FFCP PHASE1:Mm9::chr7:5008308..5008343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232821 | |EntrezGene=232821 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z4F1,Q3ULM0 | |UniProt=D3Z4F1,Q3ULM0 | ||
|association_with_transcript=0bp_to_ENSMUST00000144802,ENSMUST00000149912,NM_146178,uc009ezr.2,uc009ezs.2_5end | |association_with_transcript=0bp_to_ENSMUST00000144802,ENSMUST00000149912,NM_146178,uc009ezr.2,uc009ezs.2_5end | ||
|cluster_id=chr7:5008308..5008343,+ | |||
|description=CAGE_peak_1_at_Ccdc106_5end | |description=CAGE_peak_1_at_Ccdc106_5end | ||
|id=chr7:5008308..5008343,+ | |id=chr7:5008308..5008343,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.80e-14!23;CL:0000337!9.80e-14!23;CL:0000540!1.30e-10!33;CL:0000047!1.30e-10!33;CL:0000031!1.30e-10!33;CL:0000404!1.30e-10!33;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!1.87e-09!43;CL:0000393!2.75e-07!39;CL:0000211!2.75e-07!39 | |ontology_enrichment_celltype=CL:0000117!9.80e-14!23;CL:0000337!9.80e-14!23;CL:0000540!1.30e-10!33;CL:0000047!1.30e-10!33;CL:0000031!1.30e-10!33;CL:0000404!1.30e-10!33;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!1.87e-09!43;CL:0000393!2.75e-07!39;CL:0000211!2.75e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-16,23;CL:0000337,5.92e-16,23;CL:0000540,1.56e-09,33;CL:0000047,1.56e-09,33;CL:0000031,1.56e-09,33;CL:0000404,1.56e-09,33;CL:0000221,6.64e-08,44;CL:0000133,6.64e-08,44;CL:0002319,7.18e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.50e-28!73;UBERON:0005743!4.50e-28!73;UBERON:0000033!1.02e-26!63;UBERON:0001049!1.11e-26!52;UBERON:0005068!1.11e-26!52;UBERON:0006241!1.11e-26!52;UBERON:0007135!1.11e-26!52;UBERON:0002346!2.28e-26!71;UBERON:0003075!2.28e-26!71;UBERON:0007284!2.28e-26!71;UBERON:0000073!3.43e-26!75;UBERON:0001016!3.43e-26!75;UBERON:0000955!1.13e-25!50;UBERON:0006238!1.13e-25!50;UBERON:0004121!4.75e-25!102;UBERON:0000924!4.75e-25!102;UBERON:0006601!4.75e-25!102;UBERON:0002616!7.14e-25!49;UBERON:0003056!9.93e-23!49;UBERON:0003080!3.43e-21!40;UBERON:0002780!1.13e-20!39;UBERON:0001890!1.13e-20!39;UBERON:0006240!1.13e-20!39;UBERON:0002020!1.51e-19!34;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0000153!6.32e-14!94;UBERON:0007811!9.52e-12!86;UBERON:0000956!3.76e-11!21;UBERON:0001869!3.76e-11!21;UBERON:0000203!3.76e-11!21;UBERON:0002619!1.42e-09!17;UBERON:0000468!3.82e-08!333;UBERON:0002021!3.45e-07!10;UBERON:0000411!3.45e-07!10;UBERON:0001950!3.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-32,54;UBERON:0001049,1.53e-30,52;UBERON:0005068,1.53e-30,52;UBERON:0006241,1.53e-30,52;UBERON:0007135,1.53e-30,52;UBERON:0002346,3.37e-30,64;UBERON:0003075,3.37e-30,64;UBERON:0007284,3.37e-30,64;UBERON:0001017,9.43e-28,73;UBERON:0010371,1.22e-27,73;UBERON:0000955,6.14e-27,47;UBERON:0006238,6.14e-27,47;UBERON:0001016,2.93e-26,75;UBERON:0003056,4.16e-26,49;UBERON:0002616,5.18e-26,46;UBERON:0004121,2.86e-25,95;UBERON:0000924,2.86e-25,95;UBERON:0006601,2.86e-25,95;UBERON:0003080,8.88e-25,40;UBERON:0002780,3.65e-24,39;UBERON:0001890,3.65e-24,39;UBERON:0006240,3.65e-24,39;UBERON:0002020,7.85e-23,34;UBERON:0003528,5.67e-19,29;UBERON:0002791,5.67e-19,29;UBERON:0001893,5.67e-19,29;UBERON:0010314,2.47e-15,92;UBERON:0000956,6.72e-13,21;UBERON:0001869,6.72e-13,21;UBERON:0000203,6.72e-13,21;UBERON:0002619,4.91e-11,17;UBERON:0002021,3.21e-08,10;UBERON:0000411,3.21e-08,10;UBERON:0001950,3.21e-08,10;UBERON:0002420,2.39e-07,8;UBERON:0007245,2.39e-07,8;UBERON:0010009,2.39e-07,8;UBERON:0010011,2.39e-07,8;UBERON:0000454,2.39e-07,8 | |||
