133
neuronal stem cell1.46e-1133
neuroblast1.46e-1133
electrically signaling cell1.46e-1133
electrically responsive cell1.46e-0839
electrically active cell1.46e-0839
neural cell1.97e-0843
ectodermal cell4.65e-0844
neurectodermal cell4.65e-0844

Uber anatomy
Ontology termp-valuen
neurectoderm7.57e-3564
neural plate7.57e-3564
presumptive neural plate7.57e-3564
pre-chordal neural plate8.05e-3249
regional part of nervous system2.03e-3154
neural tube9.39e-3052
neural rod9.39e-3052
future spinal cord9.39e-3052
neural keel9.39e-3052
gray matter4.81e-2934
ecto-epithelium4.59e-2873
central nervous system2.97e-2673
ectoderm-derived structure4.29e-2695
ectoderm4.29e-2695
presumptive ectoderm4.29e-2695
brain1.40e-2547
future brain1.40e-2547
nervous system4.88e-2575
brain grey matter9.99e-2529
regional part of telencephalon9.99e-2529
telencephalon9.99e-2529
regional part of brain1.34e-2446
anterior neural tube2.41e-2440
regional part of forebrain1.95e-2339
forebrain1.95e-2339
future forebrain1.95e-2339
structure with developmental contribution from neural crest2.86e-1892
cerebral cortex3.02e-1821
cerebral hemisphere3.02e-1821
pallium3.02e-1821
regional part of cerebral cortex1.44e-1417
occipital lobe7.65e-1210
visual cortex7.65e-1210
neocortex7.65e-1210
eye4.53e-089
camera-type eye4.53e-089
simple eye4.53e-089
immature eye4.53e-089
ocular region4.53e-089
visual system4.53e-089
face4.53e-089
optic cup4.53e-089
optic vesicle4.53e-089
eye primordium4.53e-089
basal ganglion1.45e-078
nuclear complex of neuraxis1.45e-078
aggregate regional part of brain1.45e-078
collection of basal ganglia1.45e-078
cerebral subcortex1.45e-078
tube1.63e-07114
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