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FFCP PHASE1:Mm9::chr4:83132145..83132180,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=101739
|EntrezGene=101739
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=A2BI12
|UniProt=A2BI12
|association_with_transcript=-41bp_to_uc008tla.1_5end
|association_with_transcript=-41bp_to_uc008tla.1_5end
|cluster_id=chr4:83132145..83132180,-
|description=CAGE_peak_8_at_Psip1_5end
|description=CAGE_peak_8_at_Psip1_5end
|id=chr4:83132145..83132180,-
|id=chr4:83132145..83132180,-
|ontology_enrichment_celltype=CL:0000117!2.35e-07!23;CL:0000337!2.35e-07!23
|ontology_enrichment_celltype=CL:0000117!2.35e-07!23;CL:0000337!2.35e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-09,23;CL:0000337,5.31e-09,23;CL:0002610,1.17e-08,3;CL:0002614,6.41e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.37e-18!63;UBERON:0002346!5.64e-15!71;UBERON:0003075!5.64e-15!71;UBERON:0007284!5.64e-15!71;UBERON:0001017!1.27e-14!73;UBERON:0005743!1.27e-14!73;UBERON:0004121!4.00e-14!102;UBERON:0000924!4.00e-14!102;UBERON:0006601!4.00e-14!102;UBERON:0007811!4.03e-14!86;UBERON:0001049!4.28e-14!52;UBERON:0005068!4.28e-14!52;UBERON:0006241!4.28e-14!52;UBERON:0007135!4.28e-14!52;UBERON:0000073!6.47e-14!75;UBERON:0001016!6.47e-14!75;UBERON:0003056!1.11e-13!49;UBERON:0000955!1.95e-13!50;UBERON:0006238!1.95e-13!50;UBERON:0002616!3.03e-13!49;UBERON:0000153!5.84e-13!94;UBERON:0002020!1.59e-10!34;UBERON:0003080!1.30e-09!40;UBERON:0002780!4.32e-09!39;UBERON:0001890!4.32e-09!39;UBERON:0006240!4.32e-09!39;UBERON:0002791!2.17e-08!29;UBERON:0003528!2.17e-08!29;UBERON:0001893!2.17e-08!29;UBERON:0002021!1.74e-07!10;UBERON:0000411!1.74e-07!10;UBERON:0001950!1.74e-07!10
|ontology_enrichment_uberon=UBERON:0000033!4.37e-18!63;UBERON:0002346!5.64e-15!71;UBERON:0003075!5.64e-15!71;UBERON:0007284!5.64e-15!71;UBERON:0001017!1.27e-14!73;UBERON:0005743!1.27e-14!73;UBERON:0004121!4.00e-14!102;UBERON:0000924!4.00e-14!102;UBERON:0006601!4.00e-14!102;UBERON:0007811!4.03e-14!86;UBERON:0001049!4.28e-14!52;UBERON:0005068!4.28e-14!52;UBERON:0006241!4.28e-14!52;UBERON:0007135!4.28e-14!52;UBERON:0000073!6.47e-14!75;UBERON:0001016!6.47e-14!75;UBERON:0003056!1.11e-13!49;UBERON:0000955!1.95e-13!50;UBERON:0006238!1.95e-13!50;UBERON:0002616!3.03e-13!49;UBERON:0000153!5.84e-13!94;UBERON:0002020!1.59e-10!34;UBERON:0003080!1.30e-09!40;UBERON:0002780!4.32e-09!39;UBERON:0001890!4.32e-09!39;UBERON:0006240!4.32e-09!39;UBERON:0002791!2.17e-08!29;UBERON:0003528!2.17e-08!29;UBERON:0001893!2.17e-08!29;UBERON:0002021!1.74e-07!10;UBERON:0000411!1.74e-07!10;UBERON:0001950!1.74e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.77e-22,54;UBERON:0002346,3.02e-20,64;UBERON:0003075,3.02e-20,64;UBERON:0007284,3.02e-20,64;UBERON:0001017,2.67e-19,73;UBERON:0004121,9.68e-19,95;UBERON:0000924,9.68e-19,95;UBERON:0006601,9.68e-19,95;UBERON:0001016,1.27e-18,75;UBERON:0001049,2.89e-18,52;UBERON:0005068,2.89e-18,52;UBERON:0006241,2.89e-18,52;UBERON:0007135,2.89e-18,52;UBERON:0010371,5.00e-17,73;UBERON:0002616,1.54e-15,46;UBERON:0000955,4.09e-15,47;UBERON:0006238,4.09e-15,47;UBERON:0003056,8.84e-14,49;UBERON:0010314,2.64e-12,92;UBERON:0002021,5.17e-12,10;UBERON:0000411,5.17e-12,10;UBERON:0001950,5.17e-12,10;UBERON:0002020,1.48e-11,34;UBERON:0003080,7.79e-11,40;UBERON:0003528,2.96e-10,29;UBERON:0002791,2.96e-10,29;UBERON:0001893,2.96e-10,29;UBERON:0002950,7.01e-10,4;UBERON:0001891,7.01e-10,4;UBERON:0009616,7.01e-10,4;UBERON:0010286,7.01e-10,4;UBERON:0002780,1.14e-09,39;UBERON:0001890,1.14e-09,39;UBERON:0006240,1.14e-09,39;UBERON:0003076,4.36e-09,12;UBERON:0003057,4.36e-09,12;UBERON:0004684,1.17e-08,3;UBERON:0002275,1.17e-08,3;UBERON:0000956,1.75e-08,21;UBERON:0001869,1.75e-08,21;UBERON:0000203,1.75e-08,21;UBERON:0002619,1.86e-08,17;UBERON:0002038,6.41e-08,3;UBERON:0009663,6.41e-08,3;UBERON:0009661,6.41e-08,3;UBERON:0000125,6.41e-08,3;UBERON:0002308,6.41e-08,3;UBERON:0004733,4.99e-07,6;UBERON:0004732,4.99e-07,6;UBERON:0002028,4.99e-07,6;UBERON:0007277,4.99e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0,0,0.47997726838022,0,0,0.430761996159075,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,0.809265843438391,1.5869729378161,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0,0.405017814995072,0,0.285650984403804,0.662605622854841,0.367472397644862,0,0,2.20231761998777,2.80912143787413,3.22573719838111,0.527545150920775,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,1.22238598221448,1.47314292736834,1.70846016958924,0.745597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,3.56059401582874,0,0.11981512450592,0,0,1.49790639404823,0.915001205637253,0.251308704225729,4.17178368461463,1.53429274398198,1.87009240103604,1.46017136760982,0.407357455401265,0,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,1.26043490863744,0.452114453507145,1.90502197623718,1.2811372028485,1.03071897015702,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0,1.47202963994889,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0.295220