FFCP PHASE1:Hg19::chr13:111855399..111855413,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:111855399..111855413,+
|short_description=p4@ARHGEF7
|description=CAGE_peak_4_at_ARHGEF7_5end
|association_with_transcript=0bp_to_ENST00000426768,uc010tjo...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENL8 | |UniProt=E7ENL8 | ||
|association_with_transcript=0bp_to_ENST00000426768,uc010tjo.1_5end | |||
|cluster_id=chr13:111855399..111855413,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_4_at_ARHGEF7_5end | |||
|id=chr13:111855399..111855413,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.20e-18!24;CL:0000222!1.56e-14!119;CL:0000115!1.92e-14!35;CL:0000071!7.33e-14!18;CL:0002546!7.33e-14!18;CL:0000183!6.55e-11!59;CL:0000187!1.06e-10!54;CL:0000359!1.22e-10!32;CL:0000680!1.56e-10!57;CL:0000056!1.56e-10!57;CL:0000355!1.56e-10!57;CL:0000192!2.06e-10!42;CL:0000514!2.06e-10!42;CL:0000393!1.27e-09!60;CL:0000211!1.27e-09!60;CL:0002078!1.81e-08!44;CL:1000413!1.03e-07!9;CL:0000213!3.47e-07!57;CL:0000215!3.47e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.65e-23;24!CL:0000071;1.81e-17;18!CL:0000115;5.00e-17;36!CL:0000359;3.63e-10;32!CL:1000413;1.61e-09;9!CL:0002078;6.95e-09;45!CL:0000213;3.88e-07;58!CL:0000215;3.88e-07;58!CL:0002138;4.68e-07;6!CL:0002544;6.61e-07;6!CL:0000192;7.74e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.09e-23,24;CL:0000115,5.05e-20,36;CL:0000071,1.87e-17,18;CL:0002546,1.87e-17,18;CL:0000222,6.47e-15,121;CL:0002078,2.62e-13,45;CL:0000359,1.27e-10,32;CL:0000213,4.30e-10,58;CL:0000215,4.30e-10,58;CL:0000192,1.55e-09,43;CL:0000514,1.55e-09,43;CL:1000413,1.63e-09,9;CL:0000187,2.49e-08,55;CL:0000680,2.37e-07,58;CL:0000056,2.37e-07,58;CL:0000355,2.37e-07,58;CL:0005020,4.86e-07,6;CL:0002138,4.86e-07,6;CL:0005022,4.86e-07,6;CL:0000393,5.81e-07,61;CL:0000211,5.81e-07,61;CL:0002544,6.67e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.81e-17;18!CL:0005022;4.68e-07;6!CL:0000514;7.74e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.81e-17;18!UBERON:0001986;1.81e-17;18!UBERON:0004852;1.81e-17;18!UBERON:0000055;1.10e-15;65!UBERON:0007500;2.16e-15;56!UBERON:0001981;2.16e-15;56!UBERON:0004537;2.16e-15;56!UBERON:0002049;5.96e-15;75!UBERON:0007798;5.96e-15;75!UBERON:0001637;1.52e-14;42!UBERON:0003509;1.52e-14;42!UBERON:0004572;1.52e-14;42!UBERON:0000487;8.21e-14;22!UBERON:0007100;2.68e-12;25!UBERON:0002619;6.74e-12;22!UBERON:0004573;1.22e-11;33!UBERON:0004571;1.22e-11;33!UBERON:0001009;2.19e-11;112!UBERON:0001950;3.50e-11;20!UBERON:0006914;3.78e-11;25!UBERON:0001869;4.18e-11;32!UBERON:0003528;4.40e-11;34!UBERON:0002020;4.40e-11;34!UBERON:0002791;5.78e-11;32!UBERON:0000948;1.06e-10;22!UBERON:0000956;1.83e-10;25!UBERON:0000203;1.83e-10;25!UBERON:0001893;3.67e-10;34!UBERON:0004535;4.14e-10;109!UBERON:0003915;1.61e-09;9!UBERON:0004700;1.61e-09;9!UBERON:0001917;1.61e-09;9!UBERON:0002780;5.79e-09;41!UBERON:0001890;5.79e-09;41!UBERON:0003914;8.79e-09;74!UBERON:0000947;2.41e-08;21!UBERON:0010191;2.41e-08;21!UBERON:0001638;4.07e-08;9!UBERON:0003920;4.07e-08;9!UBERON:0004582;4.07e-08;9!UBERON:0000490;5.53e-08;33!UBERON:0000073;9.01e-07;53!UBERON:0002616;9.01e-07;53!UBERON:0010260;9.05e-07;9 | |||
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| ||
|short_description=p4@ARHGEF7 | |||
}} | }} |
Latest revision as of 14:05, 16 September 2015
Short description: | p4@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF7_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_ENST00000426768, uc010tjo.1_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | E7ENL8 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.09e-23 | 24 |
endothelial cell | 5.05e-20 | 36 |
blood vessel endothelial cell | 1.87e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.87e-17 | 18 |
mesodermal cell | 6.47e-15 | 121 |
meso-epithelial cell | 2.62e-13 | 45 |
vascular associated smooth muscle cell | 1.27e-10 | 32 |
lining cell | 4.30e-10 | 58 |
barrier cell | 4.30e-10 | 58 |
smooth muscle cell | 1.55e-09 | 43 |
smooth muscle myoblast | 1.55e-09 | 43 |
endothelial cell of artery | 1.63e-09 | 9 |
muscle cell | 2.49e-08 | 55 |
muscle precursor cell | 2.37e-07 | 58 |
myoblast | 2.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.37e-07 | 58 |
lymphangioblast | 4.86e-07 | 6 |
endothelial cell of lymphatic vessel | 4.86e-07 | 6 |
vascular lymphangioblast | 4.86e-07 | 6 |
electrically responsive cell | 5.81e-07 | 61 |
electrically active cell | 5.81e-07 | 61 |
aortic endothelial cell | 6.67e-07 | 6 |