FFCP PHASE1:Hg19::chrX:65259914..65259937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11326 | |EntrezGene=11326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17032 | |HGNC=17032 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y279 | |UniProt=Q9Y279 | ||
|association_with_transcript=11bp_to_ENST00000374737_5end | |association_with_transcript=11bp_to_ENST00000374737_5end | ||
|cluster_id=chrX:65259914..65259937,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_VSIG4_5end | |description=CAGE_peak_1_at_VSIG4_5end | ||
|id=chrX:65259914..65259937,- | |id=chrX:65259914..65259937,- | ||
|ontology_enrichment_celltype=CL:0002194!2.76e-20!63;CL:0000576!2.76e-20!63;CL:0000040!2.76e-20!63;CL:0000559!2.76e-20!63;CL:0000557!5.31e-20!71;CL:0002009!5.55e-20!65;CL:0002057!3.07e-19!42;CL:0000839!6.87e-19!70;CL:0000766!1.80e-18!76;CL:0000860!4.53e-17!45;CL:0000763!1.17e-13!112;CL:0000049!1.17e-13!112;CL:0002087!3.49e-08!119;CL:0000738!1.65e-07!140;CL:0002031!1.96e-07!124;CL:0000037!9.07e-07!172;CL:0000566!9.07e-07!172 | |ontology_enrichment_celltype=CL:0002194!2.76e-20!63;CL:0000576!2.76e-20!63;CL:0000040!2.76e-20!63;CL:0000559!2.76e-20!63;CL:0000557!5.31e-20!71;CL:0002009!5.55e-20!65;CL:0002057!3.07e-19!42;CL:0000839!6.87e-19!70;CL:0000766!1.80e-18!76;CL:0000860!4.53e-17!45;CL:0000763!1.17e-13!112;CL:0000049!1.17e-13!112;CL:0002087!3.49e-08!119;CL:0000738!1.65e-07!140;CL:0002031!1.96e-07!124;CL:0000037!9.07e-07!172;CL:0000566!9.07e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.15e-19;39!CL:0000234;1.15e-19;39!CL:0000860;3.45e-17;33!CL:0002057;3.45e-17;33!CL:0000576;6.60e-14;48!CL:0000766;1.55e-09;69!CL:0000235;2.00e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.76e-25,48;CL:0000234,3.76e-25,48;CL:0002194,1.13e-21,59;CL:0000576,1.13e-21,59;CL:0000040,1.13e-21,59;CL:0000559,1.13e-21,59;CL:0002009,1.81e-20,61;CL:0000860,4.53e-19,42;CL:0002057,4.53e-19,42;CL:0000557,6.02e-19,67;CL:0000839,1.28e-18,66;CL:0000766,2.58e-18,72;CL:0000763,6.26e-11,108;CL:0000049,6.26e-11,108;CL:0000235,2.00e-08,6;CL:0002087,2.90e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-14;42!UBERON:0006601;4.13e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-78!115;UBERON:0001049!3.17e-29!57;UBERON:0005068!3.17e-29!57;UBERON:0006241!3.17e-29!57;UBERON:0007135!3.17e-29!57;UBERON:0003080!2.25e-24!42;UBERON:0002780!1.89e-23!41;UBERON:0001890!1.89e-23!41;UBERON:0006240!1.89e-23!41;UBERON:0002616!2.37e-23!59;UBERON:0001017!2.76e-21!82;UBERON:0005743!1.68e-20!86;UBERON:0000955!3.45e-20!69;UBERON:0006238!3.45e-20!69;UBERON:0003075!6.35e-20!86;UBERON:0007284!6.35e-20!86;UBERON:0002390!8.15e-20!102;UBERON:0003061!8.15e-20!102;UBERON:0001893!8.17e-19!34;UBERON:0002020!8.54e-19!34;UBERON:0003528!8.54e-19!34;UBERON:0002791!3.00e-18!33;UBERON:0002346!3.75e-18!90;UBERON:0002193!6.95e-18!112;UBERON:0000073!1.62e-17!94;UBERON:0001016!1.62e-17!94;UBERON:0001869!3.09e-17!32;UBERON:0002371!8.97e-16!80;UBERON:0002619!2.27e-15!22;UBERON:0003056!3.09e-14!61;UBERON:0001950!8.37e-14!20;UBERON:0000062!1.04e-13!511;UBERON:0001474!1.66e-13!86;UBERON:0002405!1.95e-13!115;UBERON:0000956!1.17e-12!25;UBERON:0000203!1.17e-12!25;UBERON:0004765!2.57e-10!101;UBERON:0001434!2.57e-10!101;UBERON:0000467!6.65e-10!625;UBERON:0000480!8.49e-10!626;UBERON:0000153!9.97e-10!129;UBERON:0007811!9.97e-10!129;UBERON:0000479!1.73e-09!787;UBERON:0000922!3.31e-09!612;UBERON:0002050!4.51e-09!605;UBERON:0005423!4.51e-09!605;UBERON:0000033!7.65e-09!123;UBERON:0000468!9.11e-09!659;UBERON:0000923!9.48e-09!604;UBERON:0005291!9.48e-09!604;UBERON:0006598!9.48e-09!604;UBERON:0002532!9.48e-09!604;UBERON:0002420!3.43e-08!9;UBERON:0007245!3.43e-08!9;UBERON:0010009!3.43e-08!9;UBERON:0010011!3.43e-08!9;UBERON:0000454!3.43