FFCP PHASE1:Hg19::chr13:31191506..31191517,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3146 | |EntrezGene=3146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4983 | |HGNC=4983 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001usz.2_5end | |association_with_transcript=0bp_to_uc001usz.2_5end | ||
|cluster_id=chr13:31191506..31191517,- | |||
|description=CAGE_peak_19_at_HMGB1_5end | |description=CAGE_peak_19_at_HMGB1_5end | ||
|id=chr13:31191506..31191517,- | |id=chr13:31191506..31191517,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.74e-17;82!UBERON:0010122;1.68e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.54e-35!57;UBERON:0005068!2.54e-35!57;UBERON:0006241!2.54e-35!57;UBERON:0007135!2.54e-35!57;UBERON:0007023!2.88e-33!115;UBERON:0003075!1.29e-32!86;UBERON:0007284!1.29e-32!86;UBERON:0001017!1.35e-32!82;UBERON:0002616!2.94e-32!59;UBERON:0005743!5.07e-32!86;UBERON:0000955!4.92e-31!69;UBERON:0006238!4.92e-31!69;UBERON:0002346!6.18e-31!90;UBERON:0000073!9.07e-31!94;UBERON:0001016!9.07e-31!94;UBERON:0002780!5.06e-28!41;UBERON:0001890!5.06e-28!41;UBERON:0006240!5.06e-28!41;UBERON:0003080!6.26e-27!42;UBERON:0001893!2.94e-24!34;UBERON:0002020!3.37e-24!34;UBERON:0003528!3.37e-24!34;UBERON:0004121!6.90e-24!169;UBERON:0002791!2.33e-23!33;UBERON:0000153!2.67e-23!129;UBERON:0007811!2.67e-23!129;UBERON:0000924!3.40e-23!173;UBERON:0006601!3.40e-23!173;UBERON:0000033!3.42e-23!123;UBERON:0001869!1.14e-22!32;UBERON:0003056!3.75e-22!61;UBERON:0000956!7.18e-17!25;UBERON:0000203!7.18e-17!25;UBERON:0002619!1.19e-15!22;UBERON:0001950!3.12e-14!20;UBERON:0000475!1.33e-11!365;UBERON:0000064!3.57e-11!219;UBERON:0000477!1.35e-09!286;UBERON:0000119!1.52e-09!312;UBERON:0000483!1.92e-09!309;UBERON:0003076!2.04e-09!15;UBERON:0003057!2.04e-09!15;UBERON:0004111!3.81e-09!241;UBERON:0000025!4.02e-09!194;UBERON:0002308!6.88e-09!9;UBERON:0000125!6.88e-09!9;UBERON:0002420!1.05e-08!9;UBERON:0007245!1.05e-08!9;UBERON:0010009!1.05e-08!9;UBERON:0010011!1.05e-08!9;UBERON:0000454!1.05e-08!9;UBERON:0004732!4.98e-08!13;UBERON:0000481!7.27e-08!347;UBERON:0009663!2.70e-07!7;UBERON:0004733!3.07e-07!12;UBERON:0002028!3.07e-07!12;UBERON:0007277!3.07e-07!12;UBERON:0000200!7.11e-07!6;UBERON:0000062!7.12e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.39e-43;34!UBERON:0002791;1.71e-39;32!UBERON:0003528;6.79e-39;34!UBERON:0002020;6.79e-39;34!UBERON:0001869;1.51e-38;32!UBERON:0002780;2.99e-37;41!UBERON:0001890;2.99e-37;41!UBERON:0000073;5.44e-35;53!UBERON:0002616;5.44e-35;53!UBERON:0001950;4.43e-30;20!UBERON:0000956;1.25e-27;25!UBERON:0000203;1.25e-27;25!UBERON:0002619;3.31e-27;22!UBERON:0001017;1.51e-25;75!UBERON:0000200;3.18e-24;6!UBERON:0000955;1.56e-22;68!UBERON:0000125;1.97e-21;9!UBERON:0002308;1.97e-21;9!UBERON:0009663;1.26e-20;7!UBERON:0001016;5.71e-19;83!UBERON:0000369;7.67e-17;4!UBERON:0002435;7.67e-17;4!UBERON:0000204;7.67e-17;4!UBERON:0002420;6.60e-16;9!UBERON:0007245;6.60e-16;9!UBERON:0010009;6.60e-16;9!UBERON:0010011;6.60e-16;9!UBERON:0000454;6.60e-16;9!UBERON:0007023;4.06e-14;114!UBERON:0001870;3.06e-13;3!UBERON:0005383;3.54e-13;3!UBERON:0005382;3.54e-13;3!UBERON:0004732;8.14e-11;13!UBERON:0002784;1.13e-09;4!UBERON:0002702;1.45e-09;2!UBERON:0001873;1.68e-09;2!UBERON:0001894;2.03e-09;7!UBERON:0002771;4.64e-09;2!UBERON:0001905;4.64e-09;2!UBERON:0005162;4.64e-09;2!UBERON:0000122;4.64e-09;2!UBERON:0002757;4.64e-09;2!UBERON:0010134;4.64e-09;2!UBERON:0005408;4.64e-09;2!UBERON:0001899;4.64e-09;2!UBERON:0011216;1.95e-08;132!UBERON:0004733;2.24e-08;12!UBERON:0002028;2.24e-08;12!UBERON:0002021;4.46e-08;5!UBERON:0001872;8.02e-08;5!UBERON:0002680;1.61e-07;9!UBERON:0001895;1.61e-07;9!UBERON:0010314;4.