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FFCP PHASE1:Mm9::chrX:108009761..108009788,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18994
|EntrezGene=18994
|HGNC=
|HGNC=
|MCL_coexpression_id=1857
|TSSclassifier=NA
|UniProt=A6H6L6,P62515
|UniProt=A6H6L6,P62515
|association_with_transcript=-15bp_to_NM_008901,uc009ucv.1_5end
|association_with_transcript=-15bp_to_NM_008901,uc009ucv.1_5end
|cluster_id=chrX:108009761..108009788,+
|description=CAGE_peak_1_at_Pou3f4_5end
|description=CAGE_peak_1_at_Pou3f4_5end
|id=chrX:108009761..108009788,+
|id=chrX:108009761..108009788,+
|ontology_enrichment_celltype=CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0002319!7.51e-21!43;CL:0000540!9.36e-18!33;CL:0000047!9.36e-18!33;CL:0000031!9.36e-18!33;CL:0000404!9.36e-18!33;CL:0000117!2.26e-16!23;CL:0000337!2.26e-16!23;CL:0000055!4.40e-15!50;CL:0000393!1.49e-12!39;CL:0000211!1.49e-12!39;CL:0002321!6.81e-07!70;CL:0000220!6.81e-07!70
|ontology_enrichment_celltype=CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0002319!7.51e-21!43;CL:0000540!9.36e-18!33;CL:0000047!9.36e-18!33;CL:0000031!9.36e-18!33;CL:0000404!9.36e-18!33;CL:0000117!2.26e-16!23;CL:0000337!2.26e-16!23;CL:0000055!4.40e-15!50;CL:0000393!1.49e-12!39;CL:0000211!1.49e-12!39;CL:0002321!6.81e-07!70;CL:0000220!6.81e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000221,1.12e-22,44;CL:0000133,1.12e-22,44;CL:0002319,4.10e-22,43;CL:0000117,7.82e-20,23;CL:0000337,7.82e-20,23;CL:0000540,1.60e-19,33;CL:0000047,1.60e-19,33;CL:0000031,1.60e-19,33;CL:0000404,1.60e-19,33;CL:0000393,1.20e-14,39;CL:0000211,1.20e-14,39;CL:0002321,6.09e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.57e-38!73;UBERON:0005743!1.57e-38!73;UBERON:0000073!4.14e-38!75;UBERON:0001016!4.14e-38!75;UBERON:0004121!1.56e-29!102;UBERON:0000924!1.56e-29!102;UBERON:0006601!1.56e-29!102;UBERON:0001049!2.24e-27!52;UBERON:0005068!2.24e-27!52;UBERON:0006241!2.24e-27!52;UBERON:0007135!2.24e-27!52;UBERON:0000955!1.52e-26!50;UBERON:0006238!1.52e-26!50;UBERON:0002616!9.00e-26!49;UBERON:0000033!4.71e-25!63;UBERON:0002346!3.00e-22!71;UBERON:0003075!3.00e-22!71;UBERON:0007284!3.00e-22!71;UBERON:0003080!1.35e-21!40;UBERON:0002780!6.58e-21!39;UBERON:0001890!6.58e-21!39;UBERON:0006240!6.58e-21!39;UBERON:0003056!1.26e-19!49;UBERON:0002020!9.53e-19!34;UBERON:0002791!8.02e-16!29;UBERON:0003528!8.02e-16!29;UBERON:0001893!8.02e-16!29;UBERON:0007811!1.07e-12!86;UBERON:0000153!3.33e-12!94;UBERON:0000956!2.30e-10!21;UBERON:0001869!2.30e-10!21;UBERON:0000203!2.30e-10!21;UBERON:0002619!2.83e-08!17;UBERON:0002420!7.10e-07!8;UBERON:0007245!7.10e-07!8;UBERON:0010009!7.10e-07!8;UBERON:0010011!7.10e-07!8;UBERON:0000454!7.10e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-45,73;UBERON:0001016,4.33e-43,75;UBERON:0000073,1.96e-35,54;UBERON:0001049,1.97e-33,52;UBERON:0005068,1.97e-33,52;UBERON:0006241,1.97e-33,52;UBERON:0007135,1.97e-33,52;UBERON:0000955,9.01e-30,47;UBERON:0006238,9.01e-30,47;UBERON:0004121,1.30e-29,95;UBERON:0000924,1.30e-29,95;UBERON:0006601,1.30e-29,95;UBERON:0002616,7.77e-29,46;UBERON:0002346,2.06e-26,64;UBERON:0003075,2.06e-26,64;UBERON:0007284,2.06e-26,64;UBERON:0003080,2.76e-26,40;UBERON:0002780,1.95e-25,39;UBERON:0001890,1.95e-25,39;UBERON:0006240,1.95e-25,39;UBERON:0010371,2.67e-23,73;UBERON:0002020,9.13e-23,34;UBERON:0003528,3.74e-19,29;UBERON:0002791,3.74e-19,29;UBERON:0001893,3.74e-19,29;UBERON:0003056,1.41e-18,49;UBERON:0010314,2.40e-14,92;UBERON:0000956,2.03e-12,21;UBERON:0001869,2.03e-12,21;UBERON:0000203,2.03e-12,21;UBERON:0002619,7.63e-10,17;UBERON:0002420,4.02e-08,8;UBERON:0007245,4.02e-08,8;UBERON:0010009,4.02e-08,8;UBERON:0010011,4.02e-08,8;UBERON:0000454,4.02e-08,8;UBERON:0003076,1.88e-07,12;UBERON:0003057,1.88e-07,12;UBERON:0001894,4.00e-07,10;UBERON:0006222,4.00e-07,10
