FFCP PHASE1:Mm9::chr1:138156944..138157016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3233 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:138156944..138157016,- | |||
|description=CAGE_peak_at_chr1:138156944..138157016,- | |description=CAGE_peak_at_chr1:138156944..138157016,- | ||
|id=chr1:138156944..138157016,- | |id=chr1:138156944..138157016,- | ||
|ontology_enrichment_celltype=CL:0000117!1.20e-11!23;CL:0000337!1.20e-11!23;CL:0000540!3.00e-07!33;CL:0000047!3.00e-07!33;CL:0000031!3.00e-07!33;CL:0000404!3.00e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.20e-11!23;CL:0000337!1.20e-11!23;CL:0000540!3.00e-07!33;CL:0000047!3.00e-07!33;CL:0000031!3.00e-07!33;CL:0000404!3.00e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.38e-16,23;CL:0000337,3.38e-16,23;CL:0000540,5.28e-09,33;CL:0000047,5.28e-09,33;CL:0000031,5.28e-09,33;CL:0000404,5.28e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.67e-17!34;UBERON:0001049!1.46e-16!52;UBERON:0005068!1.46e-16!52;UBERON:0006241!1.46e-16!52;UBERON:0007135!1.46e-16!52;UBERON:0007811!3.80e-16!86;UBERON:0001017!1.20e-15!73;UBERON:0005743!1.20e-15!73;UBERON:0000153!4.11e-15!94;UBERON:0000955!4.77e-15!50;UBERON:0006238!4.77e-15!50;UBERON:0000073!6.59e-15!75;UBERON:0001016!6.59e-15!75;UBERON:0002616!1.70e-14!49;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0000033!5.92e-13!63;UBERON:0003080!1.23e-12!40;UBERON:0002780!4.14e-12!39;UBERON:0001890!4.14e-12!39;UBERON:0006240!4.14e-12!39;UBERON:0003056!3.74e-11!49;UBERON:0002346!1.85e-10!71;UBERON:0003075!1.85e-10!71;UBERON:0007284!1.85e-10!71;UBERON:0004121!9.05e-10!102;UBERON:0000924!9.05e-10!102;UBERON:0006601!9.05e-10!102;UBERON:0000956!1.23e-09!21;UBERON:0001869!1.23e-09!21;UBERON:0000203!1.23e-09!21;UBERON:0002021!2.77e-08!10;UBERON:0000411!2.77e-08!10;UBERON:0001950!2.77e-08!10;UBERON:0002619!3.80e-08!17;UBERON:0000064!4.63e-08!99 | |ontology_enrichment_uberon=UBERON:0002020!9.67e-17!34;UBERON:0001049!1.46e-16!52;UBERON:0005068!1.46e-16!52;UBERON:0006241!1.46e-16!52;UBERON:0007135!1.46e-16!52;UBERON:0007811!3.80e-16!86;UBERON:0001017!1.20e-15!73;UBERON:0005743!1.20e-15!73;UBERON:0000153!4.11e-15!94;UBERON:0000955!4.77e-15!50;UBERON:0006238!4.77e-15!50;UBERON:0000073!6.59e-15!75;UBERON:0001016!6.59e-15!75;UBERON:0002616!1.70e-14!49;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0000033!5.92e-13!63;UBERON:0003080!1.23e-12!40;UBERON:0002780!4.14e-12!39;UBERON:0001890!4.14e-12!39;UBERON:0006240!4.14e-12!39;UBERON:0003056!3.74e-11!49;UBERON:0002346!1.85e-10!71;UBERON:0003075!1.85e-10!71;UBERON:0007284!1.85e-10!71;UBERON:0004121!9.05e-10!102;UBERON:0000924!9.05e-10!102;UBERON:0006601!9.05e-10!102;UBERON:0000956!1.23e-09!21;UBERON:0001869!1.23e-09!21;UBERON:0000203!1.23e-09!21;UBERON:0002021!2.77e-08!10;UBERON:0000411!2.77e-08!10;UBERON:0001950!2.77e-08!10;UBERON:0002619!3.80e-08!17;UBERON:0000064!4.63e-08!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.41e-25,54;UBERON:0002020,1.39e-24,34;UBERON:0001049,2.28e-23,52;UBERON:0005068,2.28e-23,52;UBERON:0006241,2.28e-23,52;UBERON:0007135,2.28e-23,52;UBERON:0003528,5.85e-20,29;UBERON:0002791,5.85e-20,29;UBERON:0001893,5.85e-20,29;UBERON:0001017,8.64e-20,73;UBERON:0000955,4.98e-19,47;UBERON:0006238,4.98e-19,47;UBERON:0001016,8.24e-19,75;UBERON:0002616,3.01e-18,46;UBERON:0003080,6.71e-17,40;UBERON:0002346,3.39e-16,64;UBERON:0003075,3.39e-16,64;UBERON:0007284,3.39e-16,64;UBERON:0002780,3.82e-16,39;UBERON:0001890,3.82e-16,39;UBERON:0006240,3.82e-16,39;UBERON:0000956,3.51e-14,21;UBERON:0001869,3.51e-14,21;UBERON:0000203,3.51e-14,21;UBERON:0010371,1.80e-12,73;UBERON:0002619,5.00e-12,17;UBERON:0003056,8.59e-12,49;UBERON:0004121,1.84e-11,95;UBERON:0000924,1.84e-11,95;UBERON:0006601,1.84e-11,95;UBERON:0002021,2.54e-11,10;UBERON:0000411,2.54e-11,10;UBERON:0001950,2.54e-11,10;UBERON:0010314,2.87e-07,92;UBERON:0003076,3.94e-07,12;UBERON:0003057,3.94e-07,12;UBERON:0002420,5.73e-07,8;UBERON:0007245,5.73e-07,8;UBERON:0010009,5.73e-07,8;UBERON:0010011,5.73e-07,8;UBERON:0000454,5.73e-07,8 | |||
