FFCP PHASE1:Hg19::chr19:54412517..54412583,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:54412517..54412583,+
|short_description=p1@CACNG7
|description=CAGE_peak_1_at_CACNG7_5end
|association_with_transcript=-5bp_to_ENST00000391767,ENST0000046...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59284 | |EntrezGene=59284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13626 | |HGNC=13626 | ||
|TSSclassifier=strong | |||
|UniProt=P62955 | |UniProt=P62955 | ||
|association_with_transcript=-5bp_to_ENST00000391767,ENST00000468076_5end | |||
|cluster_id=chr19:54412517..54412583,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CACNG7_5end | |||
|id=chr19:54412517..54412583,+ | |||
|ontology_enrichment_celltype=CL:0000393!7.19e-24!60;CL:0000211!7.19e-24!60;CL:0000055!9.91e-24!180;CL:0000183!1.56e-21!59;CL:0000192!1.29e-20!42;CL:0000514!1.29e-20!42;CL:0000187!3.39e-20!54;CL:0000680!3.73e-18!57;CL:0000056!3.73e-18!57;CL:0000355!3.73e-18!57;CL:0000359!2.06e-17!32;CL:0002494!2.86e-10!16;CL:0000222!2.68e-08!119;CL:0002539!2.77e-08!10;CL:0002319!2.30e-07!25;CL:0000133!7.69e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.65e-20;32!CL:0000192;8.80e-16;43!CL:0002494;5.86e-13;16!CL:0000393;2.72e-12;61!CL:0000211;2.72e-12;61!CL:0000187;1.60e-10;55!CL:0002539;2.48e-10;10!CL:0002319;5.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.26e-24,61;CL:0000211,1.26e-24,61;CL:0000192,6.04e-22,43;CL:0000514,6.04e-22,43;CL:0000359,8.94e-22,32;CL:0000187,4.10e-20,55;CL:0000680,2.29e-18,58;CL:0000056,2.29e-18,58;CL:0000355,2.29e-18,58;CL:0002494,5.51e-13,16;CL:0002539,2.20e-10,10;CL:0000047,5.55e-08,8;CL:0000222,4.21e-07,121;CL:0000133,4.73e-07,59;CL:0002319,6.31e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000514;8.80e-16;43!CL:0000355;4.49e-10;58!UBERON:0006601;8.77e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.26e-44!94;UBERON:0001016!2.26e-44!94;UBERON:0005743!1.08e-42!86;UBERON:0001017!1.09e-42!82;UBERON:0001049!1.07e-38!57;UBERON:0005068!1.07e-38!57;UBERON:0006241!1.07e-38!57;UBERON:0007135!1.07e-38!57;UBERON:0000025!6.08e-38!194;UBERON:0003075!1.14e-35!86;UBERON:0007284!1.14e-35!86;UBERON:0002346!4.13e-35!90;UBERON:0000955!3.19e-34!69;UBERON:0006238!3.19e-34!69;UBERON:0002616!1.61e-33!59;UBERON:0000483!1.57e-29!309;UBERON:0002780!3.50e-29!41;UBERON:0001890!3.50e-29!41;UBERON:0006240!3.50e-29!41;UBERON:0000119!1.14e-28!312;UBERON:0004111!4.10e-28!241;UBERON:0003080!4.86e-28!42;UBERON:0003056!6.56e-28!61;UBERON:0001893!3.64e-27!34;UBERON:0002020!7.35e-27!34;UBERON:0003528!7.35e-27!34;UBERON:0002791!3.02e-26!33;UBERON:0001869!1.14e-25!32;UBERON:0000924!3.33e-23!173;UBERON:0006601!3.33e-23!173;UBERON:0004121!4.18e-23!169;UBERON:0000477!1.39e-22!286;UBERON:0000033!1.56e-22!123;UBERON:0001637!3.76e-22!42;UBERON:0003509!3.76e-22!42;UBERON:0004572!3.76e-22!42;UBERON:0000475!1.48e-21!365;UBERON:0000956!4.22e-20!25;UBERON:0000203!4.22e-20!25;UBERON:0000153!4.50e-20!129;UBERON:0007811!4.50e-20!129;UBERON:0004872!1.45e-19!84;UBERON:0002619!4.94e-19!22;UBERON