295959204,0,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,1.99259867206745,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.493647061806363,0,0.704015124191131,0.42366414172764,0.441056796109924,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,9.01908701894705,0.747582730219894,0,0.583353565032143,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,3.14059357073808,7.20075015644664,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0.501572104035363,2.25900737046827,2.76195141904306,2.86447756719698,2.23409137046794,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,2.71885445390523,2.5888015587591,0.31136204275253,0.399024873401031,0.170733605754134,0,0.209613162627982,0.735374033800057,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.128050304809739,0.574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,1.12228454331548,0.355905054372522,0.0985044823755635,0,0,0.578719832943424,0.499621155875892,0,0,0,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0,0,0.47997726838022,0,0,0.430761996159075,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,0.809265843438391,1.5869729378161,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0,0.405017814995072,0,0.285650984403804,0.662605622854841,0.367472397644862,0,0,2.20231761998777,2.80912143787413,3.22573719838111,0.527545150920775,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,1.22238598221448,1.47314292736834,1.70846016958924,0.745597783301202,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,3.56059401582874,0,0.11981512450592,0,0,1.49790639404823,0.915001205637253,0.251308704225729,4.17178368461463,1.53429274398198,1.87009240103604,1.46017136760982,0.407357455401265,0,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,1.26043490863744,0.452114453507145,1.90502197623718,1.2811372028485,1.03071897015702,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0,1.47202963994889,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0.295220295959204,0,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,1.99259867206745,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.493647061806363,0,0.704015124191131,0.42366414172764,0.441056796109924,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,9.01908701894705,0.747582730219894,0,0.583353565032143,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,3.14059357073808,7.20075015644664,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0.501572104035363,2.25900737046827,2.76195141904306,2.86447756719698,2.23409137046794,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,2.71885445390523,2.5888015587591,0.31136204275253,0.399024873401031,0.170733605754134,0,0.209613162627982,0.735374033800057,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.128050304809739,0.574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,1.12228454331548,0.355905054372522,0.0985044823755635,0,0,0.578719832943424,0.499621155875892,0,0,0,0,0
|short_description=p8@Psip1
|short_description=p8@Psip1
}}
}}

Latest revision as of 06:04, 27 September 2015

Short description:p8@Psip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Psip1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -41bp_to_uc008tla.1_5end
EntrezGene:Psip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Psip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.31e-0923
neuroblast (sensu Vertebrata)5.31e-0923
raphe nuclei neuron1.17e-083
neuron of the substantia nigra6.41e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.77e-2254
neurectoderm3.02e-2064
neural plate3.02e-2064
presumptive neural plate3.02e-2064
central nervous system2.67e-1973
ectoderm-derived structure9.68e-1995
ectoderm9.68e-1995
presumptive ectoderm9.68e-1995
nervous system1.27e-1875
neural tube2.89e-1852
neural rod2.89e-1852
future spinal cord2.89e-1852
neural keel2.89e-1852
ecto-epithelium5.00e-1773
regional part of brain1.54e-1546
brain4.09e-1547
future brain4.09e-1547
pre-chordal neural plate8.84e-1449
structure with developmental contribution from neural crest2.64e-1292
occipital lobe5.17e-1210
visual cortex5.17e-1210
neocortex5.17e-1210
gray matter1.48e-1134
anterior neural tube7.79e-1140
brain grey matter2.96e-1029
regional part of telencephalon2.96e-1029
telencephalon2.96e-1029
regional part of midbrain7.01e-104
midbrain7.01e-104
presumptive midbrain7.01e-104
midbrain neural tube7.01e-104
regional part of forebrain1.14e-0939
forebrain1.14e-0939
future forebrain1.14e-0939
posterior neural tube4.36e-0912
chordal neural plate4.36e-0912
raphe nuclei1.17e-083
reticular formation1.17e-083
cerebral cortex1.75e-0821
cerebral hemisphere1.75e-0821
pallium1.75e-0821
regional part of cerebral cortex1.86e-0817
substantia nigra6.41e-083
telencephalic nucleus6.41e-083
midbrain nucleus6.41e-083
neural nucleus6.41e-083
nucleus of brain6.41e-083
segmental subdivision of hindbrain4.99e-076
segmental subdivision of nervous system4.99e-076
hindbrain4.99e-076
presumptive hindbrain4.99e-076
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