FFCP PHASE1:Hg19::chr14:60097524..60097538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3B9,Q16799 | |UniProt=A8K3B9,Q16799 | ||
|association_with_transcript=0bp_to_ENST00000342503,NM_206852_5end | |association_with_transcript=0bp_to_ENST00000342503,NM_206852_5end | ||
|cluster_id=chr14:60097524..60097538,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_RTN1_5end | |description=CAGE_peak_3_at_RTN1_5end | ||
|id=chr14:60097524..60097538,- | |id=chr14:60097524..60097538,- | ||
|ontology_enrichment_celltype=CL:0002319!4.28e-10!25;CL:0000047!5.14e-07!8 | |ontology_enrichment_celltype=CL:0002319!4.28e-10!25;CL:0000047!5.14e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.89e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.02e-11,25;CL:0000047,1.10e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.65e-23;82!UBERON:0006215;2.51e-08;3!UBERON:0006241;4.25e-07;3!UBERON:0003057;4.25e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;8.57e-65;32!UBERON:0001893;2.58e-64;34!UBERON:0003528;2.98e-64;34!UBERON:0002020;2.98e-64;34!UBERON:0002791;3.42e-64;32!UBERON:0002780;5.38e-60;41!UBERON:0001890;5.38e-60;41!UBERON:0000956;2.09e-57;25!UBERON:0000203;2.09e-57;25!UBERON:0000073;3.20e-57;53!UBERON:0002616;3.20e-57;53!UBERON:0002619;2.94e-52;22!UBERON:0001950;3.16e-48;20!UBERON:0000955;7.12e-42;68!UBERON:0001017;7.36e-41;75!UBERON:0001016;5.36e-38;83!UBERON:0004732;1.98e-19;13!UBERON:0002420;7.62e-19;9!UBERON:0007245;7.62e-19;9!UBERON:0010009;7.62e-19;9!UBERON:0010011;7.62e-19;9!UBERON:0000454;7.62e-19;9!UBERON:0000125;1.72e-18;9!UBERON:0002308;1.72e-18;9!UBERON:0004733;1.54e-17;12!UBERON:0002028;1.54e-17;12!UBERON:0001871;9.49e-17;6!UBERON:0000200;6.34e-15;6!UBERON:0009663;1.63e-14;7!UBERON:0011216;2.48e-14;132!UBERON:0007023;2.23e-13;114!UBERON:0002298;2.53e-13;6!UBERON:0002021;7.19e-13;5!UBERON:0001872;8.50e-13;5!UBERON:0000349;3.88e-12;5!UBERON:0002680;4.33e-12;9!UBERON:0001895;4.33e-12;9!UBERON:0001894;1.80e-10;7!UBERON:0000369;1.23e-09;4!UBERON:0002435;1.23e-09;4!UBERON:0000204;1.23e-09;4!UBERON:0001870;2.45e-08;3!UBERON:0010314;7.22e-08;132!UBERON:0000988;1.09e-07;3!UBERON:0005383;1.78e-07;3!UBERON:0005382;1.78e-07;3!UBERON:0001896;2.67e-07;3!UBERON:0005290;2.67e-07;3!UBERON:0002240;4.25e-07;3!UBERON:0005174;4.25e-07;3!UBERON:0001137;4.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.43e-107,56;UBERON:0005068,7.43e-107,56;UBERON:0006241,7.43e-107,56;UBERON:0007135,7.43e-107,56;UBERON:0001016,9.01e-107,89;UBERON:0001017,2.62e-105,81;UBERON:0000073,7.29e-101,53;UBERON:0002616,7.29e-101,53;UBERON:0000955,9.25e-92,68;UBERON:0006238,9.25e-92,68;UBERON:0002780,6.76e-84,41;UBERON:0001890,6.76e-84,41;UBERON:0003080,6.76e-84,41;UBERON:0006240,6.76e-84,41;UBERON:0003075,5.47e-77,82;UBERON:0007284,5.47e-77,82;UBERON:0001893,6.12e-75,34;UBERON:0003528,6.88e-75,34;UBERON:0002020,6.88e-75,34;UBERON:0002346,1.04e-72,86;UBERON:0001869,2.30e-71,32;UBERON:0002791,1.03e-70,32;UBERON:0010371,4.64e-62,104;UBERON:0003056,1.95e-58,61;UBERON:0000956,2.30e-57,25;UBERON:0000203,2.30e-57,25;UBERON:0004121,1.03e-54,171;UBERON:0000924,1.03e-54,171;UBERON:0006601,1.03e-54,171;UBERON:0002619,2.98e-52,22;UBERON:0001950,3.21e-48,20;UBERON:0011216,1.70e-46,223;UBERON:0010314,5.83e-44,132;UBERON:0007023,5.68e-42,114;UBERON:0000025,1.74e-26,192;UBERON:0003076,6.18e-23,15;UBERON:0003057,6.18e-23,15;UBERON:0004732,1.93e-19,13;UBERON:0002420,7.22e-19,9;UBERON:0007245,7.22e-19,9;UBERON:0010009,7.22e-19,9;UBERON:0010011,7.22e-19,9;UBERON:0000454,7.22e-19,9;UBERON:0000125,1.66e-18,9;UBERON:0002308,1.66e-18,9;UBERON:0004111,4.07e-18,240;UBERON:0004733,1.47e-17,12;UBERON:0002028,1.47e-17,12;UBERON:0007277,1.47e-17,12;UBERON:0001871,9.61e-17,6;UBERON:0000200,6.58e-15,6;UBERON:0009663,1.54e-14,7;UBERON:0000483,1.91e-14,306;UBERON:0000119,3.76e-14,309;UBERON:0002298,2.62e-13,6;UBERON:0002021,7.02e-13,5;UBERON:0001872,8.51e-13,5;UBERON:0000349,3.93e-12,5;UBERON:0002680,4.11e-12,9;UBERON:0001895,4.11e-12,9;UBERON:0010092,4.11e-12,9;UBERON:0000923,3.75e-11,560;UBERON:0010316,3.75e-11,560;UBERON:0005291,3.75e-11,560;UBERON:0006598,3.75e-11,560;UBERON:0010317,3.75e-11,560;UBERON:0002532,3.75e-11,560;UBERON:0002050,6.23e-11,564;UBERON:0001894,1.71e-10,7;UBERON:0006222,1.71e-10,7;UBERON:0000922,4.40e-10,592;UBERON:0005423,4.99e-10,581;UBERON:0000369,1.23e-09,4;UBERON:0002435,1.23e-09,4;UBERON:0000204,1.23e-09,4;UBERON:0010082,1.23e-09,4;UBERON:0001870,2.48e-08,3;UBERON:0000988,1.12e-07,3;UBERON:0005383,1.76e-07,3;UBERON:0005382,1.76e-07,3;UBERON:0001896,2.70e-07,3;UBERON:0005290,2.70e-07,3;UBERON:0010096,2.70e-07,3;UBERON:0002240,4.11e-07,3;UBERON:0005174,4.11e-07,3;UBERON:0001137,4.11e-07,3 | |||
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|short_description=p3@RTN1 | |short_description=p3@RTN1 | ||
}} | }} |
Latest revision as of 19:56, 24 September 2015
Short description: | p3@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RTN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000342503, NM_206852_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | A8K3B9Q16799 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.02e-11 | 25 |
neuronal stem cell | 1.10e-07 | 8 |