FFCP PHASE1:Hg19::chr3:58612895..58612914,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11170 | |EntrezGene=11170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30827 | |HGNC=30827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=232bp_to_ENST00000497310_5end | |association_with_transcript=232bp_to_ENST00000497310_5end | ||
|cluster_id=chr3:58612895..58612914,- | |||
|description=CAGE_peak_12_at_FAM107A_5end | |description=CAGE_peak_12_at_FAM107A_5end | ||
|id=chr3:58612895..58612914,- | |id=chr3:58612895..58612914,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-12;82!UBERON:0008801;3.31e-09;1!UBERON:0006298;1.09e-08;1!UBERON:0006222;1.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.23e-73!57;UBERON:0005068!3.23e-73!57;UBERON:0006241!3.23e-73!57;UBERON:0007135!3.23e-73!57;UBERON:0005743!9.93e-68!86;UBERON:0001017!1.33e-67!82;UBERON:0002780!1.95e-67!41;UBERON:0001890!1.95e-67!41;UBERON:0006240!1.95e-67!41;UBERON:0002616!1.64e-66!59;UBERON:0000955!7.60e-66!69;UBERON:0006238!7.60e-66!69;UBERON:0003080!1.08e-65!42;UBERON:0007023!5.31e-61!115;UBERON:0000073!1.62e-60!94;UBERON:0001016!1.62e-60!94;UBERON:0001893!4.47e-60!34;UBERON:0003075!4.15e-58!86;UBERON:0007284!4.15e-58!86;UBERON:0002791!5.26e-57!33;UBERON:0002346!3.92e-55!90;UBERON:0002020!7.94e-55!34;UBERON:0003528!7.94e-55!34;UBERON:0001869!7.97e-54!32;UBERON:0003056!1.96e-53!61;UBERON:0000033!3.86e-50!123;UBERON:0000153!2.26e-47!129;UBERON:0007811!2.26e-47!129;UBERON:0002619!6.70e-43!22;UBERON:0004121!3.28e-39!169;UBERON:0000924!4.45e-38!173;UBERON:0006601!4.45e-38!173;UBERON:0000956!1.91e-37!25;UBERON:0000203!1.91e-37!25;UBERON:0001950!2.27e-36!20;UBERON:0002420!8.84e-25!9;UBERON:0007245!8.84e-25!9;UBERON:0010009!8.84e-25!9;UBERON:0010011!8.84e-25!9;UBERON:0000454!8.84e-25!9;UBERON:0000349!7.41e-19!5;UBERON:0002308!8.67e-19!9;UBERON:0000125!8.67e-19!9;UBERON:0009663!2.77e-18!7;UBERON:0000025!1.02e-16!194;UBERON:0001871!3.96e-16!7;UBERON:0004111!5.96e-16!241;UBERON:0000200!5.37e-15!6;UBERON:0000369!7.84e-15!4;UBERON:0002435!7.84e-15!4;UBERON:0000204!7.84e-15!4;UBERON:0010082!7.84e-15!4;UBERON:0000477!9.64e-15!286;UBERON:0000475!1.79e-13!365;UBERON:0000064!1.35e-12!219;UBERON:0001872!5.08e-12!5;UBERON:0002771!1.35e-11!3;UBERON:0005383!2.17e-11!3;UBERON:0005382!2.17e-11!3;UBERON:0001044!1.30e-10!6;UBERON:0003293!1.30e-10!6;UBERON:0003294!1.30e-10!6;UBERON:0010047!1.30e-10!6;UBERON:0000167!1.30e-10!6;UBERON:0002298!1.86e-10!8;UBERON:0000483!2.76e-10!309;UBERON:0003076!3.19e-10!15;UBERON:0003057!3.19e-10!15;UBERON:0000119!4.25e-10!312;UBERON:0004733!1.05e-09!12;UBERON:0002028!1.05e-09!12;UBERON:0007277!1.05e-09!12;UBERON:0001829!6.02e-09!2;UBERON:0004732!6.50e-09!13;UBERON:0001894!7.02e-09!7;UBERON:0006222!7.02e-09!7;UBERON:0000481!7.72e-09!347;UBERON:0001954!8.49e-09!2;UBERON:0003022!8.49e-09!2;UBERON:0002421!8.49e-09!2;UBERON:0002600!8.49e-09!2;UBERON:0001897!1.55e-08!2;UBERON:0000062!1.95e-08!511;UBERON:0001876!2.51e-08!2;UBERON:0001873!2.81e-08!2;UBERON:0010122!2.81e-08!2;UBERON:0002021!1.