FFCP PHASE1:Hg19::chr5:152870734..152870760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2890 | |EntrezGene=2890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |HGNC=4571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517469_5end | |association_with_transcript=0bp_to_ENST00000517469_5end | ||
|cluster_id=chr5:152870734..152870760,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_GRIA1_5end | |description=CAGE_peak_8_at_GRIA1_5end | ||
|id=chr5:152870734..152870760,+ | |id=chr5:152870734..152870760,+ | ||
|ontology_enrichment_celltype=CL:0000128!6.02e-14!7;CL:0000126!6.02e-14!7;CL:0000127!6.02e-14!7;CL:0002453!6.02e-14!7;CL:0002319!8.85e-11!25;CL:0000047!1.40e-09!8;CL:0002605!2.23e-09!3;CL:0000133!3.55e-09!59;CL:0000221!5.57e-08!71 | |ontology_enrichment_celltype=CL:0000128!6.02e-14!7;CL:0000126!6.02e-14!7;CL:0000127!6.02e-14!7;CL:0002453!6.02e-14!7;CL:0002319!8.85e-11!25;CL:0000047!1.40e-09!8;CL:0002605!2.23e-09!3;CL:0000133!3.55e-09!59;CL:0000221!5.57e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.05e-18;2!CL:0000540;6.99e-14;6!CL:0000404;6.99e-14;6!CL:0002319;2.46e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.57e-27,8;CL:0000540,7.00e-14,6;CL:0000031,7.00e-14,6;CL:0000404,7.00e-14,6;CL:0002319,2.46e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000031;6.99e-14;6!UBERON:0006215;2.67e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.71e-70!82;UBERON:0005743!9.02e-69!86;UBERON:0001049!4.12e-68!57;UBERON:0005068!4.12e-68!57;UBERON:0006241!4.12e-68!57;UBERON:0007135!4.12e-68!57;UBERON:0001893!2.49e-66!34;UBERON:0001869!2.57e-66!32;UBERON:0002616!1.83e-65!59;UBERON:0000073!5.54e-64!94;UBERON:0001016!5.54e-64!94;UBERON:0002791!9.28e-64!33;UBERON:0000955!7.39e-63!69;UBERON:0006238!7.39e-63!69;UBERON:0002020!1.11e-61!34;UBERON:0003528!1.11e-61!34;UBERON:0002780!1.31e-57!41;UBERON:0001890!1.31e-57!41;UBERON:0006240!1.31e-57!41;UBERON:0003080!4.68e-56!42;UBERON:0003075!2.08e-51!86;UBERON:0007284!2.08e-51!86;UBERON:0002346!1.28e-48!90;UBERON:0000956!1.31e-48!25;UBERON:0000203!1.31e-48!25;UBERON:0003056!5.26e-44!61;UBERON:0002619!5.36e-41!22;UBERON:0000033!1.08e-39!123;UBERON:0000153!2.73e-37!129;UBERON:0007811!2.73e-37!129;UBERON:0001950!8.96e-36!20;UBERON:0004121!7.11e-35!169;UBERON:0000924!9.09e-34!173;UBERON:0006601!9.09e-34!173;UBERON:0007023!1.17e-21!115;UBERON:0002420!2.08e-19!9;UBERON:0007245!2.08e-19!9;UBERON:0010009!2.08e-19!9;UBERON:0010011!2.08e-19!9;UBERON:0000454!2.08e-19!9;UBERON:0001871!2.74e-17!7;UBERON:0004733!7.66e-17!12;UBERON:0002028!7.66e-17!12;UBERON:0007277!7.66e-17!12;UBERON:0000025!2.03e-15!194;UBERON:0004732!2.08e-15!13;UBERON:0000349!5.51e-15!5;UBERON:0002308!2.55e-14!9;UBERON:0000125!2.55e-14!9;UBERON:0000064!3.63e-14!219;UBERON:0009663!3.87e-14!7;UBERON:0002680!4.19e-14!9;UBERON:0001895!4.19e-14!9;UBERON:0010092!4.19e-14!9;UBERON:0003076!4.07e-13!15;UBERON:0003057!4.07e-13!15;UBERON:0000369!4.54e-12!4;UBERON:0002435!4.54e-12!4;UBERON:0000204