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.90e-66,56;UBERON:0005068,2.90e-66,56;UBERON:0006241,2.90e-66,56;UBERON:0007135,2.90e-66,56;UBERON:0000073,6.76e-66,53;UBERON:0002616,6.76e-66,53;UBERON:0002780,2.71e-59,41;UBERON:0001890,2.71e-59,41;UBERON:0003080,2.71e-59,41;UBERON:0006240,2.71e-59,41;UBERON:0001017,6.39e-56,81;UBERON:0000955,9.55e-53,68;UBERON:0006238,9.55e-53,68;UBERON:0001016,9.98e-53,89;UBERON:0001893,3.13e-51,34;UBERON:0003075,3.02e-49,82;UBERON:0007284,3.02e-49,82;UBERON:0003528,1.08e-46,34;UBERON:0002020,1.08e-46,34;UBERON:0002346,1.30e-46,86;UBERON:0001869,3.69e-45,32;UBERON:0002791,7.13e-45,32;UBERON:0003056,1.02e-44,61;UBERON:0007023,1.40e-43,114;UBERON:0010371,3.03e-37,104;UBERON:0010314,6.79e-34,132;UBERON:0001950,1.21e-30,20;UBERON:0000956,5.37e-28,25;UBERON:0000203,5.37e-28,25;UBERON:0002619,1.02e-27,22;UBERON:0004121,1.66e-25,171;UBERON:0000924,1.66e-25,171;UBERON:0006601,1.66e-25,171;UBERON:0000200,7.86e-25,6;UBERON:0000125,2.19e-21,9;UBERON:0002308,2.19e-21,9;UBERON:0009663,2.45e-20,7;UBERON:0000025,7.44e-18,192;UBERON:0011216,1.35e-17,223;UBERON:0000369,7.40e-17,4;UBERON:0002435,7.40e-17,4;UBERON:0000204,7.40e-17,4;UBERON:0010082,7.40e-17,4;UBERON:0002420,1.10e-15,9;UBERON:0007245,1.10e-15,9;UBERON:0010009,1.10e-15,9;UBERON:0010011,1.10e-15,9;UBERON:0000454,1.10e-15,9;UBERON:0004111,7.53e-15,240;UBERON:0001870,8.91e-14,3;UBERON:0005383,4.71e-13,3;UBERON:0005382,4.71e-13,3;UBERON:0000483,1.58e-11,306;UBERON:0000119,2.48e-11,309;UBERON:0004732,3.04e-11,13;UBERON:0002702,9.24e-10,2;UBERON:0002784,1.08e-09,4;UBERON:0001873,1.19e-09,2;UBERON:0010122,1.19e-09,2;UBERON:0003076,1.36e-09,15;UBERON:0003057,1.36e-09,15;UBERON:0001894,2.52e-09,7;UBERON:0006222,2.52e-09,7;UBERON:0002771,2.87e-09,2;UBERON:0001905,7.04e-09,2;UBERON:0002757,7.04e-09,2;UBERON:0010134,7.04e-09,2;UBERON:0005408,7.04e-09,2;UBERON:0001899,7.04e-09,2;UBERON:0004733,9.08e-09,12;UBERON:0002028,9.08e-09,12;UBERON:0007277,9.08e-09,12;UBERON:0005162,1.01e-08,2;UBERON:0000122,1.01e-08,2;UBERON:0001872,5.15e-08,5;UBERON:0002021,6.09e-08,5;UBERON:0002680,7.75e-08,9;UBERON:0001895,7.75e-08,9;UBERON:0010092,7.75e-08,9;UBERON:0002298,5.08e-07,6;UBERON:0000988,9.77e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0.492484232307152,0,0,1.14494394852423,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0.302714855289863,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.368199594569197,0,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0.393373244878272,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0.165018999841176,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.725083469571143,0,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.703347082052564,0,0,0.211125408127993,0,0,1.0077309914171,0.306806047506464,0.123084805461069,0,0,0,0,0,0,0,0,1.94813006139888,0,0,0,0,0.227586896570999,0,0,0,0,0,2.65722415744152,1.5677537021303,1.52581736317083,2.43274371848694,0.886642856860642,1.53569778007781,0,0,0.230850775511391,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,1.07841812769083,0,1.1713222286267,0,0,0,1.57833761139756,0,0.30607276163049,0.31593289814244,0,0.103688191397247,0,0,0.313932918407225,1.19472429772959,0,0.416024019039416,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,0.451961481561065,0.274083849293502,0,1.96263467463224,0,0,1.06726497369676,0,0,0.229073192331831,0.171594997861965,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,1.20084057741958,0.684526894459965,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.403100834920358,0,0,0.236349546921671,0.0824158583811665,0,0,0.169346664131569,0.795229689809303,0.817220436669454,0.160753148465019,0,0,0,0,1.70098758642469,0,0.236417121897595,0.262272940674991,0,0,0,1.42939065274673,1.32418394073086,0,1.08599920350743,0,0,0,0.082092520749339,0.170388021785422,0,0,0,1.93924434542326,0.79339561045614,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0.197611631897944,0,0,1.08803560673895,0.7520696820681,0,2.29510841496863,0.157054096250234,3.54427271986794,1.95242023843141,1.6274820991845,1.72022758707021,0.665574309221114,0.993542447062135,0,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0,0,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| ||
|short_description=p19@HMGB1 | |short_description=p19@HMGB1 | ||
}} | }} |
Latest revision as of 02:19, 17 September 2015
Short description: | p19@HMGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_HMGB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001usz.2_5end |
EntrezGene: | HMGB1 |
HGNC: | 4983 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data