|phase1_expression=3.36312578920067,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0.782391344348039,2.61630187656536,3.73466510648602,1.55543919259427,0.979904951377538,0,0,0,0,0,0,0,6.67644320836673,10.0508286061686,6.33831403506179,1.0165335962074,0,0,0,0,0.898800331555214,5.37905627450176,2.38486108309499,4.18518408828241,2.73422449756797,9.42648248532552,7.73039893330647,3.06226998037385,2.39613677545591,4.5960939330501,7.70811166995721,7.2781782708557,5.68344173048101,7.51751840062105,5.58074625974699,13.5437476344758,5.862842979029,9.56696437053856,4.88954392885792,6.77645746589436,5.83723891276322,5.77838282058432,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.90833859442749,0.608930956624282,0.922461989024234,0.150722640552623,0.705532242814229,0.376999773989026,0,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,2.34224637609238,3.35114730901528,0,0,0,0,4.79330046095433,10.0650132620098,9.1727677042391,6.43149984711423,7.92717917724025,6.02585329222724,6.32740925964255,2.44414473240759,0.497627882440372,0.758168275301024,0.420883711772948,2.08192708740326,3.21862946206862,2.70093194708024,1.9591626318643,2.9255694635071,1.92170580427275,1.96773621575431,1.81092359517311,1.5089759505299,3.78212160335639,6.68614271823006,6.35667624039967,5.28289773528636,3.48252166522167,2.26360350048738,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,6.09840850835969,5.24813523134351,0,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,1.00841762311671,1.11189021922435,1.71203063501303,0,1.64698954724011,1.00534083520108,1.39269530428806,0.38992817423824,0,0.216138049874694,0.398282546508734,2.27601481143698,3.08470984046268,2.25415471346161,2.64746726198909,1.93952487167626,1.8936671370386,2.15004226222475,0.590440591918409,0.31399745568275,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,2.27389694124582,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0.551873492609465,3.21101179975584,4.45404409050372,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,10.2822821254978,0.99358059645788,5.69809931735217,3.4206261464251,1.31976098378028,0,0.242780636154981,1.51161778482376,0.565815239267694,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,5.44703369206061,2.70091641046965,3.49268446213437,3.42939256050548,1.77340233642274,5.17269571046005,2.30368628842969,5.78483403317739,0,0,0.441056796109924,0.49465875882444,1.61464426695906,1.38719727334758,1.43246812803764,0.328281799490123,0.874442509889552,2.78137953015765,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,3.02414954301044,2.09088296014469,3.05707589244649,1.88810084938749,2.0663363931334,0,1.03691978633434,1.24267862617385,1.69107881605257,1.19613236835183,1.48912641411388,1.75006069509643,1.80823752868824,2.19642963138012,1.5256441023948,1.0416350787516,0.943734099831398,1.20792060413003,0.288030006257865,0,1.21635129174099,0.718976700153791,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.503653849092235,0.386379188064381,0,2.74727436400898,0.857473516316263,0.501572104035363,3.3885110557024,5.9842280745933,9.16632821503035,10.3111909406213,8.22099023724771,5.2877572817279,6.07520250208625,8.55610286126019,3.62513927187364,6.73088405277366,1.14166082342594,3.99024873401031,4.95127456686989,3.16038732188782,3.35381060204772,1.83843508450014,1.33348036680969,1.64828045791115,1.60459604795908,2.77966932940177,1.01391719956096,0.943131706930381,1.87283014939765,1.6646539625266,2.1825478203133,3.81034953026459,2.66533949673168,1.54327376370964,2.06042950401653,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.74415699958794,1.88218760830661,2.28459441307527,1.28049581010941,1.05227884575137,1.7654534799962,2.80571135828869,1.77952527186261,1.97008964751127,2.04615521584845,1.39443157067369,1.73615949883027,1.74867404556562,2.8071793013449,0.859484216193193,1.14772999241306,0.441182838239031,0.231867835620421 | |phase1_expression=3.36312578920067,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0.782391344348039,2.61630187656536,3.73466510648602,1.55543919259427,0.979904951377538,0,0,0,0,0,0,0,6.67644320836673,10.0508286061686,6.33831403506179,1.0165335962074,0,0,0,0,0.898800331555214,5.37905627450176,2.38486108309499,4.18518408828241,2.73422449756797,9.42648248532552,7.73039893330647,3.06226998037385,2.39613677545591,4.5960939330501,7.70811166995721,7.2781782708557,5.68344173048101,7.51751840062105,5.58074625974699,13.5437476344758,5.862842979029,9.56696437053856,4.88954392885792,6.77645746589436,5.83723