!4.54e-12!4;UBERON:0010082!4.54e-12!4;UBERON:0002037!8.97e-12!6;UBERON:0006215!8.97e-12!6;UBERON:0000200!1.18e-11!6;UBERON:0004111!2.36e-10!241;UBERON:0000475!4.01e-10!365;UBERON:0001872!1.34e-09!5;UBERON:0005383!1.38e-09!3;UBERON:0005382!1.38e-09!3;UBERON:0000483!2.91e-09!309;UBERON:0002021!3.22e-09!5;UBERON:0002771!3.49e-09!3;UBERON:0000119!4.59e-09!312;UBERON:0000477!2.27e-08!286;UBERON:0001876!4.17e-07!2;UBERON:0001954!4.55e-07!2;UBERON:0003022!4.55e-07!2;UBERON:0002421!4.55e-07!2;UBERON:0002600!4.55e-07!2;UBERON:0000481!4.71e-07!347;UBERON:0001873!5.91e-07!2;UBERON:0010122!5.91e-07!2 | |ontology_enrichment_uberon=UBERON:0001017!9.71e-70!82;UBERON:0005743!9.02e-69!86;UBERON:0001049!4.12e-68!57;UBERON:0005068!4.12e-68!57;UBERON:0006241!4.12e-68!57;UBERON:0007135!4.12e-68!57;UBERON:0001893!2.49e-66!34;UBERON:0001869!2.57e-66!32;UBERON:0002616!1.83e-65!59;UBERON:0000073!5.54e-64!94;UBERON:0001016!5.54e-64!94;UBERON:0002791!9.28e-64!33;UBERON:0000955!7.39e-63!69;UBERON:0006238!7.39e-63!69;UBERON:0002020!1.11e-61!34;UBERON:0003528!1.11e-61!34;UBERON:0002780!1.31e-57!41;UBERON:0001890!1.31e-57!41;UBERON:0006240!1.31e-57!41;UBERON:0003080!4.68e-56!42;UBERON:0003075!2.08e-51!86;UBERON:0007284!2.08e-51!86;UBERON:0002346!1.28e-48!90;UBERON:0000956!1.31e-48!25;UBERON:0000203!1.31e-48!25;UBERON:0003056!5.26e-44!61;UBERON:0002619!5.36e-41!22;UBERON:0000033!1.08e-39!123;UBERON:0000153!2.73e-37!129;UBERON:0007811!2.73e-37!129;UBERON:0001950!8.96e-36!20;UBERON:0004121!7.11e-35!169;UBERON:0000924!9.09e-34!173;UBERON:0006601!9.09e-34!173;UBERON:0007023!1.17e-21!115;UBERON:0002420!2.08e-19!9;UBERON:0007245!2.08e-19!9;UBERON:0010009!2.08e-19!9;UBERON:0010011!2.08e-19!9;UBERON:0000454!2.08e-19!9;UBERON:0001871!2.74e-17!7;UBERON:0004733!7.66e-17!12;UBERON:0002028!7.66e-17!12;UBERON:0007277!7.66e-17!12;UBERON:0000025!2.03e-15!194;UBERON:0004732!2.08e-15!13;UBERON:0000349!5.51e-15!5;UBERON:0002308!2.55e-14!9;UBERON:0000125!2.55e-14!9;UBERON:0000064!3.63e-14!219;UBERON:0009663!3.87e-14!7;UBERON:0002680!4.19e-14!9;UBERON:0001895!4.19e-14!9;UBERON:0010092!4.19e-14!9;UBERON:0003076!4.07e-13!15;UBERON:0003057!4.07e-13!15;UBERON:0000369!4.54e-12!4;UBERON:0002435!4.54e-12!4;UBERON:0000204!4.54e-12!4;UBERON:0010082!4.54e-12!4;UBERON:0002037!8.97e-12!6;UBERON:0006215!8.97e-12!6;UBERON:0000200!1.18e-11!6;UBERON:0004111!2.36e-10!241;UBERON:0000475!4.01e-10!365;UBERON:0001872!1.34e-09!5;UBERON:0005383!1.38e-09!3;UBERON:0005382!1.38e-09!3;UBERON:0000483!2.91e-09!309;UBERON:0002021!3.22e-09!5;UBERON:0002771!3.49e-09!3;UBERON:0000119!4.59e-09!312;UBERON:0000477!2.27e-08!286;UBERON:0001876!4.17e-07!2;UBERON:0001954!4.55e-07!2;UBERON:0003022!4.55e-07!2;UBERON:0002421!4.55e-07!2;UBERON:0002600!4.55e-07!2;UBERON:0000481!4.71e-07!347;UBERON:0001873!5.91e-07!2;UBERON:0010122!5.91e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.72e-33;32!UBERON:0001869;3.65e-32;32!UBERON:0000956;4.58e-32;25!UBERON:0000203;4.58e-32;25!UBERON:0003528;4.99e