FFCP PHASE1:Hg19::chr2:163099985..163099996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2191 | |EntrezGene=2191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3590 | |HGNC=3590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000463399_5end | |association_with_transcript=-5bp_to_ENST00000463399_5end | ||
|cluster_id=chr2:163099985..163099996,- | |||
|coexpression_cluster_id=C4137 | |||
|description=CAGE_peak_3_at_FAP_5end | |description=CAGE_peak_3_at_FAP_5end | ||
|id=chr2:163099985..163099996,- | |id=chr2:163099985..163099996,- | ||
|ontology_enrichment_celltype=CL:0000055!9.05e-43!180;CL:0000680!2.34e-24!57;CL:0000056!2.34e-24!57;CL:0000355!2.34e-24!57;CL:0000187!3.79e-22!54;CL:0000183!2.44e-19!59;CL:0000057!3.81e-19!75;CL:0000192!9.11e-19!42;CL:0000514!9.11e-19!42;CL:0000393!1.52e-18!60;CL:0000211!1.52e-18!60;CL:0000359!2.51e-16!32;CL:0002371!1.30e-12!591;CL:0000222!3.73e-12!119;CL:0000144!4.96e-12!625;CL:0000048!4.22e-11!430;CL:0000723!1.59e-10!436;CL:0000034!2.05e-09!444;CL:0002334!1.62e-08!12;CL:0000548!2.60e-08!679;CL:0000004!2.60e-08!679;CL:0000255!2.60e-08!679;CL:0000220!3.89e-08!246;CL:0000012!6.12e-08!682;CL:0002321!7.81e-08!248;CL:0002620!1.25e-07!23;CL:0002494!2.29e-07!16 | |ontology_enrichment_celltype=CL:0000055!9.05e-43!180;CL:0000680!2.34e-24!57;CL:0000056!2.34e-24!57;CL:0000355!2.34e-24!57;CL:0000187!3.79e-22!54;CL:0000183!2.44e-19!59;CL:0000057!3.81e-19!75;CL:0000192!9.11e-19!42;CL:0000514!9.11e-19!42;CL:0000393!1.52e-18!60;CL:0000211!1.52e-18!60;CL:0000359!2.51e-16!32;CL:0002371!1.30e-12!591;CL:0000222!3.73e-12!119;CL:0000144!4.96e-12!625;CL:0000048!4.22e-11!430;CL:0000723!1.59e-10!436;CL:0000034!2.05e-09!444;CL:0002334!1.62e-08!12;CL:0000548!2.60e-08!679;CL:0000004!2.60e-08!679;CL:0000255!2.60e-08!679;CL:0000220!3.89e-08!246;CL:0000012!6.12e-08!682;CL:0002321!7.81e-08!248;CL:0002620!1.25e-07!23;CL:0002494!2.29e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.85e-17;32!CL:0000192;1.09e-13;43!CL:0000187;1.39e-12;55!CL:0002334;4.89e-11;12!CL:0000134;3.39e-10;55!CL:0000723;8.59e-10;61!CL:0000393;1.59e-09;61!CL:0000211;1.59e-09;61!CL:0000048;1.89e-09;58!CL:0002494;1.14e-07;16!CL:0002539;1.81e-07;10!CL:0000057;3.57e-07;73!CL:0000034;3.79e-07;69!CL:0000680;4.77e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.95e-26,58;CL:0000056,9.95e-26,58;CL:0000355,9.95e-26,58;CL:0000187,6.78e-23,55;CL:0000192,6.67e-20,43;CL:0000514,6.67e-20,43;CL:0000048,2.94e-19,427;CL:0000393,3.15e-19,61;CL:0000211,3.15e-19,61;CL:0000723,2.14e-18,433;CL:0000359,1.85e-17,32;CL:0000034,2.74e-17,441;CL:0000057,6.72e-17,76;CL:0000222,2.96e-11,121;CL:0002334,3.29e-11,12;CL:0002494,1.11e-07,16;CL:0002539,2.28e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-13;43!CL:0000355;8.59e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!1.06e-10!14 | |ontology_enrichment_disease=DOID:2394!1.06e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.48e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.47e-23!83;UBERON:0002329!3.47e-23!83;UBERON:0003077!3.47e-23!83;UBERON:0003059!3.47e-23!83;UBERON:0007282!3.47e-23!83;UBERON:0009618!3.47e-23!83;UBERON:0007285!3.47e-23!83;UBERON:0004290!1.65e-21!70;UBERON:0001134!2.78e-21!61;UBERON:0002036!2.78e-21!61;UBERON:0003082!2.78e-21!61;UBERON:0002385!6.54e-20!63;UBERON:0001015!6.54e-20!63;UBERON:0000383!6.54e-20!63;UBERON:0000486