FFCP PHASE1:Hg19::chr15:42696992..42697017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=15bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |association_with_transcript=15bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | ||
|cluster_id=chr15:42696992..42697017,+ | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_3_at_CAPN3_5end | |description=CAGE_peak_3_at_CAPN3_5end | ||
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|ontology_enrichment_celltype=CL:0000148!1.72e-19!10;CL:0000541!1.72e-19!10;CL:0000147!6.06e-16!14;CL:0002274!5.65e-09!5;CL:0000457!5.65e-09!5;CL:0002191!5.65e-09!5;CL:0000097!5.65e-09!5;CL:0000831!5.65e-09!5;CL:0002028!5.65e-09!5;CL:0000710!1.57e-08!20;CL:0002567!1.41e-07!3 | |ontology_enrichment_celltype=CL:0000148!1.72e-19!10;CL:0000541!1.72e-19!10;CL:0000147!6.06e-16!14;CL:0002274!5.65e-09!5;CL:0000457!5.65e-09!5;CL:0002191!5.65e-09!5;CL:0000097!5.65e-09!5;CL:0000831!5.65e-09!5;CL:0002028!5.65e-09!5;CL:0000710!1.57e-08!20;CL:0002567!1.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.12e-17;10!CL:0000147;3.63e-15;14!CL:0002567;8.69e-10;3!CL:0000710;4.50e-08;20 | |ontology_enrichment_celltype_v019=CL:0000148;1.12e-17;10!CL:0000147;3.63e-15;14!CL:0002567;8.69e-10;3!CL:0000710;4.50e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.10e-17,10;CL:0000541,1.10e-17,10;CL:0000147,3.60e-15,14;CL:0002567,8.69e-10,3;CL:0000710,4.46e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.19e-18;82!UBERON:0006241;2.20e-09;3!UBERON:0003057;2.20e-09;3!UBERON:0006215;3.10e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;2.19e-18;82!UBERON:0006241;2.20e-09;3!UBERON:0003057;2.20e-09;3!UBERON:0006215;3.10e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.89e-63!57;UBERON:0005068!8.89e-63!57;UBERON:0006241!8.89e-63!57;UBERON:0007135!8.89e-63!57;UBERON:0007023!4.66e-56!115;UBERON:0002616!2.82e-51!59;UBERON:0005743!1.11e-50!86;UBERON:0001017!2.65e-49!82;UBERON:0003075!7.28e-47!86;UBERON:0007284!7.28e-47!86;UBERON:0000073!1.03e-46!94;UBERON:0001016!1.03e-46!94;UBERON:0002780!2.73e-46!41;UBERON:0001890!2.73e-46!41;UBERON:0006240!2.73e-46!41;UBERON:0000955!5.76e-46!69;UBERON:0006238!5.76e-46!69;UBERON:0003080!5.85e-45!42;UBERON:0002346!4.08e-44!90;UBERON:0001893!2.21e-40!34;UBERON:0002020!2.51e-40!34;UBERON:0003528!2.51e-40!34;UBERON:0002791!1.39e-38!33;UBERON:0001869!1.67e-36!32;UBERON:0003056!7.55e-32!61;UBERON:0002619!2.10e-28!22;UBERON:0000033!3.58e-25!123;UBERON:0001950!5.97e-25!20;UBERON:0004121!1.08e-24!169;UBERON:0000153!1.61e-24!129;UBERON:0007811!1.61e-24!129;UBERON:0000956!1.92e-24!25;UBERON:0000203!1.92e-24!25;UBERON:0000924!9.35e-24!173;UBERON:0006601!9.35e-24!173;UBERON:0002308!2.28e-18!9;UBERON:0000125!2.28e-18!9;UBERON:0003076!3.07e-18!15;UBERON:0003057!3.07e-18!15;UBERON:0002420!7.32e-18!9;UBERON:0007245!7.32e-18!9;UBERON:0010009!7.32e-18!9;UBERON:0010011!7.32e-18!9;UBERON:0000454!7.32e-18!9;UBERON:0000025!6.44e-15!194;UBERON:0004732!7.80e-15!13;UBERON:0009663!1.54e-14!7;UBERON:0002298!3.46e-13!8;UBERON:0004733!5.54e-13!12;UBERON:0002028!5.54e-13!12;UBERON:0007277!5.54e-13!12;UBERON:0000200!3.42e-12!6;UBERON:0004111!1.83e-10!241;UBERON:0000349!2.26e-10!5;UBERON:0000483!9.92e-10!309;UBERON:0000119!1.73e-09!312;UBERON:0001871!7.47e-09!7;UBERON:0000369!1.31e-08!4;UBERON:0002435!1.31e-08!4;UBERON:0000204!1.31e-08!4;UBERON:0010082!1.31e-08!4;UBERON:0000064!4.04e-08!219;UBERON:0002680!7.50e-08!9;UBERON:0001895!7.50e-08!9;UBERON:0010092!7.50e-08!9;UBERON:0000475!9.71e-08!365;UBERON:0006331!1.70e-07!3;UBERON:0000988!1.78e-07!3;UBERON:0001896!1.78e-07!3;UBERON:0005290!1.78e-07!3;UBERON:0010096!1.78e-07!3;UBERON:0001894!2.66e-07!7;UBERON:0006222!2.66e-07!7;UBERON:0000477!2.74e-07!286;UBERON:0002240!2.81e-07!3;UBERON:0001872!3.20e-07!5;UBERON:0002021!3.81e-07!5;UBERON:0000062!5.49e-07!511;UBERON:0002771!7.16e-07!3;UBERON:0005383!8.92e-07!3;UBERON:0005382!8.92e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.89e-63!57;UBERON:0005068!8.89e-63!57;UBERON:0006241!8.89e-63!57;UBERON:0007135!8.89e-63!57;UBERON:0007023!4.66e-56!115;UBERON:0002616!2.82e-51!59;UBERON:0005743!1.11e-50!86;UBERON:0001017!2.65e-49!82;UBERON:0003075!7.28e-47!86;UBERON:0007284!7.28e-47!86;UBERON:0000073!1.03e-46!94;UBERON:0001016!1.03e-46!94;UBERON:0002780!2.73e-46!41;UBERON:0001890!2.73e-46!41;UBERON:0006240!2.73e-46!41;UBERON:0000955!5.76e-46!69;UBERON:0006238!5.76e-46!69;UBERON:0003080!5.85e-45!42;UBERON:0002346!4.08e-44!90;UBERON:0001893!2.21e-40!34;UBERON:0002020!2.51e-40!34;UBERON:0003528!2.51e-40!34;UBERON:0002791!1.39e-38!33;UBERON:0001869!1.67e-36!32;UBERON:0003056!7.55e-32!61;UBERON:0002619!2.10e-28!22;UBERON:0000033!3.58e-25!123;UBERON:0001950!5.97e-25!20;UBERON:0004121!1.08e-24!169;UBERON:0000153!1.61e-24!129;UBERON:0007811!1.61e-24!129;UBERON:0000956!1.92e-24!25;UBERON:0000203!1.92e-24!25;UBERON:0000924!9.35e-24!173;UBERON:0006601!9.35e-24!173;UBERON:0002308!2.28e-18!9;UBERON:0000125!2.28e-18!9;UBERON:0003076!3.07e-18!15;UBERON:0003057!3.07e-18!15;UBERON:0002420!7.32e-18!9;UBERON:0007245!7.32e-18!9;UBERON:0010009!7.32e-18!9;UBERON:0010011!7.32e-18!9;UBERON:0000454!7.32e-18!9;UBERON:0000025!6.44e-15!194;UBERON:0004732!7.80e-15!13;UBERON:0009663!1.54e-14!7;UBERON:0002298!3.46e-13!8;UBERON:0004733!5.54e-13!12;UBERON:0002028!5.54e-13!12;UBERON:0007277!5.54e-13!12;UBERON:0000200!3.42e-12!6;UBERON:0004111!1.83e-10!241;UBERON:0000349!2.26e-10!5;UBERON:0000483!9.92e-10!309;UBERON:0000119!1.73e-09!312;UBERON:0001871!7.47e-09!7;UBERON:0000369!1.31e-08!4;UBERON:0002435!1.31e-08!4;UBERON:0000204!1.31e-08!4;UBERON:0010082!1.31e-08!4;UBERON:0000064!4.04e-08!219;UBERON:0002680!7.50e-08!9;UBERON:0001895!7.50e-08!9;UBERON:0010092!7.50e-08!9;UBERON:0000475!9.71e-08!365;UBERON:0006331!1.70e-07!3;UBERON:0000988!1.78e-07!3;UBERON:0001896!1.78e-07!3;UBERON:0005290!1.78e-07!3;UBERON:0010096!1.78e-07!3;UBERON:0001894!2.66e-07!7;UBERON:0006222!2.66e-07!7;UBERON:0000477!2.74e-07!286;UBERON:0002240!2.81e-07!3;UBERON:0001872!3.20e-07!5;UBERON:0002021!3.81e-07!5;UBERON:0000062!5.49e-07!511;UBERON:0002771!7.16e-07!3;UBERON:0005383!8.92e-07!3;UBERON:0005382!8.92e-07!3 | ||
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| ||
|short_description=p3@CAPN3 | |short_description=p3@CAPN3 | ||
}} | }} |
Latest revision as of 16:02, 17 September 2015
Short description: | p3@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN3_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 15bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.10e-17 | 10 |
melanoblast | 1.10e-17 | 10 |
pigment cell | 3.60e-15 | 14 |
light melanocyte | 8.69e-10 | 3 |
neurecto-epithelial cell | 4.46e-08 | 20 |