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FFCP PHASE1:Mm9::chr5:125342647..125342663,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:125342647..125342663,-
|DHSsupport=NA
|short_description=p5@Ccdc92
|DPIdataset=NA
|description=CAGE_peak_5_at_Ccdc92_5end
|association_with_transcript=-56bp_to_NM_144819,uc008zqr.1_5end
|EntrezGene=215707
|EntrezGene=215707
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q8VDN4
|UniProt=Q8VDN4
|association_with_transcript=-56bp_to_NM_144819,uc008zqr.1_5end
|cluster_id=chr5:125342647..125342663,-
|description=CAGE_peak_5_at_Ccdc92_5end
|id=chr5:125342647..125342663,-
|ontology_enrichment_celltype=CL:0000117!1.42e-11!23;CL:0000337!1.42e-11!23;CL:0000540!3.57e-08!33;CL:0000047!3.57e-08!33;CL:0000031!3.57e-08!33;CL:0000404!3.57e-08!33;CL:0002319!6.13e-08!43;CL:0000221!1.82e-07!44;CL:0000133!1.82e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.86e-19,23;CL:0000337,9.86e-19,23;CL:0000540,1.20e-11,33;CL:0000047,1.20e-11,33;CL:0000031,1.20e-11,33;CL:0000404,1.20e-11,33;CL:0002319,3.25e-10,43;CL:0000221,7.18e-10,44;CL:0000133,7.18e-10,44;CL:0000393,3.56e-09,39;CL:0000211,3.56e-09,39;CL:0002610,9.65e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.62e-23!75;UBERON:0001016!1.62e-23!75;UBERON:0001017!4.89e-23!73;UBERON:0005743!4.89e-23!73;UBERON:0002346!1.04e-22!71;UBERON:0003075!1.04e-22!71;UBERON:0007284!1.04e-22!71;UBERON:0004121!1.26e-22!102;UBERON:0000924!1.26e-22!102;UBERON:0006601!1.26e-22!102;UBERON:0001049!1.08e-21!52;UBERON:0005068!1.08e-21!52;UBERON:0006241!1.08e-21!52;UBERON:0007135!1.08e-21!52;UBERON:0000955!2.57e-20!50;UBERON:0006238!2.57e-20!50;UBERON:0002616!1.29e-19!49;UBERON:0000033!2.13e-19!63;UBERON:0003056!9.16e-17!49;UBERON:0002020!5.90e-16!34;UBERON:0003080!2.63e-15!40;UBERON:0002780!1.36e-14!39;UBERON:0001890!1.36e-14!39;UBERON:0006240!1.36e-14!39;UBERON:0002791!1.42e-12!29;UBERON:0003528!1.42e-12!29;UBERON:0001893!1.42e-12!29;UBERON:0007811!9.32e-10!86;UBERON:0000153!2.43e-08!94;UBERON:0000956!8.00e-08!21;UBERON:0001869!8.00e-08!21;UBERON:0000203!8.00e-08!21;UBERON:0002021!3.27e-07!10;UBERON:0000411!3.27e-07!10;UBERON:0001950!3.27e-07!10;UBERON:0003076!3.67e-07!12;UBERON:0003057!3.67e-07!12;UBERON:0002619!5.95e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.88e-39,54;UBERON:0001016,8.77e-39,75;UBERON:0001017,3.58e-38,73;UBERON:0001049,3.78e-36,52;UBERON:0005068,3.78e-36,52;UBERON:0006241,3.78e-36,52;UBERON:0007135,3.78e-36,52;UBERON:0004121,9.41e-30,95;UBERON:0000924,9.41e-30,95;UBERON:0006601,9.41e-30,95;UBERON:0002346,2.91e-29,64;UBERON:0003075,2.91e-29,64;UBERON:0007284,2.91e-29,64;UBERON:0000955,2.29e-28,47;UBERON:0006238,2.29e-28,47;UBERON:0002616,6.27e-27,46;UBERON:0002020,5.57e-26,34;UBERON:0010371,1.97e-24,73;UBERON:0003080,2.31e-22,40;UBERON:0002780,6.72e-21,39;UBERON:0001890,6.72e-21,39;UBERON:0006240,6.72e-21,39;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0003056,1.90e-18,49;UBERON:0010314,2.32e-17,92;UBERON:0002021,6.72e-15,10;UBERON:0000411,6.72e-15,10;UBERON:0001950,6.72e-15,10;UBERON:0003076,1.13e-14,12;UBERON:0003057,1.13e-14,12;UBERON:0002420,6.55e-13,8;UBERON:0007245,6.55e-13,8;UBERON:0010009,6.55e-13,8;UBERON:0010011,6.55e-13,8;UBERON:0000454,6.55e-13,8;UBERON:0000025,2.75e-11,114;UBERON:0002240,3.37e-11,6;UBERON:0005174,3.37e-11,6;UBERON:0001137,3.37e-11,6;UBERON:0004111,6.03e-10,122;UBERON:0002619,1.11e-09,17;UBERON:0001948,2.34e-09,5;UBERON:0002315,2.34e-09,5;UBERON:0000956,5.50e-09,21;UBERON:0001869,5.50e-09