FFCP PHASE1:Hg19::chr15:42697065..42697078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | ||
|cluster_id=chr15:42697065..42697078,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_8_at_CAPN3_5end | |description=CAGE_peak_8_at_CAPN3_5end | ||
|id=chr15:42697065..42697078,+ | |id=chr15:42697065..42697078,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | |ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.26e-18;10!CL:0000147;1.53e-16;14!CL:0002567;6.72e-13;3!CL:0000710;9.36e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-18,10;CL:0000541,1.33e-18,10;CL:0000147,1.81e-16,14;CL:0002567,6.73e-13,3;CL:0000710,9.59e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.72e-19;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.87e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.84e-49;34!UBERON:0003528;1.96e-47;34!UBERON:0002020;1.96e-47;34!UBERON:0002791;2.25e-45;32!UBERON:0001869;2.86e-45;32!UBERON:0002780;2.02e-41;41!UBERON:0001890;2.02e-41;41!UBERON:0000073;7.65e-41;53!UBERON:0002616;7.65e-41;53!UBERON:0002619;9.86e-40;22!UBERON:0001950;7.46e-39;20!UBERON:0000956;1.15e-34;25!UBERON:0000203;1.15e-34;25!UBERON:0000955;3.63e-26;68!UBERON:0001017;8.37e-26;75!UBERON:0000125;3.43e-25;9!UBERON:0002308;3.43e-25;9!UBERON:0002298;4.00e-22;6!UBERON:0000200;1.85e-20;6!UBERON:0001016;4.54e-20;83!UBERON:0002420;6.30e-19;9!UBERON:0007245;6.30e-19;9!UBERON:0010009;6.30e-19;9!UBERON:0010011;6.30e-19;9!UBERON:0000454;6.30e-19;9!UBERON:0009663;1.82e-18;7!UBERON:0004732;7.87e-17;13!UBERON:0007023;3.17e-16;114!UBERON:0004733;3.27e-14;12!UBERON:0002028;3.27e-14;12!UBERON:0000988;3.58e-12;3!UBERON:0001872;7.92e-12;5!UBERON:0001896;1.07e-11;3!UBERON:0005290;1.07e-11;3!UBERON:0002021;1.59e-11;5!UBERON:0001870;5.01e-11;3!UBERON:0011216;6.88e-09;132!UBERON:0001897;9.51e-09;2!UBERON:0010225;9.51e-09;2!UBERON:0002148;1.39e-08;2!UBERON:0006331;1.39e-08;2!UBERON:0009662;1.39e-08;2!UBERON:0000369;1.47e-08;4!UBERON:0002435;1.47e-08;4!UBERON:0000204;1.47e-08;4!UBERON:0001875;1.61e-08;2!UBERON:0006514;1.61e-08;2!UBERON:0005162;2.05e-08;2!UBERON:0000122;2.05e-08;2!UBERON:0001871;5.70e-08;6!UBERON:0002702;8.58e-08;2!UBERON:0002771;1.18e-07;2!UBERON:0010314;5.25e-07;132!UBERON:0000349;8.66e-07;5!UBERON:0002680;9.64e-07;9!UBERON:0001895;9.64e-07;9 | |||
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|short_description=p8@CAPN3 | |short_description=p8@CAPN3 | ||
}} | }} |
Latest revision as of 16:04, 17 September 2015
Short description: | p8@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 88bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-18 | 10 |
melanoblast | 1.33e-18 | 10 |
pigment cell | 1.81e-16 | 14 |
light melanocyte | 6.73e-13 | 3 |
neurecto-epithelial cell | 9.59e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.87e-09 | 2 |