FFCP PHASE1:Hg19::chr12:83080724..83080741,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:83080724..83080741,+
|short_description=p3@TMTC2
|description=CAGE_peak_3_at_TMTC2_5end
|association_with_transcript=-38bp_to_ENST00000548305_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=160335 | |EntrezGene=160335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25440 | |HGNC=25440 | ||
|TSSclassifier=strong | |||
|UniProt=F8VSH2 | |UniProt=F8VSH2 | ||
|association_with_transcript=-38bp_to_ENST00000548305_5end | |||
|cluster_id=chr12:83080724..83080741,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_TMTC2_5end | |||
|id=chr12:83080724..83080741,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.00e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-27!57;UBERON:0005068!3.00e-27!57;UBERON:0006241!3.00e-27!57;UBERON:0007135!3.00e-27!57;UBERON:0001017!3.74e-25!82;UBERON:0005743!1.69e-24!86;UBERON:0000073!2.83e-24!94;UBERON:0001016!2.83e-24!94;UBERON:0003075!1.19e-23!86;UBERON:0007284!1.19e-23!86;UBERON:0001893!7.44e-23!34;UBERON:0002020!7.77e-23!34;UBERON:0003528!7.77e-23!34;UBERON:0000955!7.97e-23!69;UBERON:0006238!7.97e-23!69;UBERON:0002780!2.65e-22!41;UBERON:0001890!2.65e-22!41;UBERON:0006240!2.65e-22!41;UBERON:0002791!3.78e-22!33;UBERON:0002616!7.04e-22!59;UBERON:0002346!8.70e-22!90;UBERON:0003080!2.76e-21!42;UBERON:0001869!2.96e-21!32;UBERON:0007023!6.71e-21!115;UBERON:0003056!6.60e-20!61;UBERON:0000956!2.47e-16!25;UBERON:0000203!2.47e-16!25;UBERON:0004121!4.29e-15!169;UBERON:0002619!6.76e-15!22;UBERON:0000924!2.96e-14!173;UBERON:0006601!2.96e-14!173;UBERON:0001950!1.42e-13!20;UBERON:0000153!1.14e-12!129;UBERON:0007811!1.14e-12!129;UBERON:0000033!1.91e-12!123;UBERON:0002308!5.22e-08!9;UBERON:0000125!5.22e-08!9;UBERON:0002420!6.85e-08!9;UBERON:0007245!6.85e-08!9;UBERON:0010009!6.85e-08!9;UBERON:0010011!6.85e-08!9;UBERON:0000454!6.85e-08!9;UBERON:0000064!7.26e-08!219;UBERON:0003076!3.64e-07!15;UBERON:0003057!3.64e-07!15;UBERON:0000025!5.63e-07!194;UBERON:0000062!5.68e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.97e-40;34!UBERON:0003528;1.21e-39;34!UBERON:0002020;1.21e-39;34!UBERON:0002791;1.06e-38;32!UBERON:0001869;1.44e-38;32!UBERON:0002780;7.80e-35;41!UBERON:0001890;7.80e-35;41!UBERON:0000956;2.50e-32;25!UBERON:0000203;2.50e-32;25!UBERON:0000073;3.66e-32;53!UBERON:0002616;3.66e-32;53!UBERON:0002619;1.31e-31;22!UBERON:0001950;1.07e-28;20!UBERON:0000955;8.48e-23;68!UBERON:0001017;1.06e-20;75!UBERON:0001016;1.53e-17;83!UBERON:0000125;1.03e-15;9!UBERON:0002308;1.03e-15;9!UBERON:0002420;2.01e-15;9!UBERON:0007245;2.01e-15;9!UBERON:0010009;2.01e-15;9!UBERON:0010011;2.01e-15;9!UBERON:0000454;2.01e-15;9!UBERON:0009663;1.69e-12;7!UBERON:0002298;4.14e-11;6!UBERON:0000200;2.15e-10;6!UBERON:0007023;4.89e-10;114!UBERON:0004732;7.48e-10;13!UBERON:0001872;2.09e-09;5!UBERON:0000349;6.66e-09;5!UBERON:0002021;1.24e-08;5!UBERON:0001871;1.91e-08;6!UBERON:0004733;1.94e-08;12!UBERON:0002028;1.94e-08;12!UBERON:0011216;6.35e-08;132!UBERON:0000369;2.30e-07;4!UBERON:0002435;2.30e-07;4!UBERON:0000204;2.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.14e-60,56;UBERON:0005068,9.14e-60,56;UBERON:0006241,9.14e-60,56;UBERON:0007135,9.14e-60,56;UBERON:0000073,5.97e-55,53;UBERON:0002616,5.97e-55,53;UBERON:0001017,2.09e-53,81;UBERON:0001016,2.33e-50,89;UBERON:0000955,3.02e-49,68;UBERON:0006238,3.02e-49,68;UBERON:0003075,1.14e-48,82;UBERON:0007284,1.14e-48,82;UBERON:0002780,3.62e-48,41;UBERON:0001890,3.62e-48,41;UBERON:0003080,3.62e-48,41;UBERON:0006240,3.62e-48,41;UBERON:0001893,1.26e-46,34;UBERON:0003528,1.38e-46,34;UBERON:0002020,1.38e-46,34;UBERON:0002346,1.39e-45,86;UBERON:0002791,2.65e-43,32;UBERON:0001869,3.96e-43,32;UBERON:0010371,3.39e-41,104;UBERON:0003056,6.97e-40,61;UBERON:0000956,2.26e-32,25;UBERON:0000203,2.26e-32,25;UBERON:0010314,3.69e-32,132;UBERON:0007023,4.67e-32,114;UBERON:0002619,1.38e-31,22;UBERON:0004121,5.16e-31,171;UBERON:0000924,5.16e-31,171;UBERON:0006601,5.16e-31,171;UBERON:0001950,1.10e-28,20;UBERON:0011216,5.58e-19,223;UBERON:0000125,1.31e-15,9;UBERON:0002308,1.31e-15,9;UBERON:0002420,2.37e-15,9;UBERON:0007245,2.37e-15,9;UBERON:0010009,2.37e-15,9;UBERON:0010011,2.37e-15,9;UBERON:0000454,2.37e-15,9;UBERON:0000025,7.06e-15,192;UBERON:0003076,1.42e-12,15;UBERON:0003057,1.42e-12,15;UBERON:0009663,2.07e-12,7;UBERON:0002298,3.93e-11,6;UBERON:0000200,2.04e-10,6;UBERON:0004111,7.33e-10,240;UBERON:0004732,7.37e-10,13;UBERON