!1.91e-19!82;UBERON:0005256!2.65e-13!143;UBERON:0001637!1.27e-11!42;UBERON:0003509!1.27e-11!42;UBERON:0004572!1.27e-11!42;UBERON:0004872!9.21e-11!84;UBERON:0004573!3.93e-10!33;UBERON:0004571!3.93e-10!33;UBERON:0000490!1.04e-09!138;UBERON:0002049!1.69e-09!79;UBERON:0007798!1.69e-09!79;UBERON:0004535!8.01e-09!110;UBERON:0002100!1.54e-08!216;UBERON:0001009!2.01e-08!113;UBERON:0000475!4.50e-08!365;UBERON:0003102!8.13e-08!95;UBERON:0001981!9.44e-08!60;UBERON:0007500!9.44e-08!60;UBERON:0004537!9.44e-08!60;UBERON:0006965!9.44e-08!60;UBERON:0002097!5.62e-07!40;UBERON:0001135!6.84e-07!15;UBERON:0000055!8.70e-07!69 | |ontology_enrichment_uberon=UBERON:0000914!3.47e-23!83;UBERON:0002329!3.47e-23!83;UBERON:0003077!3.47e-23!83;UBERON:0003059!3.47e-23!83;UBERON:0007282!3.47e-23!83;UBERON:0009618!3.47e-23!83;UBERON:0007285!3.47e-23!83;UBERON:0004290!1.65e-21!70;UBERON:0001134!2.78e-21!61;UBERON:0002036!2.78e-21!61;UBERON:0003082!2.78e-21!61;UBERON:0002385!6.54e-20!63;UBERON:0001015!6.54e-20!63;UBERON:0000383!6.54e-20!63;UBERON:0000486!1.91e-19!82;UBERON:0005256!2.65e-13!143;UBERON:0001637!1.27e-11!42;UBERON:0003509!1.27e-11!42;UBERON:0004572!1.27e-11!42;UBERON:0004872!9.21e-11!84;UBERON:0004573!3.93e-10!33;UBERON:0004571!3.93e-10!33;UBERON:0000490!1.04e-09!138;UBERON:0002049!1.69e-09!79;UBERON:0007798!1.69e-09!79;UBERON:0004535!8.01e-09!110;UBERON:0002100!1.54e-08!216;UBERON:0001009!2.01e-08!113;UBERON:0000475!4.50e-08!365;UBERON:0003102!8.13e-08!95;UBERON:0001981!9.44e-08!60;UBERON:0007500!9.44e-08!60;UBERON:0004537!9.44e-08!60;UBERON:0006965!9.44e-08!60;UBERON:0002097!5.62e-07!40;UBERON:0001135!6.84e-07!15;UBERON:0000055!8.70e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.63e-11;31!UBERON:0001015;8.63e-11;31!UBERON:0000383;8.63e-11;31!UBERON:0004573;4.05e-10;33!UBERON:0004571;4.05e-10;33!UBERON:0001637;3.36e-09;42!UBERON:0003509;3.36e-09;42!UBERON:0004572;3.36e-09;42!UBERON:0001135;1.46e-08;15!UBERON:0004237;1.81e-07;10!UBERON:0004695;1.81e-07;10!UBERON:0002111;1.81e-07;10!UBERON:0004178;1.81e-07;10!UBERON:0002118;4.06e-07;5!UBERON:0000947;4.82e-07;21!UBERON:0010191;4.82e-07;21!UBERON:0000992;5.35e-07;13 | |||
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| ||
|short_description=p3@FAP | |short_description=p3@FAP | ||
}} | }} |
Latest revision as of 21:43, 17 September 2015
Short description: | p3@FAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAP_5end |
Coexpression cluster: | C4137_Smooth_Fibroblast_Chondrocyte_Mesenchymal_Preadipocyte_mesenchymal_Ewing |
Association with transcript: | -5bp_to_ENST00000463399_5end |
EntrezGene: | FAP |
HGNC: | 3590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.95e-26 | 58 |
myoblast | 9.95e-26 | 58 |
multi-potent skeletal muscle stem cell | 9.95e-26 | 58 |
muscle cell | 6.78e-23 | 55 |
smooth muscle cell | 6.67e-20 | 43 |
smooth muscle myoblast | 6.67e-20 | 43 |
multi fate stem cell | 2.94e-19 | 427 |
electrically responsive cell | 3.15e-19 | 61 |
electrically active cell | 3.15e-19 | 61 |
somatic stem cell | 2.14e-18 | 433 |
vascular associated smooth muscle cell | 1.85e-17 | 32 |
stem cell | 2.74e-17 | 441 |
fibroblast | 6.72e-17 | 76 |
mesodermal cell | 2.96e-11 | 121 |
preadipocyte | 3.29e-11 | 12 |
cardiocyte | 1.11e-07 | 16 |
aortic smooth muscle cell | 2.28e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-14 | 14 |