FFCP PHASE1:Hg19::chr7:107643432..107643443,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3912 | |EntrezGene=3912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6486 | |HGNC=6486 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCS6 | |UniProt=E9PCS6 | ||
|association_with_transcript=161bp_to_ENST00000393559_5end | |association_with_transcript=161bp_to_ENST00000393559_5end | ||
|cluster_id=chr7:107643432..107643443,- | |||
|coexpression_cluster_id=C4642 | |coexpression_cluster_id=C4642 | ||
|description=CAGE_peak_4_at_LAMB1_5end | |description=CAGE_peak_4_at_LAMB1_5end | ||
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|ontology_enrichment_celltype=CL:0000222!4.58e-30!119;CL:0000220!1.72e-20!246;CL:0000055!2.06e-20!180;CL:0002321!3.49e-20!248;CL:0002139!5.11e-17!24;CL:0000680!1.12e-15!57;CL:0000056!1.12e-15!57;CL:0000355!1.12e-15!57;CL:0000213!5.20e-15!57;CL:0000215!5.20e-15!57;CL:0000183!1.31e-14!59;CL:0000187!1.53e-14!54;CL:0000115!1.56e-13!35;CL:0000071!5.18e-13!18;CL:0002546!5.18e-13!18;CL:0002078!3.78e-12!44;CL:0000192!1.66e-11!42;CL:0000514!1.66e-11!42;CL:0000393!3.47e-11!60;CL:0000211!3.47e-11!60;CL:0000359!4.97e-10!32;CL:0000057!2.01e-08!75;CL:0002494!1.37e-07!16;CL:1000413!1.60e-07!9;CL:0000076!7.43e-07!62 | |ontology_enrichment_celltype=CL:0000222!4.58e-30!119;CL:0000220!1.72e-20!246;CL:0000055!2.06e-20!180;CL:0002321!3.49e-20!248;CL:0002139!5.11e-17!24;CL:0000680!1.12e-15!57;CL:0000056!1.12e-15!57;CL:0000355!1.12e-15!57;CL:0000213!5.20e-15!57;CL:0000215!5.20e-15!57;CL:0000183!1.31e-14!59;CL:0000187!1.53e-14!54;CL:0000115!1.56e-13!35;CL:0000071!5.18e-13!18;CL:0002546!5.18e-13!18;CL:0002078!3.78e-12!44;CL:0000192!1.66e-11!42;CL:0000514!1.66e-11!42;CL:0000393!3.47e-11!60;CL:0000211!3.47e-11!60;CL:0000359!4.97e-10!32;CL:0000057!2.01e-08!75;CL:0002494!1.37e-07!16;CL:1000413!1.60e-07!9;CL:0000076!7.43e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.93e-21;24!CL:0000071;3.88e-16;18!CL:0000115;5.94e-15;36!CL:0000359;8.22e-12;32!CL:0000213;2.60e-10;58!CL:0000215;2.60e-10;58!CL:0000192;5.53e-10;43!CL:0000187;2.16e-09;55!CL:0002078;2.30e-09;45!CL:0002494;2.33e-09;16!CL:1000413;3.35e-09;9!CL:0000393;3.98e-08;61!CL:0000211;3.98e-08;61 | |ontology_enrichment_celltype_v019=CL:0002139;2.93e-21;24!CL:0000071;3.88e-16;18!CL:0000115;5.94e-15;36!CL:0000359;8.22e-12;32!CL:0000213;2.60e-10;58!CL:0000215;2.60e-10;58!CL:0000192;5.53e-10;43!CL:0000187;2.16e-09;55!CL:0002078;2.30e-09;45!CL:0002494;2.33e-09;16!CL:1000413;3.35e-09;9!CL:0000393;3.98e-08;61!CL:0000211;3.98e-08;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.37e-35,121;CL:0002139,3.47e-21,24;CL:0000680,2.62e-19,58;CL:0000056,2.62e-19,58;CL:0000355,2.62e-19,58;CL:0000187,7.16e-18,55;CL:0000115,1.74e-17,36;CL:0000071,4.27e-16,18;CL:0002546,4.27e-16,18;CL:0000213,4.91e-16,58;CL:0000215,4.91e-16,58;CL:0002321,3.46e-15,250;CL:0000393,2.28e-14,61;CL:0000211,2.28e-14,61;CL:0002078,6.11e-14,45;CL:0000192,9.85e-14,43;CL:0000514,9.85e-14,43;CL:0000359,1.11e-12,32;CL:0002494,1.39e-09,16;CL:1000413,3.93e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.88e-16;18!CL:0000222;4.17e-10;121!CL:0000514;5.53e-10;43!CL:0000355;1.29e-09;58 | |ontology_enrichment_development_v019=CL:0002546;3.88e-16;18!CL:0000222;4.17e-10;121!CL:0000514;5.53e-10;43!CL:0000355;1.29e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.03e-27!79;UBERON:0007798!1.03e-27!79;UBERON:0004872!8.68e-26!84;UBERON:0003914!2.61e-24!118;UBERON:0000055!9.69e-24!69;UBERON:0001981!6.33e-22!60;UBERON:0007500!6.33e-22!60;UBERON:0004537!6.33e-22!60;UBERON:0006965!6.33e-22!60;UBERON:0001009!1.84e-21!113;UBERON:0004535!2.77e-21!110;UBERON:0000490!6.18e-21!138;UBERON:0000119!1.10e-16!312;UBERON:0000468!2.11e-16!659;UBERON:0001637!5.97e-16!42;UBERON:0003509!5.97e-16!42;UBERON:0004572!5.97e-16!42;UBERON:0000483!6.57e-16!309;UBERON:0005256!7.21e-16!143;UBERON:0001134!3.00e-15!61;UBERON:0002036!3.00e-15!61;UBERON:0003082!3.00e-15!61;UBERON:0002385!7.16e-15!63;UBERON:0001015!7.16e-15!63;UBERON:0000383!7.16e-15!63;UBERON:0004290!9.38e-15!70;UBERON:0000486!3.74e-14!82;UBERON:0000477!4.26e-14!286;UBERON:0002100!4.31e-14!216;UBERON:0000914!9.81e-14!83;UBERON:0002329!9.81e-14!83;UBERON:0003077!9.81e-14!83;UBERON:0003059!9.81e-14!83;UBERON:0007282!9.81e-14!83;UBERON:0009618!9.81e-14!83;UBERON:0007285!9.81e-14!83;UBERON:0001986!5.18e-13!18;UBERON:0004638!5.18e-13!18;UBERON:0004852!5.18e-13!18;UBERON:0000475!9.01e-13!365;UBERON:0004111!2.11e-12!241;UBERON:0003104!3.73e-12!238;UBERON:0009142!3.73e-12!238;UBERON:0004573!2.09e-11!33;UBERON:0004571!2.09e-11!33;UBERON:0000467!2.85e-11!625;UBERON:0000481!3.36e-11!347;UBERON:0000480!4.76e-11!626;UBERON:0000487!2.62e-10!22;UBERON:0000025!1.42e-09!194;UBERON:0006914!1.98e-09!25;UBERON:0000922!5.93e-09!612;UBERON:0002050!8.10e-09!605;UBERON:0005423!8.10e-09!605;UBERON:0000948!1.53e-08!24;UBERON:0005498!1.53e-08!24;UBERON:0004140!1.53e-08!24;UBERON:0009881!1.53e-08!24;UBERON:0004141!1.53e-08!24;UBERON:0003084!1.53e-08!24;UBERON:0007005!1.53e-08!24;UBERON:0004139!1.53e-08!24;UBERON:0004291!1.53e-08!24;UBERON:0000923!1.66e-08!604;UBERON:0005291!1.66e-08!604;UBERON:0006598!1.66e-08!604;UBERON:0002532!1.66e-08!604;UBERON:0007100!1.67e-08!27;UBERON:0003103!3.68e-08!69;UBERON:0000926!3.99e-08!448;UBERON:0004120!3.99e-08!448;UBERON:0006603!3.99e-08!448;UBERON:0000947!8.89e-08!21;UBERON:0010191!8.89e-08!21;UBERON:0003915!1.60e-07!9;UBERON:0004700!1.60e-07!9;UBERON:0001917!1.60e-07!9 | |ontology_enrichment_uberon=UBERON:0002049!1.03e-27!79;UBERON:0007798!1.03e-27!79;UBERON:0004872!8.68e-26!84;UBERON:0003914!2.61e-24!118;UBERON:0000055!9.69e-24!69;UBERON:0001981!6.33e-22!60;UBERON:0007500!6.33e-22!60;UBERON:0004537!6.33e-22!60;UBERON:0006965!6.33e-22!60;UBERON:0001009!1.84e-21!113;UBERON:0004535!2.77e-21!110;UBERON:0000490!6.18e-21!138;UBERON:0000119!1.10e-16!312;UBERON:0000468!2.11e-16!659;UBERON:0001637!5.97e-16!42;UBERON:0003509!5.97e-16!42;UBERON:0004572!5.97e-16!42;UBERON:0000483!6.57e-16!309;UBERON:0005256!7.21e-16!143;UBERON:0001134!3.00e-15!61;UBERON:0002036!3.00e-15!61;UBERON:0003082!3.00e-15!61;UBERON:0002385!7.16e-15!63;UBERON:0001015!7.16e-15!63;UBERON:0000383!7.16e-15!63;UBERON:0004290!9.38e-15!70;UBERON:0000486!3.74e-14!82;UBERON:0000477!4.26e-14!286;UBERON:0002100!4.31e-14!216;UBERON:0000914!9.81e-14!83;UBERON:0002329!9.81e-14!83;UBERON:0003077!9.81e-14!83;UBERON:0003059!9.81e-14!83;UBERON:0007282!9.81e-14!83;UBERON:0009618!9.81e-14!83;UBERON:0007285!9.81e-14!83;UBERON:0001986!5.18e-13!18;UBERON:0004638!5.18e-13!18;UBERON:0004852!5.18e-13!18;UBERON:0000475!9.01e-13!365;UBERON:0004111!2.11e-12!241;UBERON:0003104!3.73e-12!238;UBERON:0009142!3.73e-12!238;UBERON:0004573!2.09e-11!33;UBERON:0004571!2.09e-11!33;UBERON:0000467!2.85e-11!625;UBERON:0000481!3.36e-11!347;UBERON:0000480!4.76e-11!626;UBERON:0000487!2.62e-10!22;UBERON:0000025!1.42e-09!194;UBERON:0006914!1.98e-09!25;UBERON:0000922!5.93e-09!612;UBERON:0002050!8.10e-09!605;UBERON:0005423!8.10e-09!605;UBERON:0000948!1.53e-08!24;UBERON:0005498!1.53e-08!24;UBERON:0004140!1.53e-08!24;UBERON:0009881!1.53e-08!24;UBERON:0004141!1.53e-08!24;UBERON:0003084!1.53e-08!24;UBERON:0007005!1.53e-08!24;UBERON:0004139!1.53e-08!24;UBERON:0004291!1.53e-08!24;UBERON:0000923!1.66e-08!604;UBERON:0005291!1.66e-08!604;UBERON:0006598!1.66e-08!604;UBERON:0002532!1.66e-08!604;UBERON:0007100!1.67e-08!27;UBERON:0003103!3.68e-08!69;UBERON:0000926!3.99e-08!448;UBERON:0004120!3.99e-08!448;UBERON:0006603!3.99e-08!448;UBERON:0000947!8.89e-08!21;UBERON:0010191!8.89e-08!21;UBERON:0003915!1.60e-07!9;UBERON:0004700!1.60e-07!9;UBERON:0001917!1.60e-07!9 | ||
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|phase1_expression=4.72363786103447,3.8538094300377,4.79244973926302,1.0007329835313,7.15137751083661,0.872338524100369,2.53299878168311,1.26343974685366,2.61185628199839,0.737201809504527,0,2.62129646556207,1.05506791291381,1.48519623552056,0.662794751455832,2.6893005858071,4.82155622419182,4.38186054232424,1.46379839637152,0.861847406537515,2.24400760368678,0.626909442956176,0.286235987131057,1.36874425072884,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,6.70700859703636,4.2194645408365,1.0843174571537,0,0.869079113764942,1.5905718941022,0,0.945348171640679,2.4390233720882,2.0202000709419,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,7.7517338873015,4.30117297553062,8.67851254018986,13.5673906061762,20.1359729380755,15.4066103486438,7.31482382878837,5.94358546089456,7.1153252537342,13.0541038978221,8.86224497640123,9.12326526862215,7.32186172644509,9.19157700864672,21.0636906449257,8.75137337183982,11.2264686313085,5.40535106319947,4.5994991239765,3.79706263827252,6.77846452542507,0,0,0,0.993943903390637,4.68532893158945,4.8991396900891,10.6129549677061,1.41867352879343,2.80338800071154,0,4.68668341992604,5.91300967259556,8.48677234039035,8.50001896189985,4.08665054641315,8.64263886719998,0,1.5608003841516,1.1409436430889,0.747243402759005,1.17434498643765,0.971237666208789,0.702254033511242,0.816616685019573,0.491337269247072,1.34323515528495,2.37600571456411,0.494533858557114,0,0.718618141816238,0,0.125118519871964,1.38532057742091,0.877955241761676,1.22595118319608,0.901428353439581,3.97012641060074,4.84352016359927,0.427114777637135,2.54318281391474,8.10245959427886,1.44273540933814,4.12224864073007,1.48893485065272,3.71307930930786,1.65642908774038,4.54380793639406,1.47279837827679,0.646584227275248,7.81021103536552,1.71278566986988,0.508681776931463,1.35282597214308,1.09098448236334,2.00763216772303,0.121973706129595,0.265059536642971,0.116193942869518,0.621966330092223,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0,0.110293972732394,0.435758888184812,0.474541238222193,0.134831308160164,0,0.38474715694639,2.21446636387394,1.40241773803446,3.7041661019826,5.88034845542168,0,0,0.590789906681404,0,0.368965315629341,1.71567810298526,0.329250856225877,0,0.201057944823262,1.29623823221941,0,0,2.88662684050547,0.579652024875384,6.34006948873437,14.4366447761074,12.9635943521451,9.32245345949531,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,1.61205340865127,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.514137463516618,1.20137223137567,0.571652865261156,1.23344192779897,2.61576041299968,4.18028229179