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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.0874204024189974,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,3.91199134694921,40.2128352363585,37.3515698468678,1.11994695955385,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,10.5798195854407,5.07065122804943,0,0,0,0,0,0.898800331555214,0.384218305321555,2.07379224616955,2.16009501330705,1.68259969081106,20.2812198926701,18.7738259808871,4.40966877173835,2.1086003624012,4.5960939330501,12.1127469099328,10.4703617229854,6.91229399653096,6.72620067423989,6.58711033937349,6.25096044668112,10.6089539620525,11.2552522006336,8.86229837105499,18.8562294703147,17.5117167382897,11.3703661953433,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.79928715803342,2.84831672011889,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0.220841518460394,0,0,14.6390398505774,5.44561437714983,0,0.958520996047362,0,0.127070227073065,12.4326230706003,17.8425235099264,14.5759048450923,21.5542157038423,21.4800984157478,10.389402227978,13.3037835715561,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.476255494059295,0.640568601424249,0.749613796477831,0.517406741478031,0,0.945530400839096,1.05570674498369,1.31517439456545,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.467061369468678,0,0.32833492815819,0,0.146199987425332,0,0.134206418760372,17.2437757822584,18.2141163911333,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0.335012514883631,0,0,0.472905432318573,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,7.06422595946285,8.90808818100744,0,0,0,0,0,0.716906393857656,0,0.566153061577665,0,0,0.395287777946524,12.8528526568723,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,5.10659408630682,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.938686832254841,0.63549621259146,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0,12.0526446306831,0.854354403989263,0.206386867963223,0,0.565105371014073,0.410082683163076,0.686334519619568,4.24946074984638,2.09927178485487,6.21899882119907,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,4.50954350947352,0,0.165458490457098,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0.724752362478018,1.72818003754719,13.2724670663835,13.582589424441,24.0343639765696,31.5707599836042,29.5394047851344,21.8549490259391,15.9859947861559,10.6336459565696,10.5005107946074,17.52756553065,9.67931377313669,12.5720666154281,10.5833025804362,10.5189211963412,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0,1.71494703263253,0,22.0253218620656,21.1749608793301,24.0616115644547,21.8253541576483,21.9226406326606,21.1510291269116,18.2256075062588,21.6154177547626,22.203978040226,18.6393712230655,0.103787347584177,0,1.19513524027894,0.486213434136588,2.93458427679175,1.65459157605013,1.33348036680969,1.03017528619447,1.28367683836726,2.52697211763797,2.02783439912192,1.13175804831646,1.31098110457835,1.72867911493147,1.7230640686684,1.42888107384922,2.20180219295225,1.15745532278223,2.06042950401653,1.32479028120958,1.71434626192708,1.59728225543404,0.715308569841963,1.88950341622027,0.658765662907314,2.11536519729191,1.46342378298218,0.789209134313529,1.62964936615034,3.36685362994643,1.89816028998679,1.18205378850676,1.63692417267876,2.78886314134739,2.12197272079256,3.74715866906919,1.16965804222704,1.50409737833809,1.53030665655075,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr1:138156944..138157016,- | |short_description=p@chr1:138156944..138157016,- | ||
}} | }} |
Latest revision as of 21:34, 4 August 2015
Short description: | p@chr1:138156944..138157016, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:138156944..138157016, - |
Coexpression cluster: | MCL_coexpression_mm9:3233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.38e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.38e-16 | 23 |
neuron | 5.28e-09 | 33 |
neuronal stem cell | 5.28e-09 | 33 |
neuroblast | 5.28e-09 | 33 |
electrically signaling cell | 5.28e-09 | 33 |