FFCP PHASE1:Hg19::chr17:8063738..8063750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |UniProt=Q69Z01 | ||
|association_with_transcript=196bp_to_AL050223_5end | |association_with_transcript=196bp_to_AL050223_5end | ||
|cluster_id=chr17:8063738..8063750,- | |||
|coexpression_cluster_id=C1049 | |coexpression_cluster_id=C1049 | ||
|description=CAGE_peak_12_at_VAMP2_5end | |description=CAGE_peak_12_at_VAMP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.52e-10;3 | |ontology_enrichment_celltype_v019=CL:0000775;4.52e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.17e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.21e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p12@VAMP2 | |short_description=p12@VAMP2 | ||
}} | }} |
Latest revision as of 13:27, 18 September 2015
Short description: | p12@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_VAMP2_5end |
Coexpression cluster: | C1049_pineal_medial_hippocampus_middle_occipital_amygdala_parietal |
Association with transcript: | 196bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.17e-10 | 3 |