,21;UBERON:0000203,5.50e-09,21;UBERON:0000369,3.42e-08,5;UBERON:0002435,3.42e-08,5;UBERON:0000204,3.42e-08,5;UBERON:0010082,3.42e-08,5;UBERON:0011216,4.08e-08,194;UBERON:0002950,5.09e-08,4;UBERON:0001891,5.09e-08,4;UBERON:0009616,5.09e-08,4;UBERON:0010286,5.09e-08,4;UBERON:0004684,9.65e-07,3;UBERON:0002275,9.65e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0,0,0.34968160967599,0,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0.95995453676044,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0.777719596297134,0.139986421625363,2.87505128729943,0.503347818173209,0,0,0,0,0.515672092277442,1.82084814773638,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,4.8591079009355,0.367472397644862,0.575072826109418,0,7.70811166995721,5.2351808614927,8.29475279583715,2.2420668914133,2.10421580285542,1.04182674111352,7.53794097303729,3.37657566019008,4.73674568108111,4.71405736757868,5.83723891276322,2.23679334990361,0.151452386666368,1.66257432234928,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,6.74057877321702,8.6925114535539,1.38219787324151,3.82413504423008,1.79000820131231,7.68815764870372,3.56930778749067,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.0937017245597288,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,3.36463917702604,0.617427674275707,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,8.50918126935297,7.85318300167761,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,3.85585579706168,0,0,0.325773918707152,0.164970122972535,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,1.03486947026204,0.214337035031592,0,0.713475270408282,0.164549020602121,1.2178597964584,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,12.2380699326936,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0,0,0,0.419437377702843,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,0,0,0,0,1.6942555278512,3.22227665555024,1.14579102687879,1.71853182343688,2.05524755931193,3.0215755895588,1.35004500046361,3.60256962579376,3.62513927187364,5.69536342927002,0.207574695168353,0.399024873401031,0.853668028770671,0.486213434136588,0.838452650511929,0.551530525350042,0.888986911206461,0.618105171716683,1.28367683836726,2.02157769411038,0,0.188626341386076,0.749132059759059,0.704276676453562,0.459483751644906,0.476293691283074,0,1.15745532278223,0,1.03039244094078,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.464810523557898,0.771626443924566,0.999242311751784,0,0.429742108096597,0.765153328275374,0.661774257358546,1.15933917810211
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0,0,0.34968160967599,0,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0.95995453676044,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0.777719596297134,0.139986421625363,2.87505128729943,0.503347818173209,0,0,0,0,0.515672092277442,1.82084814773638,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,4.8591079009355,0.367472397644862,0.575072826109418,0,7.70811166995721,5.2351808614927,8.29475279583715,2.2420668914133,2.10421580285542,1.04182674111352,7.53794097303729,3.37657566019008,4.73674568108111,4.71405736757868,5.83723891276322,2.23679334990361,0.151452386666368,1.66257432234928,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,6.74057877321702,8.6925114535539,1.38219787324151,3.82413504423008,1.79000820131231,7.68815764870372,3.56930778749067,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.512454881139399,0.0937017245597288,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