891276322,5.77838282058432,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,1.90833859442749,0.608930956624282,0.922461989024234,0.150722640552623,0.705532242814229,0.376999773989026,0,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,2.34224637609238,3.35114730901528,0,0,0,0,4.79330046095433,10.0650132620098,9.1727677042391,6.43149984711423,7.92717917724025,6.02585329222724,6.32740925964255,2.44414473240759,0.497627882440372,0.758168275301024,0.420883711772948,2.08192708740326,3.21862946206862,2.70093194708024,1.9591626318643,2.9255694635071,1.92170580427275,1.96773621575431,1.81092359517311,1.5089759505299,3.78212160335639,6.68614271823006,6.35667624039967,5.28289773528636,3.48252166522167,2.26360350048738,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,6.09840850835969,5.24813523134351,0,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,1.00841762311671,1.11189021922435,1.71203063501303,0,1.64698954724011,1.00534083520108,1.39269530428806,0.38992817423824,0,0.216138049874694,0.398282546508734,2.27601481143698,3.08470984046268,2.25415471346161,2.64746726198909,1.93952487167626,1.8936671370386,2.15004226222475,0.590440591918409,0.31399745568275,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,2.27389694124582,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0.551873492609465,3.21101179975584,4.45404409050372,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,10.2822821254978,0.99358059645788,5.69809931735217,3.4206261464251,1.31976098378028,0,0.242780636154981,1.51161778482376,0.565815239267694,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,5.44703369206061,2.70091641046965,3.49268446213437,3.42939256050548,1.77340233642274,5.17269571046005,2.30368628842969,5.78483403317739,0,0,0.441056796109924,0.49465875882444,1.61464426695906,1.38719727334758,1.43246812803764,0.328281799490123,0.874442509889552,2.78137953015765,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,3.02414954301044,2.09088296014469,3.05707589244649,1.88810084938749,2.0663363931334,0,1.03691978633434,1.24267862617385,1.69107881605257,1.19613236835183,1.48912641411388,1.75006069509643,1.80823752868824,2.19642963138012,1.5256441023948,1.0416350787516,0.943734099831398,1.20792060413003,0.288030006257865,0,1.21635129174099,0.718976700153791,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.503653849092235,0.386379188064381,0,2.74727436400898,0.857473516316263,0.501572104035363,3.3885110557024,5.9842280745933,9.16632821503035,10.3111909406213,8.22099023724771,5.2877572817279,6.07520250208625,8.55610286126019,3.62513927187364,6.73088405277366,1.14166082342594,3.99024873401031,4.95127456686989,3.16038732188782,3.35381060204772,1.83843508450014,1.33348036680969,1.64828045791115,1.60459604795908,2.77966932940177,1.01391719956096,0.943131706930381,1.87283014939765,1.6646539625266,2.1825478203133,3.81034953026459,2.66533949673168,1.54327376370964,2.06042950401653,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.74415699958794,1.88218760830661,2.28459441307527,1.28049581010941,1.05227884575137,1.7654534799962,2.80571135828869,1.77952527186261,1.97008964751127,2.04615521584845,1.39443157067369,1.73615949883027,1.74867404556562,2.8071793013449,0.859484216193193,1.14772999241306,0.441182838239031,0.231867835620421 | ||
|short_description=p1@Ccdc106 | |short_description=p1@Ccdc106 | ||
}} | }} |
Latest revision as of 18:17, 26 September 2015
Short description: | p1@Ccdc106 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc106_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000144802, ENSMUST00000149912, NM_146178, uc009ezr.2, uc009ezs.2_5end |
EntrezGene: | Ccdc106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.92e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.92e-16 | 23 |
neuron | 1.56e-09 | 33 |
neuronal stem cell | 1.56e-09 | 33 |
neuroblast | 1.56e-09 | 33 |
electrically signaling cell | 1.56e-09 | 33 |
ectodermal cell | 6.64e-08 | 44 |
neurectodermal cell | 6.64e-08 | 44 |
neural cell | 7.18e-08 | 43 |