-30;34!UBERON:0002020;4.99e-30;34!UBERON:0002619;1.63e-29;22!UBERON:0001893;2.32e-28;34!UBERON:0000349;5.45e-28;5!UBERON:0000073;1.96e-22;53!UBERON:0002616;1.96e-22;53!UBERON:0002780;2.37e-22;41!UBERON:0001890;2.37e-22;41!UBERON:0001871;3.59e-20;6!UBERON:0001950;9.03e-20;20!UBERON:0001876;2.32e-18;2!UBERON:0001954;2.32e-18;2!UBERON:0003022;2.32e-18;2!UBERON:0002421;2.32e-18;2!UBERON:0002600;2.32e-18;2!UBERON:0000955;1.69e-17;68!UBERON:0001016;1.41e-16;83!UBERON:0001017;1.20e-15;75!UBERON:0002420;1.66e-15;9!UBERON:0007245;1.66e-15;9!UBERON:0010009;1.66e-15;9!UBERON:0010011;1.66e-15;9!UBERON:0000454;1.66e-15;9!UBERON:0005383;2.67e-12;3!UBERON:0005382;2.67e-12;3!UBERON:0002022;7.54e-10;1!UBERON:0001874;7.54e-10;1!UBERON:0000369;1.89e-09;4!UBERON:0002435;1.89e-09;4!UBERON:0000204;1.89e-09;4!UBERON:0004733;6.34e-07;12!UBERON:0002028;6.34e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.68e-43,81;UBERON:0001016,2.38e-38,89;UBERON:0002791,9.17e-36,32;UBERON:0001869,9.17e-36,32;UBERON:0003528,1.30e-33,34;UBERON:0002020,1.30e-33,34;UBERON:0001893,1.30e-33,34;UBERON:0000073,2.41e-33,53;UBERON:0002616,2.41e-33,53;UBERON:0000956,5.99e-32,25;UBERON:0000203,5.99e-32,25;UBERON:0001049,1.85e-31,56;UBERON:0005068,1.85e-31,56;UBERON:0006241,1.85e-31,56;UBERON:0007135,1.85e-31,56;UBERON:0002619,2.11e-29,22;UBERON:0000955,8.08e-29,68;UBERON:0006238,8.08e-29,68;UBERON:0000349,9.53e-28,5;UBERON:0002780,1.07e-27,41;UBERON:0001890,1.07e-27,41;UBERON:0003080,1.07e-27,41;UBERON:0006240,1.07e-27,41;UBERON:0003075,7.97e-21,82;UBERON:0007284,7.97e-21,82;UBERON:0001871,3.78e-20,6;UBERON:0002346,9.44e-20,86;UBERON:0001950,9.57e-20,20;UBERON:0004121,8.83e-19,171;UBERON:0000924,8.83e-19,171;UBERON:0006601,8.83e-19,171;UBERON:0001876,2.90e-18,2;UBERON:0001954,3.77e-18,2;UBERON:0003022,3.77e-18,2;UBERON:0002421,3.77e-18,2;UBERON:0002600,3.77e-18,2;UBERON:0003056,3.89e-18,61;UBERON:0010371,6.26e-16,104;UBERON:0002420,1.97e-15,9;UBERON:0007245,1.97e-15,9;UBERON:0010009,1.97e-15,9;UBERON:0010011,1.97e-15,9;UBERON:0000454,1.97e-15,9;UBERON:0011216,2.86e-15,223;UBERON:0005383,3.00e-12,3;UBERON:0005382,3.00e-12,3;UBERON:0010314,4.91e-12,132;UBERON:0002022,8.24e-10,1;UBERON:0001874,1.07e-09,1;UBERON:0000369,2.06e-09,4;UBERON:0002435,2.06e-09,4;UBERON:0000204,2.06e-09,4;UBERON:0010082,2.06e-09,4;UBERON:0000025,1.73e-07,192;UBERON:0007023,2.78e-07,114;UBERON:0004733,6.22e-07,12;UBERON:0002028,6.22e-07,12;UBERON:0007277,6.22e-07,12 | |||
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| ||
|short_description=p8@GRIA1 | |short_description=p8@GRIA1 | ||
}} | }} |
Latest revision as of 11:31, 16 September 2015
Short description: | p8@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRIA1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000517469_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.57e-27 | 8 |
neuron | 7.00e-14 | 6 |
neuroblast | 7.00e-14 | 6 |
electrically signaling cell | 7.00e-14 | 6 |
neural cell | 2.46e-11 | 25 |