,3.36463917702604,0.617427674275707,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,8.50918126935297,7.85318300167761,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,3.85585579706168,0,0,0.325773918707152,0.164970122972535,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,1.03486947026204,0.214337035031592,0,0.713475270408282,0.164549020602121,1.2178597964584,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,12.2380699326936,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0,0,0,0.419437377702843,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0.579568782096571,0,0,0,0,1.6942555278512,3.22227665555024,1.14579102687879,1.71853182343688,2.05524755931193,3.0215755895588,1.35004500046361,3.60256962579376,3.62513927187364,5.69536342927002,0.207574695168353,0.399024873401031,0.853668028770671,0.486213434136588,0.838452650511929,0.551530525350042,0.888986911206461,0.618105171716683,1.28367683836726,2.02157769411038,0,0.188626341386076,0.749132059759059,0.704276676453562,0.459483751644906,0.476293691283074,0,1.15745532278223,0,1.03039244094078,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0,0.237270036248348,0.591026894253381,0,0.464810523557898,0.771626443924566,0.999242311751784,0,0.429742108096597,0.765153328275374,0.661774257358546,1.15933917810211
|short_description=p5@Ccdc92
}}
}}

Latest revision as of 22:00, 1 October 2015

Short description:p5@Ccdc92
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ccdc92_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -56bp_to_NM_144819, uc008zqr.1_5end
EntrezGene:Ccdc92
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ccdc92

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.24
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.88e-3954
nervous system8.77e-3975
central nervous system3.58e-3873
neural tube3.78e-3652
neural rod3.78e-3652
future spinal cord3.78e-3652
neural keel3.78e-3652
ectoderm-derived structure9.41e-3095
ectoderm9.41e-3095
presumptive ectoderm9.41e-3095
neurectoderm2.91e-2964
neural plate2.91e-2964
presumptive neural plate2.91e-2964
brain2.29e-2847
future brain2.29e-2847
regional part of brain6.27e-2746
gray matter5.57e-2634
ecto-epithelium1.97e-2473
anterior neural tube2.31e-2240
regional part of forebrain6.72e-2139
forebrain6.72e-2139
future forebrain6.72e-2139
brain grey matter1.06e-1829
regional part of telencephalon1.06e-1829
telencephalon1.06e-1829
pre-chordal neural plate1.90e-1849
structure with developmental contribution from neural crest2.32e-1792
occipital lobe6.72e-1510
visual cortex6.72e-1510
neocortex6.72e-1510
posterior neural tube1.13e-1412
chordal neural plate1.13e-1412
basal ganglion6.55e-138
nuclear complex of neuraxis6.55e-138
aggregate regional part of brain6.55e-138
collection of basal ganglia6.55e-138
cerebral subcortex6.55e-138
tube2.75e-11114
spinal cord3.37e-116
dorsal region element3.37e-116
dorsum3.37e-116
anatomical conduit6.03e-10122
regional part of cerebral cortex1.11e-0917
regional part of spinal cord2.34e-095
gray matter of spinal cord2.34e-095
cerebral cortex5.50e-0921
cerebral hemisphere5.50e-0921
pallium5.50e-0921
corpus striatum3.42e-085
striatum3.42e-085
ventral part of telencephalon3.42e-085
future corpus striatum3.42e-085
organ system subdivision4.08e-08194
regional part of midbrain5.09e-084
midbrain5.09e-084
presumptive midbrain5.09e-084
midbrain neural tube5.09e-084
raphe nuclei9.65e-073
reticular formation9.65e-073
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