:0001872,2.19e-09,5;UBERON:0000483,2.52e-09,306;UBERON:0000119,4.60e-09,309;UBERON:0000349,6.41e-09,5;UBERON:0002021,1.14e-08,5;UBERON:0004733,1.90e-08,12;UBERON:0002028,1.90e-08,12;UBERON:0007277,1.90e-08,12;UBERON:0001871,1.99e-08,6;UBERON:0000369,2.78e-07,4;UBERON:0002435,2.78e-07,4;UBERON:0000204,2.78e-07,4;UBERON:0010082,2.78e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0.527533956456907,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0.492484232307152,0,0.313454721478088,2.28988789704845,0.821246550437305,1.50651167513763,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0,1.10799081706375,2.20598892217156,0.434021741431704,0,0,0.257575567634187,0,0,0.242584061187816,0,0.411167888021826,0,0.575384784644301,0.768482119587302,0.709446689665756,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,0,1.06302149982522,0.209658645508376,0.786300418025466,0.300353785683013,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.443067789167242,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0,4.87613732627923,0,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,0,0,1.60709189178915,0.221729397462564,0.263504357079378,1.24430121722827,0.364295288292542,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,1.13061588384802,0,0,0,0.775250277507987,0,0.66944122552934,0,0.760272105718513,0.24406205754817,0,0,0,0.44905874525234,0,0,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0,0,0,7.17091551872034,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,1.34710672069688,0.490385709340376,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0.423863802319124,0.300091096084402,0.206105058476878,1.03056216018252,0.18611685633159,0,0.0974370051611986,0,0,0.646584227275248,0,0,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0.504641701751257,0,0,0,1.38134921352481,0,0,0,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,4.9850074139283,0.587043471179108,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.317489471460845,1.14596527667483,0,1.71072446022705,2.05654985406647,0.901029173531752,7.71731368102561,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0.591092280605782,0,0.513372145118994,0.254094624222463,0,3.86644406388848,2.51274398001523,4.46557126157214,0,0,0,0.858840442033979,0,0,0,0,0.473107245101804,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0.647142602455851,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.515205058238611,3.02179233900533,2.55779449753823,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0.62962469366128,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0.855877976067841,0.636406495851874,0.78494864019923,0.179872457583315,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0,0,0,0.272999822815972,0.707027159768564,0,2.75682671773062,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0.973865820823666,0.280797178113459,0,0.156679895773023,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.293016358543788,0,0.222886768554957,0,1.43246690842614,5.3453642549875,1.84296421259539,3.97659059106519,6.18945432206256,0.111308705022906,0.16480387422676,0,0.19924798825107,3.59169090190492,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0.789147245095469,0,0,8.72399471485697,4.63840490809256,1.99613798001194,0.7812832832557,0.787139999965761,0,0,0,0.472775363535873,0.689486746482929,0.291604613383254,4.34062487333231,6.20018970069687,3.0149109656352,0,2.21158519862449,2.65992857058193,1.53569778007781,0,0.41827123283581,1.00035336054936,0.113942055847001,0.23056390438806,0,0.108647371922008,2.87101043758728,0.824378340616761,0,1.02193298195737,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,1.23840590304675,1.83309043480088,0,0,0,16.7154809792079,0.802577647298789,11.2446933948163,0,0.19566461893209,0,1.18375320854817,0,1.22429104652196,0.126373159256976,0,0.103688191397247,0,0,0,1.19472429772959,0,0.277349346026277,0.694238953340524,0.0979923974143777,0.174118413160805,0.34945333648406,0.17198603247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|short_description=p3@TMTC2 | |||
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Latest revision as of 02:45, 25 September 2015
Short description: | p3@TMTC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMTC2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -38bp_to_ENST00000548305_5end |
EntrezGene: | TMTC2 |
HGNC: | 25440 |
UniProt: | F8VSH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data