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.55e-41;41!UBERON:0001890;4.55e-41;41!UBERON:0001893;1.45e-38;34!UBERON:0002619;7.00e-37;22!UBERON:0002791;3.60e-35;32!UBERON:0001869;4.52e-35;32!UBERON:0003528;2.58e-33;34!UBERON:0002020;2.58e-33;34!UBERON:0000956;2.04e-32;25!UBERON:0000203;2.04e-32;25!UBERON:0001950;5.29e-27;20!UBERON:0000073;1.28e-24;53!UBERON:0002616;1.28e-24;53!UBERON:0001829;3.55e-16;2!UBERON:0007023;4.45e-16;114!UBERON:0001954;4.63e-16;2!UBERON:0003022;4.63e-16;2!UBERON:0002421;4.63e-16;2!UBERON:0002600;4.63e-16;2!UBERON:0000955;1.25e-15;68!UBERON:0001017;2.31e-15;75!UBERON:0002021;4.87e-14;5!UBERON:0000349;4.87e-14;5!UBERON:0001044;4.27e-12;6!UBERON:0003293;4.27e-12;6!UBERON:0003294;4.27e-12;6!UBERON:0010047;4.27e-12;6!UBERON:0003408;4.27e-12;6!UBERON:0000167;4.27e-12;6!UBERON:0001016;2.00e-11;83!UBERON:0001894;5.14e-10;7!UBERON:0009663;5.14e-10;7!UBERON:0001831;3.31e-09;1!UBERON:0001567;3.31e-09;1!UBERON:0003112;4.34e-09;1!UBERON:0011158;4.34e-09;1!UBERON:0003128;4.34e-09;1!UBERON:0001703;4.34e-09;1!UBERON:0002241;4.34e-09;1!UBERON:0011216;1.07e-08;132!UBERON:0002902;1.09e-08;1!UBERON:0001882;1.09e-08;1!UBERON:0002022;1.09e-08;1!UBERON:0002336;1.09e-08;1!UBERON:0001736;1.09e-08;1!UBERON:0011215;1.09e-08;1!UBERON:0001018;1.09e-08;1!UBERON:0002473;1.09e-08;1!UBERON:0005340;1.09e-08;1!UBERON:0003544;1.09e-08;1!UBERON:0005970;1.09e-08;1!UBERON:0009899;1.09e-08;1!UBERON:0002316;1.09e-08;1!UBERON:0001020;1.09e-08;1!UBERON:0005403;1.09e-08;1!UBERON:0002437;1.09e-08;1!UBERON:0000369;2.77e-08;4!UBERON:0002435;2.77e-08;4!UBERON:0002784;2.77e-08;4!UBERON:0000204;2.77e-08;4!UBERON:0002420;6.76e-08;9!UBERON:0000125;6.76e-08;9!UBERON:0007245;6.76e-08;9!UBERON:0002308;6.76e-08;9!UBERON:0010009;6.76e-08;9!UBERON:0010011;6.76e-08;9!UBERON:0000454;6.76e-08;9!UBERON:0001872;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.51e-53,41;UBERON:0001890,5.51e-53,41;UBERON:0003080,5.51e-53,41;UBERON:0006240,5.51e-53,41;UBERON:0001893,4.20e-44,34;UBERON:0002791,1.05e-40,32;UBERON:0001869,1.05e-40,32;UBERON:0000073,1.71e-40,53;UBERON:0002616,1.71e-40,53;UBERON:0007023,6.59e-40,114;UBERON:0003056,3.35e-39,61;UBERON:0000955,2.73e-38,68;UBERON:0006238,2.73e-38,68;UBERON:0003528,3.09e-38,34;UBERON:0002020,3.09e-38,34;UBERON:0001049,3.43e-38,56;UBERON:0005068,3.43e-38,56;UBERON:0006241,3.43e-38,56;UBERON:0007135,3.43e-38,56;UBERON:0002619,2.06e-36,22;UBERON:0001017,2.60e-35,81;UBERON:0000956,5.28e-32,25;UBERON:0000203,5.28e-32,25;UBERON:0001016,1.70e-31,89;UBERON:0003075,2.06e-28,82;UBERON:0007284,2.06e-28,82;UBERON:0002346,6.02e-27,86;UBERON:0001950,1.18e-26,20;UBERON:0004121,1.53e-22,171;UBERON:0000924,1.53e-22,171;UBERON:0006601,1.53e-22,171;UBERON:0010371,9.92e-22,104;UBERON:0010314,1.75e-18,132;UBERON:0011216,2.73e-16,223;UBERON:0001829,3.44e-16,2;UBERON:0001954,6.78e-16,2;UBERON:0003022,6.78e-16,2;UBERON:0002421,6.78e-16,2;UBERON:0002600,6.78e-16,2;UBERON:0000349,6.82e-14,5;UBERON:0002021,7.79e-14,5;UBERON:0001044,4.05e-12,6;UBERON:0003293,4.05e-12,6;UBERON:0003294,4.05e-12,6;UBERON:0010047,4.05e-12,6;UBERON:0000167,4.05e-12,6;UBERON:0001894,4.48e-10,7;UBERON:0009663,4.48e-10,7;UBERON:0006222,4.48e-10,7;UBERON:0004111,1.15e-09,240;UBERON:0001831,3.58e-09,1;UBERON:0001567,3.58e-09,1;UBERON:0008801,3.58e-09,1;UBERON:0003112,4.19e-09,1;UBERON:0011158,4.19e-09,1;UBERON:0003128,4.19e-09,1;UBERON:0001