|phase1_expression=245.348033764544,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.99584223859941,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,15.4797861030117,3.07560655828261,1.74986909166855,10.7789544651529,23.0004102983955,0,0,0,0,0,0,77.2848880483664,96.27635822751,74.158274210223,2.37191172448392,1.77858959222228,0,0,0,10.4860038681442,12.6792040756113,9.12468588314603,13.095576018174,10.5162480675691,7.9982275633065,12.1477697523387,64.1851787886359,71.0214940245131,66.1837526359215,19.82085857989,11.6195477657521,15.2070467923681,48.0066087337906,44.1885318599639,37.5057626800867,13.959149950069,12.9435400307286,11.1542720877071,10.3120004915784,11.9592211871246,13.9799584368975,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.323533699894818,0,0,0,3.22058876712702,1.25668024088073,0,0,0,0,14.5296920222678,40.7175536508578,33.9266750704734,8.34356736922927,5.37002460393694,14.1295870300501,16.061885043708,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,4.20579897128254,3.2929475961371,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,1.11189021922435,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.70642831941401,5.50894926983355,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.67358408898873,0.849229592366497,2.02405350837447,2.63030272120181,0.790575555893047,21.5285282002611,0,0,0.162886959353576,0.164970122972535,0,11.4106898992841,5.44182402536552,3.20628635585027,5.31543407185391,2.15204603560749,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.36175842301515,19.2665370613502,39.1956811861746,21.8623775732224,15.2512600932355,5.70780216326626,3.29098041204242,2.13125464380219,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0,0.328281799490123,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,1.82987520414164,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,9.73922372846974,5.32744865265431,5.48066015816514,3.7769694869485,3.37511250115903,7.20513925158753,6.79713613476307,11.39072685854,22.5218544257663,23.5424675306608,10.4147499510022,6.56388136084394,9.22297915563122,4.22840069435032,4.4449345560323,3.91466608753899,3.53011130550997,3.03236654116557,4.05566879824384,5.65879024158229,3.27745276144588,4.28968521112624,3.27382173046996,3.81034953026459,3.70829843023538,3.6652751888104,1.64834360321323,4.71036544430071,3.77156177623957,4.2594193478241,4.29185141905178,5.37781741539616,3.85848459702856,3.04612588410035,3.65855945745545,3.15683653725411,4.34573164306758,2.80571135828869,3.32178050747688,2.85662998889134,2.45538625901814,2.16911577660352,4.82266527452853,12.9901500527732,3.04111090979031,6.01638951335235,0.765153328275374,0,0
|phase1_expression=245.348033764544,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.99584223859941,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,15.4797861030117,3.07560655828261,1.74986909166855,10.7789544651529,23.0004102983955,0,0,0,0,0,0,77.2848880483664,96.27635822751,74.158274210223,2.37191172448392,1.77858959222228,0,0,0,10.4860038681442,12.6792040756113,9.12468588314603,13.095576018174,10.5162480675691,7.9982275633065,12.1477697523387,64.1851787886359,71.0214940245131,66.1837526359215,19.82085857989,11.6195477657521,15.2070467923681,48.0066087337906,44.1885318599639,37.5057626800867,13.959149950069,12.9435400307286,11.1542720877071,10.3120004915784,11.9592211871246,13.9799584368975,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.323533699894818,0,0,0,3.22058876712702,1.25668024088073,0,0,0,0,14.5296920222678,40.7175536508578,33.9266750704734,8.34356736922927,5.37002460393694,14.1295870300501,16.061885043708,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,4.20579897128254,3.2929475961371,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,1.11189021922435,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.70642831941401,5.50894926983355,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.67358408898873,0.849229592366497,2.02405350837447,2.63030272120181,0.790575555893047,21.5285282002611,0,0,0.162886959353576,0.164970122972535,0,11.4106898992841,5.44182402536552,3.20628635585027,5.31543407185391,2.15204603560749,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.36175842301515,19.2665370613502,39.1956811861746,21.8623775732224,15.2512600932355,5.70780216326626,3.29098041204242,2.13125464380219,