FFCP PHASE1:Hg19::chr12:29302176..29302223,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:29302176..29302223,+
|short_description=p1@FAR2
|description=CAGE_peak_1_at_FAR2_5end
|association_with_transcript=0bp_to_ENST00000547411_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55711 | |EntrezGene=55711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25531 | |HGNC=25531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547411_5end | |||
|cluster_id=chr12:29302176..29302223,+ | |||
|description=CAGE_peak_1_at_FAR2_5end | |||
|id=chr12:29302176..29302223,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.54e-12!24;CL:0000763!6.20e-11!112;CL:0000049!6.20e-11!112;CL:0000115!2.55e-09!35;CL:0000071!9.79e-09!18;CL:0002546!9.79e-09!18;CL:0000766!4.59e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.71e-12;24!CL:0000071;4.24e-09;18!CL:0000115;9.90e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.39e-13,108;CL:0000049,7.39e-13,108;CL:0002139,3.17e-12,24;CL:0000115,7.13e-10,36;CL:0000071,4.89e-09,18;CL:0002546,4.89e-09,18;CL:0000766,5.00e-09,72;CL:0000839,1.08e-07,66;CL:0000557,1.94e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002546;4.24e-09;18 | |||
|ontology_enrichment_disease=DOID:8692!9.85e-09!31;DOID:1240!5.44e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.23e-09;31!DOID:1240;7.51e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.41e-09,31;DOID:1240,9.96e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.46e-10!32;UBERON:0002619!1.52e-09!22;UBERON:0001950!3.51e-09!20;UBERON:0001893!4.66e-09!34;UBERON:0002193!7.45e-09!112;UBERON:0001986!9.79e-09!18;UBERON:0004638!9.79e-09!18;UBERON:0004852!9.79e-09!18;UBERON:0002791!1.32e-08!33;UBERON:0002020!1.51e-08!34;UBERON:0003528!1.51e-08!34;UBERON:0002780!6.46e-08!41;UBERON:0001890!6.46e-08!41;UBERON:0006240!6.46e-08!41;UBERON:0003080!7.68e-08!42;UBERON:0000956!7.83e-08!25;UBERON:0000203!7.83e-08!25;UBERON:0002390!1.83e-07!102;UBERON:0003061!1.83e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.83e-10;22!UBERON:0001950;1.63e-09;20!UBERON:0001869;3.53e-09;32!UBERON:0004638;4.24e-09;18!UBERON:0001986;4.24e-09;18!UBERON:0004852;4.24e-09;18!UBERON:0002791;3.10e-08;32!UBERON:0001893;7.66e-08;34!UBERON:0000956;8.00e-08;25!UBERON:0000203;8.00e-08;25!UBERON:0003528;1.01e-07;34!UBERON:0002020;1.01e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.96e-11,108;UBERON:0001869,4.45e-10,32;UBERON:0002619,7.00e-10,22;UBERON:0002390,1.30e-09,98;UBERON:0003061,1.30e-09,98;UBERON:0001950,1.68e-09,20;UBERON:0004638,4.89e-09,18;UBERON:0001986,4.89e-09,18;UBERON:0004852,4.89e-09,18;UBERON:0002405,7.00e-09,93;UBERON:0002791,7.66e-09,32;UBERON:0001893,1.30e-08,34;UBERON:0003528,2.46e-08,34;UBERON:0002020,2.46e-08,34;UBERON:0000956,9.42e-08,25;UBERON:0000203,9.42e-08,25;UBERON:0003081,1.58e-07,203;UBERON:0002780,4.55e-07,41;UBERON:0001890,4.55e-07,41;UBERON:0003080,4.55e-07,41;UBERON:0006240,4.55e-07,41;UBERON:0002371,4.55e-07,76;UBERON:0004535,8.04e-07,109 | |||
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| ||
|short_description=p1@FAR2 | |||
}} | }} |
Latest revision as of 01:41, 18 September 2015
Short description: | p1@FAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547411_5end |
EntrezGene: | FAR2 |
HGNC: | 25531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.39e-13 | 108 |
common myeloid progenitor | 7.39e-13 | 108 |
endothelial cell of vascular tree | 3.17e-12 | 24 |
endothelial cell | 7.13e-10 | 36 |
blood vessel endothelial cell | 4.89e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.89e-09 | 18 |
myeloid leukocyte | 5.00e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.08e-07 | 66 |
granulocyte monocyte progenitor cell | 1.94e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.96e-11 | 108 |
cerebral hemisphere | 4.45e-10 | 32 |
regional part of cerebral cortex | 7.00e-10 | 22 |
hematopoietic system | 1.30e-09 | 98 |
blood island | 1.30e-09 | 98 |
neocortex | 1.68e-09 | 20 |
blood vessel endothelium | 4.89e-09 | 18 |
endothelium | 4.89e-09 | 18 |
cardiovascular system endothelium | 4.89e-09 | 18 |
immune system | 7.00e-09 | 93 |
regional part of telencephalon | 7.66e-09 | 32 |
telencephalon | 1.30e-08 | 34 |
brain grey matter | 2.46e-08 | 34 |
gray matter | 2.46e-08 | 34 |
cerebral cortex | 9.42e-08 | 25 |
pallium | 9.42e-08 | 25 |
lateral plate mesoderm | 1.58e-07 | 203 |
regional part of forebrain | 4.55e-07 | 41 |
forebrain | 4.55e-07 | 41 |
anterior neural tube | 4.55e-07 | 41 |
future forebrain | 4.55e-07 | 41 |
bone marrow | 4.55e-07 | 76 |
cardiovascular system | 8.04e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.41e-09 | 31 |
leukemia | 9.96e-08 | 39 |