e-08!9;UBERON:0002308!7.90e-08!9;UBERON:0000125!7.90e-08!9;UBERON:0002298!1.47e-07!8;UBERON:0004121!1.79e-07!169;UBERON:0000924!6.65e-07!173;UBERON:0006601!6.65e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!1.33e-78!115;UBERON:0001049!3.17e-29!57;UBERON:0005068!3.17e-29!57;UBERON:0006241!3.17e-29!57;UBERON:0007135!3.17e-29!57;UBERON:0003080!2.25e-24!42;UBERON:0002780!1.89e-23!41;UBERON:0001890!1.89e-23!41;UBERON:0006240!1.89e-23!41;UBERON:0002616!2.37e-23!59;UBERON:0001017!2.76e-21!82;UBERON:0005743!1.68e-20!86;UBERON:0000955!3.45e-20!69;UBERON:0006238!3.45e-20!69;UBERON:0003075!6.35e-20!86;UBERON:0007284!6.35e-20!86;UBERON:0002390!8.15e-20!102;UBERON:0003061!8.15e-20!102;UBERON:0001893!8.17e-19!34;UBERON:0002020!8.54e-19!34;UBERON:0003528!8.54e-19!34;UBERON:0002791!3.00e-18!33;UBERON:0002346!3.75e-18!90;UBERON:0002193!6.95e-18!112;UBERON:0000073!1.62e-17!94;UBERON:0001016!1.62e-17!94;UBERON:0001869!3.09e-17!32;UBERON:0002371!8.97e-16!80;UBERON:0002619!2.27e-15!22;UBERON:0003056!3.09e-14!61;UBERON:0001950!8.37e-14!20;UBERON:0000062!1.04e-13!511;UBERON:0001474!1.66e-13!86;UBERON:0002405!1.95e-13!115;UBERON:0000956!1.17e-12!25;UBERON:0000203!1.17e-12!25;UBERON:0004765!2.57e-10!101;UBERON:0001434!2.57e-10!101;UBERON:0000467!6.65e-10!625;UBERON:0000480!8.49e-10!626;UBERON:0000153!9.97e-10!129;UBERON:0007811!9.97e-10!129;UBERON:0000479!1.73e-09!787;UBERON:0000922!3.31e-09!612;UBERON:0002050!4.51e-09!605;UBERON:0005423!4.51e-09!605;UBERON:0000033!7.65e-09!123;UBERON:0000468!9.11e-09!659;UBERON:0000923!9.48e-09!604;UBERON:0005291!9.48e-09!604;UBERON:0006598!9.48e-09!604;UBERON:0002532!9.48e-09!604;UBERON:0002420!3.43e-08!9;UBERON:0007245!3.43e-08!9;UBERON:0010009!3.43e-08!9;UBERON:0010011!3.43e-08!9;UBERON:0000454!3.43e-08!9;UBERON:0002308!7.90e-08!9;UBERON:0000125!7.90e-08!9;UBERON:0002298!1.47e-07!8;UBERON:0004121!1.79e-07!169;UBERON:0000924!6.65e-07!173;UBERON:0006601!6.65e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.19e-20;114!UBERON:0002780;4.75e-19;41!UBERON:0001890;4.75e-19;41!UBERON:0003528;2.13e-17;34!UBERON:0002020;2.13e-17;34!UBERON:0001893;2.21e-17;34!UBERON:0002791;2.70e-17;32!UBERON:0000073;3.67e-17;53!UBERON:0002616;3.67e-17;53!UBERON:0001869;5.66e-17;32!UBERON:0002619;9.93e-17;22!UBERON:0001950;5.24e-15;20!UBERON:0000956;6.52e-14;25!UBERON:0000203;6.52e-14;25!UBERON:0000955;2.16e-10;68!UBERON:0001017;3.51e-10;75!UBERON:0002420;7.14e-09;9!UBERON:0007245;7.14e-09;9!UBERON:0010009;7.14e-09;9!UBERON:0010011;7.14e-09;9!UBERON:0000454;7.14e-09;9!UBERON:0001016;8.03e-09;83!UBERON:0000125;1.79e-08;9!UBERON:0002308;1.79e-08;9!UBERON:0009663;4.04e-07;7 | |||
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|short_description=p1@VSIG4 | |short_description=p1@VSIG4 | ||
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Latest revision as of 04:53, 16 September 2015
Short description: | p1@VSIG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSIG4_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 11bp_to_ENST00000374737_5end |
EntrezGene: | VSIG4 |
HGNC: | 17032 |
UniProt: | Q9Y279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.76e-25 | 48 |
phagocyte | 3.76e-25 | 48 |
monopoietic cell | 1.13e-21 | 59 |
monocyte | 1.13e-21 | 59 |
monoblast | 1.13e-21 | 59 |
promonocyte | 1.13e-21 | 59 |
macrophage dendritic cell progenitor | 1.81e-20 | 61 |
classical monocyte | 4.53e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.53e-19 | 42 |
granulocyte monocyte progenitor cell | 6.02e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.28e-18 | 66 |
myeloid leukocyte | 2.58e-18 | 72 |
myeloid cell | 6.26e-11 | 108 |
common myeloid progenitor | 6.26e-11 | 108 |
macrophage | 2.00e-08 | 6 |
nongranular leukocyte | 2.90e-07 | 115 |