FFCP PHASE1:Hg19::chr22:42372764..42372868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55964 | |EntrezGene=55964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10750 | |HGNC=10750 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UH03,B1AHR1 | |UniProt=Q9UH03,B1AHR1 | ||
|association_with_transcript=0bp_to_ENST00000396426,ENST00000406029_5end | |association_with_transcript=0bp_to_ENST00000396426,ENST00000406029_5end | ||
|cluster_id=chr22:42372764..42372868,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SEPT3_5end | |description=CAGE_peak_1_at_SEPT3_5end | ||
|id=chr22:42372764..42372868,+ | |id=chr22:42372764..42372868,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.16e-08!59;CL:0002319!5.05e-08!25 | |ontology_enrichment_celltype=CL:0000133!1.16e-08!59;CL:0002319!5.05e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.93e-10;25!CL:0000540;8.94e-07;6!CL:0000404;8.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.03e-10,59;CL:0002319,6.40e-10,25;CL:0000047,1.79e-08,8;CL:0000333,4.58e-08,41;CL:0000540,8.67e-07,6;CL:0000031,8.67e-07,6;CL:0000404,8.67e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.07e-14;82!CL:0000031;8.94e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!6.66e-09!143;DOID:162!1.33e-07!235;DOID:14566!7.41e-07!239 | |ontology_enrichment_disease=DOID:0050687!6.66e-09!143;DOID:162!1.33e-07!235;DOID:14566!7.41e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.66e-07;22!DOID:2994;1.66e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.67e-07,22;DOID:2994,1.67e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.47e-44!94;UBERON:0001016!4.47e-44!94;UBERON:0005743!4.88e-43!86;UBERON:0001017!3.45e-42!82;UBERON:0001049!3.47e-36!57;UBERON:0005068!3.47e-36!57;UBERON:0006241!3.47e-36!57;UBERON:0007135!3.47e-36!57;UBERON:0000955!4.30e-34!69;UBERON:0006238!4.30e-34!69;UBERON:0002346!3.18e-31!90;UBERON:0002616!5.76e-31!59;UBERON:0003075!2.58e-30!86;UBERON:0007284!2.58e-30!86;UBERON:0003080!5.90e-28!42;UBERON:0002780!8.46e-28!41;UBERON:0001890!8.46e-28!41;UBERON:0006240!8.46e-28!41;UBERON:0000924!2.31e-27!173;UBERON:0006601!2.31e-27!173;UBERON:0004121!2.39e-26!169;UBERON:0001893!3.15e-24!34;UBERON:0002020!3.80e-24!34;UBERON:0003528!3.80e-24!34;UBERON:0002791!1.74e-23!33;UBERON:0001869!4.48e-23!32;UBERON:0003056!8.69e-23!61;UBERON:0000033!1.91e-21!123;UBERON:0000153!4.50e-20!129;UBERON:0007811!4.50e-20!129;UBERON:0000956!1.92e-18!25;UBERON:0000203!1.92e-18!25;UBERON:0002619!3.32e-17!22;UBERON:0001950!9.42e-16!20;UBERON:0007023!4.05e-14!115;UBERON:0003076!2.86e-09!15;UBERON:0003057!2.86e-09!15;UBERON:0004732!4.67e-08!13;UBERON:0004733!1.75e-07!12;UBERON:0002028!1.75e-07!12;UBERON:0007277!1.75e-07!12;UBERON:0000064!2.15e-07!219;UBERON:0002420!2.62e-07!9;UBERON:0007245!2.62e-07!9;UBERON:0010009!2.62e-07!9;UBERON:0010011!2.62e-07!9;UBERON:0000454!2.62e-07!9;UBERON:0002308!3.82e-07!9;UBERON:0000125!3.82e-07!9;UBERON:0000062!9.49e-07!511 | |ontology_enrichment_uberon=UBERON:0000073!4.47e-44!94;UBERON:0001016!4.47e-44!94;UBERON:0005743!4.88e-43!86;UBERON:0001017!3.45e-42!82;UBERON:0001049!3.47e-36!57;UBERON:0005068!3.47e-36!57;UBERON:0006241!3.47e-36!57;UBERON:0007135!3.47e-36!57;UBERON:0000955!4.30e-34!69;UBERON:0006238!4.30e-34!69;UBERON:0002346!3.18e-31!90;UBERON:0002616!5.76e-31!59;UBERON:0003075!2.58e-30!86;UBERON:0007284!2.58e-30!86;UBERON:0003080!5.90e-28!42;UBERON:0002780!8.46e-28!41;UBERON:0001890!8.46e-28!41;UBERON:0006240!8.46e-28!41;UBERON:0000924!2.31e-27!173;UBERON:0006601!2.31e-27!173;UBERON:0004121!2.39e-26!169;UBERON:0001893!3.15e-24!34;UBERON:0002020!3.80e-24!34;UBERON:0003528!3.80e-24!34;UBERON:0002791!1.74e-23!33;UBERON:0001869!4.48e-23!32;UBERON:0003056!8.69e-23!61;UBERON:0000033!1.91e-21!123;UBERON:0000153!4.50e-20!129;UBERON:0007811!4.50e-20!129;UBERON:0000956!1.92e-18!25;UBERON:0000203!1.92e-18!25;UBERON:0002619!3.32e-17!22;UBERON:0001950!9.42e-16!20;UBERON:0007023!4.05e-14!115;UBERON:0003076!2.86e-09!15;UBERON:0003057!2.86e-09!15;UBERON:0004732!4.67e-08!13;UBERON:0004733!1.75e-07!12;UBERON:0002028!1.75e-07!12;UBERON:0007277!1.75e-07!12;UBERON:0000064!2.15e-07!219;UBERON:0002420!2.62e-07!9;UBERON:0007245!2.62e-07!9;UBERON:0010009!2.62e-07!9;UBERON:0010011!2.62e-07!9;UBERON:0000454!2.62e-07!9;UBERON:0002308!3.82e-07!9;UBERON:0000125!3.82e-07!9;UBERON:0000062!9.49e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.47e-30;32!UBERON:0001893;1.64e-30;34!UBERON:0003528;2.05e-30;34!UBERON:0002020;2.05e-30;34!UBERON:0002791;2.63e-30;32!UBERON:0002780;2.23e-29;41!UBERON:0001890;2.23e-29;41!UBERON:0000073;4.60e-28;53!UBERON:0002616;4.60e-28;53!UBERON:0000956;8.13e-27;25!UBERON:0000203;8.13e-27;25!UBERON:0002619;5.31e-25;22!UBERON:0001950;7.91e-23;20!UBERON:0000955;1.60e-21;68!UBERON:0001016;2.29e-20;83!UBERON:0001017;5.82e-20;75!UBERON:0002420;3.94e-10;9!UBERON:0007245;3.94e-10;9!UBERON:0010009;3.94e-10;9!UBERON:0010011;3.94e-10;9!UBERON:0000454;3.94e-10;9!UBERON:0004732;4.21e-10;13!UBERON:0000125;6.98e-10;9!UBERON:0002308;6.98e-10;9!UBERON:0004733;2.95e-09;12!UBERON:0002028;2.95e-09;12!UBERON:0001871;4.01e-08;6!UBERON:0009663;4.80e-08;7!UBERON:0000200;7.01e-08;6!UBERON:0000922;3.82e-07;49!UBERON:0002298;4.36e-07;6!UBERON:0001872;6.37e-07;5!UBERON:0000349;7.09e-07;5!UBERON:0001894;8.41e-07;7!UBERON:0002021;9.67e-07;5 | |||
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| ||
|short_description=p1@SEPT3 | |short_description=p1@SEPT3 | ||
}} | }} |
Latest revision as of 23:08, 24 September 2015
Short description: | p1@SEPT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPT3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000396426, ENST00000406029_5end |
EntrezGene: | SEPT3 |
HGNC: | 10750 |
UniProt: | Q9UH03B1AHR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.03e-10 | 59 |
neural cell | 6.40e-10 | 25 |
neuronal stem cell | 1.79e-08 | 8 |
migratory neural crest cell | 4.58e-08 | 41 |
neuron | 8.67e-07 | 6 |
neuroblast | 8.67e-07 | 6 |
electrically signaling cell | 8.67e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.67e-07 | 22 |
germ cell cancer | 1.67e-07 | 22 |