415,1.55126058909333,7.15312891703765,4.22651376278,2.12750493267896,3.12022310734098,0.514414748524284,0,0.266422179016099,8.14974563851441,10.8524321078289,1.64648067356154,2.93162565864362,6.04166312862328,1.58390374586686,3.61727252471503,3.48613383440118,5.19859554146697,0,0,0,1.67737398844108,2.29723871668228,0,2.75084482668401,3.08214483825575,2.68591444859843,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,2.20844685094452,1.50051156317903,1.35632511849868,0.207970861530807,0.356857977594324,0.788512075169673,0.35142424497814,0,2.27407504055985,0,0.664225598535437,0.921845842708516,1.39013783148933,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,0,2.41912234663744,2.23297027036899,2.60885354589706,1.12264037773229,1.40953064181271,1.02341449813341,2.41280881715411,0,0.616838775210622,2.13074070375753,1.8067974323038,2.07701771673448,0.813472649219715,0.362578348774867,2.00506470303285,0.0920809889358963,2.52591785962135,0.364182336013434,1.44236856455367,1.35359883872224,3.69673618101191,3.13739907670742,1.46139224653261,4.22206515571503,4.54933536283586,3.74206151608334,4.96606607034921,3.08454505380579,1.35473218771926,1.50506932156456,1.01950509218015,0,0.223874754722178,0,0,0,0.328014645699706,0,0.618246069886334,0.366277859273374,0.082509499920588,0.574265537996172,1.95018073810956,1.6068392984416,1.16004861950546,2.46477787383431,1.99554777143968,1.92971201478343,4.40423003959922,2.90033387828457,1.87498580315422,2.04773681987496,2.97512847649761,1.72971060628596,2.04180339991335,0.809262246844399,0,3.1481234683064,0,5.23657086299351,2.66153015158511,1.73986598415015,6.30102344953328,2.86249773483982,3.34942532423701,2.21465597303108,6.67205678733387,0.767693373934002,5.56320684444097,5.72765846266686,4.70969184119538,1.2591072030832,1.64722217841633,1.53156123049392,4.24583211303964,3.17020642346017,2.94880919367287,2.43816869544795,2.92456187557541,0,2.45699840534374,3.25232493493539,7.910568163417,1.10273068709225,3.98063385144732,3.06915619677634,0.578775534266688,3.27947376023316,3.24656603140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| ||
|short_description=p4@LAMB1 | |short_description=p4@LAMB1 | ||
}} | }} |
Latest revision as of 02:18, 25 September 2015
Short description: | p4@LAMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAMB1_5end |
Coexpression cluster: | C4642_liposarcoma_extraskeletal_Endothelial_Lymphatic_Mesenchymal_large_glioblastoma |
Association with transcript: | 161bp_to_ENST00000393559_5end |
EntrezGene: | LAMB1 |
HGNC: | 6486 |
UniProt: | E9PCS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.37e-35 | 121 |
endothelial cell of vascular tree | 3.47e-21 | 24 |
muscle precursor cell | 2.62e-19 | 58 |
myoblast | 2.62e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-19 | 58 |
muscle cell | 7.16e-18 | 55 |
endothelial cell | 1.74e-17 | 36 |
blood vessel endothelial cell | 4.27e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.27e-16 | 18 |
lining cell | 4.91e-16 | 58 |
barrier cell | 4.91e-16 | 58 |
embryonic cell | 3.46e-15 | 250 |
electrically responsive cell | 2.28e-14 | 61 |
electrically active cell | 2.28e-14 | 61 |
meso-epithelial cell | 6.11e-14 | 45 |
smooth muscle cell | 9.85e-14 | 43 |
smooth muscle myoblast | 9.85e-14 | 43 |
vascular associated smooth muscle cell | 1.11e-12 | 32 |
cardiocyte | 1.39e-09 | 16 |
endothelial cell of artery | 3.93e-09 | 9 |