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0,0.328281799490123,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,1.82987520414164,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,9.73922372846974,5.32744865265431,5.48066015816514,3.7769694869485,3.37511250115903,7.20513925158753,6.79713613476307,11.39072685854,22.5218544257663,23.5424675306608,10.4147499510022,6.56388136084394,9.22297915563122,4.22840069435032,4.4449345560323,3.91466608753899,3.53011130550997,3.03236654116557,4.05566879824384,5.65879024158229,3.27745276144588,4.28968521112624,3.27382173046996,3.81034953026459,3.70829843023538,3.6652751888104,1.64834360321323,4.71036544430071,3.77156177623957,4.2594193478241,4.29185141905178,5.37781741539616,3.85848459702856,3.04612588410035,3.65855945745545,3.15683653725411,4.34573164306758,2.80571135828869,3.32178050747688,2.85662998889134,2.45538625901814,2.16911577660352,4.82266527452853,12.9901500527732,3.04111090979031,6.01638951335235,0.765153328275374,0,0
|short_description=p1@Pou3f4
|short_description=p1@Pou3f4
}}
}}

Latest revision as of 13:06, 1 October 2015

Short description:p1@Pou3f4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pou3f4_5end
Coexpression cluster:MCL_coexpression_mm9:1857
Association with transcript: -15bp_to_NM_008901, uc009ucv.1_5end
EntrezGene:Pou3f4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pou3f4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7245.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C377.28
Mouse Granule cells, donor2.CNhs12357.11731-123E396.28
Mouse Granule cells, donor3.CNhs12108.11636-122C774.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D264.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F271.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D666.18
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D448.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F444.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D837.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D840.72
corpus striatum, neonate N00.CNhs11226.630-43F133.93
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B216.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E619.27
pituitary gland, embryo E13.CNhs11009.370-44C739.20
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I822.52
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H210.41
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.12e-2244
neurectodermal cell1.12e-2244
neural cell4.10e-2243
CNS neuron (sensu Vertebrata)7.82e-2023
neuroblast (sensu Vertebrata)7.82e-2023
neuron1.60e-1933
neuronal stem cell1.60e-1933
neuroblast1.60e-1933
electrically signaling cell1.60e-1933
electrically responsive cell1.20e-1439
electrically active cell1.20e-1439
embryonic cell6.09e-0970

Uber anatomy
Ontology termp-valuen
central nervous system5.11e-4573
nervous system4.33e-4375
regional part of nervous system1.96e-3554
neural tube1.97e-3352
neural rod1.97e-3352
future spinal cord1.97e-3352
neural keel1.97e-3352
brain9.01e-3047
future brain9.01e-3047
ectoderm-derived structure1.30e-2995
ectoderm1.30e-2995
presumptive ectoderm1.30e-2995
regional part of brain7.77e-2946
neurectoderm2.06e-2664
neural plate2.06e-2664
presumptive neural plate2.06e-2664
anterior neural tube2.76e-2640
regional part of forebrain1.95e-2539
forebrain1.95e-2539
future forebrain1.95e-2539
ecto-epithelium2.67e-2373
gray matter9.13e-2334
brain grey matter3.74e-1929
regional part of telencephalon3.74e-1929
telencephalon3.74e-1929
pre-chordal neural plate1.41e-1849
structure with developmental contribution from neural crest2.40e-1492
cerebral cortex2.03e-1221
cerebral hemisphere2.03e-1221
pallium2.03e-1221
regional part of cerebral cortex7.63e-1017
basal ganglion4.02e-088
nuclear complex of neuraxis4.02e-088
aggregate regional part of brain4.02e-088
collection of basal ganglia4.02e-088
cerebral subcortex4.02e-088
posterior neural tube1.88e-0712
chordal neural plate1.88e-0712
diencephalon4.00e-0710
future diencephalon4.00e-0710
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