FFCP PHASE1:Hg19::chr15:42697040..42697052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=63bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |association_with_transcript=63bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | ||
|cluster_id=chr15:42697040..42697052,+ | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_4_at_CAPN3_5end | |description=CAGE_peak_4_at_CAPN3_5end | ||
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|ontology_enrichment_celltype=CL:0000148!2.72e-14!10;CL:0000541!2.72e-14!10;CL:0000147!4.19e-12!14;CL:0002567!2.41e-08!3 | |ontology_enrichment_celltype=CL:0000148!2.72e-14!10;CL:0000541!2.72e-14!10;CL:0000147!4.19e-12!14;CL:0002567!2.41e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.59e-15;10!CL:0000147;1.22e-13;14!CL:0002567;5.91e-11;3!CL:0000710;3.58e-07;20 | |ontology_enrichment_celltype_v019=CL:0000148;1.59e-15;10!CL:0000147;1.22e-13;14!CL:0002567;5.91e-11;3!CL:0000710;3.58e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.62e-15,10;CL:0000541,1.62e-15,10;CL:0000147,1.22e-13,14;CL:0002567,6.01e-11,3;CL:0000710,3.62e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.71e-21;82!UBERON:0006215;5.23e-09;3!UBERON:0010122;9.58e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;3.71e-21;82!UBERON:0006215;5.23e-09;3!UBERON:0010122;9.58e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;4.45e-07;2 | |ontology_enrichment_disease_v019=DOID:1909;4.45e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,4.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.56e-71!57;UBERON:0005068!4.56e-71!57;UBERON:0006241!4.56e-71!57;UBERON:0007135!4.56e-71!57;UBERON:0002616!1.40e-58!59;UBERON:0005743!9.44e-58!86;UBERON:0001017!3.09e-56!82;UBERON:0007023!5.77e-56!115;UBERON:0000073!2.10e-53!94;UBERON:0001016!2.10e-53!94;UBERON:0002780!2.75e-53!41;UBERON:0001890!2.75e-53!41;UBERON:0006240!2.75e-53!41;UBERON:0000955!9.60e-53!69;UBERON:0006238!9.60e-53!69;UBERON:0003080!8.58e-52!42;UBERON:0003075!3.04e-51!86;UBERON:0007284!3.04e-51!86;UBERON:0002346!2.51e-48!90;UBERON:0001893!9.04e-47!34;UBERON:0002020!9.37e-47!34;UBERON:0003528!9.37e-47!34;UBERON:0002791!8.35e-45!33;UBERON:0001869!1.65e-42!32;UBERON:0003056!4.98e-37!61;UBERON:0002619!7.39e-34!22;UBERON:0000033!1.42e-32!123;UBERON:0004121!8.83e-32!169;UBERON:0000924!1.13e-30!173;UBERON:0006601!1.13e-30!173;UBERON:0000153!2.12e-30!129;UBERON:0007811!2.12e-30!129;UBERON:0001950!3.87e-30!20;UBERON:0000956!3.04e-29!25;UBERON:0000203!3.04e-29!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0003076!1.71e-19!15;UBERON:0003057!1.71e-19!15;UBERON:0002420!3.39e-19!9;UBERON:0007245!3.39e-19!9;UBERON:0010009!3.39e-19!9;UBERON:0010011!3.39e-19!9;UBERON:0000454!3.39e-19!9;UBERON:0000025!2.11e-17!194;UBERON:0004732!5.18e-16!13;UBERON:0009663!1.49e-15!7;UBERON:0002298!4.32e-14!8;UBERON:0004733!5.38e-14!12;UBERON:0002028!5.38e-14!12;UBERON:0007277!5.38e-14!12;UBERON:0004111!2.34e-13!241;UBERON:0000200!5.18e-13!6;UBERON:0000483!1.20e-12!309;UBERON:0001871!1.46e-12!7;UBERON:0000119!2.27e-12!312;UBERON:0000349!5.17e-11!5;UBERON:0000477!1.03e-09!286;UBERON:0000475!1.74e-09!365;UBERON:0000064!3.21e-09!219;UBERON:0000369!4.22e-09!4;UBERON:0002435