703,4.19e-09,1;UBERON:0002241,4.19e-09,1;UBERON:0004761,4.19e-09,1;UBERON:0009617,4.19e-09,1;UBERON:0000025,6.39e-09,192;UBERON:0002336,8.36e-09,1;UBERON:0011215,8.36e-09,1;UBERON:0001018,8.36e-09,1;UBERON:0002473,8.36e-09,1;UBERON:0005340,8.36e-09,1;UBERON:0003544,8.36e-09,1;UBERON:0005970,8.36e-09,1;UBERON:0002316,8.36e-09,1;UBERON:0001020,8.36e-09,1;UBERON:0002437,8.36e-09,1;UBERON:0001736,9.74e-09,1;UBERON:0006298,9.74e-09,1;UBERON:0002902,1.22e-08,1;UBERON:0009899,1.22e-08,1;UBERON:0001882,1.32e-08,1;UBERON:0005403,1.32e-08,1;UBERON:0002022,1.65e-08,1;UBERON:0000369,2.40e-08,4;UBERON:0002435,2.40e-08,4;UBERON:0000204,2.40e-08,4;UBERON:0010082,2.40e-08,4;UBERON:0002784,3.10e-08,4;UBERON:0002420,6.08e-08,9;UBERON:0000125,6.08e-08,9;UBERON:0007245,6.08e-08,9;UBERON:0002308,6.08e-08,9;UBERON:0010009,6.08e-08,9;UBERON:0010011,6.08e-08,9;UBERON:0000454,6.08e-08,9;UBERON:0003408,1.86e-07,10;UBERON:0001872,9.73e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.94813006139888,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.552896299656123,0.591095237907095,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,1.87411556580271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,2.38568906942791,1.0896272488926,0,0,0,0,0,1.09349201984444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,2.23487402680012,1.02558182120378,0,1.31398779682014,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0.620060389503552,1.01465296310251,0,4.38606213485746,0,0,0,1.07140367175657,0,0,0,0,0,0,0.271878931907327,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,4.50302228312935,0.158013611732727,0,0,0,0,0,0.691259661814092,4.73250094702305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,1.37618785021362,0.573358332605805,0,1.49581278420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.55149493792843,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.94813006139888,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.552896299656123,0.591095237907095,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,1.87411556580271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,2.38568906942791,1.0896272488926,0,0,0,0,0,1.09349201984444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,2.23487402680012,1.02558182120378,0,1.31398779682014,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0.620060389503552,1.01465296310251,0,4.38606213485746,0,0,0,1.07140367175657,0,0,0,0,0,0,0.271878931907327,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,4.50302228312935,0.158013611732727,0,0,0,0,0,0.691259661814092,4.73250094702305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,1.37618785021362,0.573358332605805,0,1.49581278420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.55149493792843,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@FAM107A | |short_description=p12@FAM107A | ||
}} | }} |
Latest revision as of 06:31, 19 September 2015
Short description: | p12@FAM107A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM107A_5end |
Coexpression cluster: | NA |
Association with transcript: | 232bp_to_ENST00000497310_5end |
EntrezGene: | FAM107A |
HGNC: | 30827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data