:0004573!2.90e-18!33;UBERON:0004571!2.90e-18!33;UBERON:0001981!1.05e-17!60;UBERON:0007500!1.05e-17!60;UBERON:0004537!1.05e-17!60;UBERON:0006965!1.05e-17!60;UBERON:0001950!2.13e-17!20;UBERON:0000481!8.20e-16!347;UBERON:0002049!8.40e-16!79;UBERON:0007798!8.40e-16!79;UBERON:0001134!8.72e-16!61;UBERON:0002036!8.72e-16!61;UBERON:0003082!8.72e-16!61;UBERON:0000055!2.42e-15!69;UBERON:0002385!2.58e-15!63;UBERON:0001015!2.58e-15!63;UBERON:0000383!2.58e-15!63;UBERON:0000922!5.18e-15!612;UBERON:0004535!2.27e-14!110;UBERON:0004290!4.09e-14!70;UBERON:0000468!8.42e-14!659;UBERON:0001009!2.24e-13!113;UBERON:0000923!7.19e-13!604;UBERON:0005291!7.19e-13!604;UBERON:0006598!7.19e-13!604;UBERON:0002532!7.19e-13!604;UBERON:0003914!8.21e-13!118;UBERON:0002050!9.96e-13!605;UBERON:0005423!9.96e-13!605;UBERON:0000467!1.82e-12!625;UBERON:0000480!2.50e-12!626;UBERON:0000914!3.26e-12!83;UBERON:0002329!3.26e-12!83;UBERON:0003077!3.26e-12!83;UBERON:0003059!3.26e-12!83;UBERON:0007282!3.26e-12!83;UBERON:0009618!3.26e-12!83;UBERON:0007285!3.26e-12!83;UBERON:0003076!1.36e-11!15;UBERON:0003057!1.36e-11!15;UBERON:0000947!1.27e-10!21;UBERON:0010191!1.27e-10!21;UBERON:0004732!2.78e-10!13;UBERON:0004733!1.20e-09!12;UBERON:0002028!1.20e-09!12;UBERON:0007277!1.20e-09!12;UBERON:0000486!1.36e-09!82;UBERON:0007023!2.57e-09!115;UBERON:0000490!8.49e-09!138;UBERON:0002420!1.49e-08!9;UBERON:0007245!1.49e-08!9;UBERON:0010009!1.49e-08!9;UBERON:0010011!1.49e-08!9;UBERON:0000454!1.49e-08!9;UBERON:0004237!2.77e-08!10;UBERON:0004695!2.77e-08!10;UBERON:0002111!2.77e-08!10;UBERON:0004178!2.77e-08!10;UBERON:0002308!3.52e-08!9;UBERON:0000125!3.52e-08!9;UBERON:0001135!6.19e-08!15;UBERON:0002680!1.14e-07!9;UBERON:0001895!1.14e-07!9;UBERON:0010092!1.14e-07!9;UBERON:0000948!6.12e-07!24;UBERON:0005498!6.12e-07!24;UBERON:0004140!6.12e-07!24;UBERON:0009881!6.12e-07!24;UBERON:0004141!6.12e-07!24;UBERON:0003084!6.12e-07!24;UBERON:0007005!6.12e-07!24;UBERON:0004139!6.12e-07!24;UBERON:0004291!6.12e-07!24;UBERON:0009663!8.76e-07!7;UBERON:0000200!9.00e-07!6 | |||
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| ||
|short_description=p1@CACNG7 | |||
}} | }} |
Latest revision as of 20:30, 19 September 2015
Short description: | p1@CACNG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNG7_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000391767, ENST00000468076_5end |
EntrezGene: | CACNG7 |
HGNC: | 13626 |
UniProt: | P62955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.26e-24 | 61 |
electrically active cell | 1.26e-24 | 61 |
smooth muscle cell | 6.04e-22 | 43 |
smooth muscle myoblast | 6.04e-22 | 43 |
vascular associated smooth muscle cell | 8.94e-22 | 32 |
muscle cell | 4.10e-20 | 55 |
muscle precursor cell | 2.29e-18 | 58 |
myoblast | 2.29e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.29e-18 | 58 |
cardiocyte | 5.51e-13 | 16 |
aortic smooth muscle cell | 2.20e-10 | 10 |
neuronal stem cell | 5.55e-08 | 8 |
mesodermal cell | 4.21e-07 | 121 |
neurectodermal cell | 4.73e-07 | 59 |
neural cell | 6.31e-07 | 25 |