!4.22e-09!4;UBERON:0000204!4.22e-09!4;UBERON:0010082!4.22e-09!4;UBERON:0002680!1.58e-08!9;UBERON:0001895!1.58e-08!9;UBERON:0010092!1.58e-08!9;UBERON:0006331!5.16e-08!3;UBERON:0000988!5.40e-08!3;UBERON:0001894!6.37e-08!7;UBERON:0006222!6.37e-08!7;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3;UBERON:0001872!9.66e-08!5;UBERON:0002021!1.59e-07!5;UBERON:0002240!1.72e-07!3;UBERON:0002771!3.29e-07!3;UBERON:0005383!3.82e-07!3;UBERON:0005382!3.82e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!4.56e-71!57;UBERON:0005068!4.56e-71!57;UBERON:0006241!4.56e-71!57;UBERON:0007135!4.56e-71!57;UBERON:0002616!1.40e-58!59;UBERON:0005743!9.44e-58!86;UBERON:0001017!3.09e-56!82;UBERON:0007023!5.77e-56!115;UBERON:0000073!2.10e-53!94;UBERON:0001016!2.10e-53!94;UBERON:0002780!2.75e-53!41;UBERON:0001890!2.75e-53!41;UBERON:0006240!2.75e-53!41;UBERON:0000955!9.60e-53!69;UBERON:0006238!9.60e-53!69;UBERON:0003080!8.58e-52!42;UBERON:0003075!3.04e-51!86;UBERON:0007284!3.04e-51!86;UBERON:0002346!2.51e-48!90;UBERON:0001893!9.04e-47!34;UBERON:0002020!9.37e-47!34;UBERON:0003528!9.37e-47!34;UBERON:0002791!8.35e-45!33;UBERON:0001869!1.65e-42!32;UBERON:0003056!4.98e-37!61;UBERON:0002619!7.39e-34!22;UBERON:0000033!1.42e-32!123;UBERON:0004121!8.83e-32!169;UBERON:0000924!1.13e-30!173;UBERON:0006601!1.13e-30!173;UBERON:0000153!2.12e-30!129;UBERON:0007811!2.12e-30!129;UBERON:0001950!3.87e-30!20;UBERON:0000956!3.04e-29!25;UBERON:0000203!3.04e-29!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0003076!1.71e-19!15;UBERON:0003057!1.71e-19!15;UBERON:0002420!3.39e-19!9;UBERON:0007245!3.39e-19!9;UBERON:0010009!3.39e-19!9;UBERON:0010011!3.39e-19!9;UBERON:0000454!3.39e-19!9;UBERON:0000025!2.11e-17!194;UBERON:0004732!5.18e-16!13;UBERON:0009663!1.49e-15!7;UBERON:0002298!4.32e-14!8;UBERON:0004733!5.38e-14!12;UBERON:0002028!5.38e-14!12;UBERON:0007277!5.38e-14!12;UBERON:0004111!2.34e-13!241;UBERON:0000200!5.18e-13!6;UBERON:0000483!1.20e-12!309;UBERON:0001871!1.46e-12!7;UBERON:0000119!2.27e-12!312;UBERON:0000349!5.17e-11!5;UBERON:0000477!1.03e-09!286;UBERON:0000475!1.74e-09!365;UBERON:0000064!3.21e-09!219;UBERON:0000369!4.22e-09!4;UBERON:0002435!4.22e-09!4;UBERON:0000204!4.22e-09!4;UBERON:0010082!4.22e-09!4;UBERON:0002680!1.58e-08!9;UBERON:0001895!1.58e-08!9;UBERON:0010092!1.58e-08!9;UBERON:0006331!5.16e-08!3;UBERON:0000988!5.40e-08!3;UBERON:0001894!6.37e-08!7;UBERON:0006222!6.37e-08!7;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3;UBERON:0001872!9.66e-08!5;UBERON:0002021!1.59e-07!5;UBERON:0002240!1.72e-07!3;UBERON:0002771!3.29e-07!3;UBERON:0005383!3.82e-07!3;UBERON:0005382!3.82e-07!3 | ||
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|short_description=p4@CAPN3 | |short_description=p4@CAPN3 | ||
}} | }} |
Latest revision as of 16:04, 17 September 2015
Short description: | p4@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPN3_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 63bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.62e-15 | 10 |
melanoblast | 1.62e-15 | 10 |
pigment cell | 1.22e-13 | 14 |
light melanocyte | 6.01e-11 | 3 |
neurecto-epithelial cell | 3.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.73e-07 | 2 |