FFCP PHASE1:Hg19::chr21:43712617..43712632,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:43712617..43712632,+
|short_description=p@chr21:43712617..43712632,+
|description=CAGE_peak_at_chr21:43712617..43712632,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:43712617..43712632,+ | |||
|coexpression_cluster_id=C4079 | |||
|description=CAGE_peak_at_chr21:43712617..43712632,+ | |||
|id=chr21:43712617..43712632,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.62e-16!140;CL:0002087!1.43e-15!119;CL:0002031!1.59e-14!124;CL:0000860!7.30e-13!45;CL:0002057!3.43e-12!42;CL:0000037!3.53e-10!172;CL:0000566!3.53e-10!172;CL:0002032!4.21e-10!165;CL:0000837!4.21e-10!165;CL:0000988!4.04e-09!182;CL:0002009!9.57e-09!65;CL:0000766!3.72e-08!76;CL:0000557!4.03e-08!71;CL:0002194!4.19e-08!63;CL:0000576!4.19e-08!63;CL:0000040!4.19e-08!63;CL:0000559!4.19e-08!63;CL:0000838!1.69e-07!52;CL:0000839!2.98e-07!70;CL:0000791!3.26e-07!18;CL:0000789!3.26e-07!18;CL:0002420!3.26e-07!18;CL:0002419!3.26e-07!18;CL:0000790!3.26e-07!18;CL:0000542!3.50e-07!53;CL:0000051!3.50e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.82e-10;6!CL:0000860;6.74e-10;33!CL:0002057;6.74e-10;33!CL:0000791;2.65e-09;18!CL:0000789;2.65e-09;18!CL:0002419;2.65e-09;18!CL:0000623;6.59e-08;3!CL:0000473;5.87e-07;39!CL:0000234;5.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.13e-13,115;CL:0000738,1.98e-11,136;CL:0002031,3.50e-11,120;CL:0000860,3.80e-10,42;CL:0002057,3.80e-10,42;CL:0000624,8.26e-10,6;CL:0002032,1.09e-09,161;CL:0000837,1.09e-09,161;CL:0000037,1.42e-09,168;CL:0000791,3.50e-09,18;CL:0000789,3.50e-09,18;CL:0002420,3.50e-09,18;CL:0002419,3.50e-09,18;CL:0000790,3.50e-09,18;CL:0000988,1.27e-08,177;CL:0000473,2.17e-08,48;CL:0000234,2.17e-08,48;CL:0000623,5.58e-08,3;CL:0000825,5.58e-08,3;CL:0000838,7.03e-08,52;CL:0000542,1.17e-07,53;CL:0000051,1.17e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-09;18!UBERON:0006215;1.46e-08;3!CL:0002057;1.54e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-23!57;UBERON:0005068!1.97e-23!57;UBERON:0006241!1.97e-23!57;UBERON:0007135!1.97e-23!57;UBERON:0007023!5.96e-22!115;UBERON:0002780!7.12e-20!41;UBERON:0001890!7.12e-20!41;UBERON:0006240!7.12e-20!41;UBERON:0003080!4.54e-19!42;UBERON:0002616!1.97e-18!59;UBERON:0000955!7.63e-17!69;UBERON:0006238!7.63e-17!69;UBERON:0001017!2.24e-15!82;UBERON:0002020!5.01e-15!34;UBERON:0003528!5.01e-15!34;UBERON:0001893!7.54e-15!34;UBERON:0005743!1.62e-14!86;UBERON:0002791!2.31e-14!33;UBERON:0003075!1.26e-13!86;UBERON:0007284!1.26e-13!86;UBERON:0001869!1.99e-13!32;UBERON:0000073!5.59e-13!94;UBERON:0001016!5.59e-13!94;UBERON:0002346!6.50e-13!90;UBERON:0002619!1.79e-12!22;UBERON:0003056!3.03e-11!61;UBERON:0001950!8.06e-11!20;UBERON:0000956!3.78e-10!25;UBERON:0000203!3.78e-10!25;UBERON:0002390!1.56e-08!102;UBERON:0003061!1.56e-08!102;UBERON:0002193!1.58e-08!112;UBERON:0000153!3.11e-08!129;UBERON:0007811!3.11e-08!129;UBERON:0000033!3.16e-07!123;UBERON:0001894!7.54e-07!7;UBERON:0006222!7.54e-07!7;UBERON:0002420!8.99e-07!9;UBERON:0007245!8.99e-07!9;UBERON:0010009!8.99e-07!9;UBERON:0010011!8.99e-07!9;UBERON:0000454!8.99e-07!9;UBERON:0001871!9.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.84e-18;41!UBERON:0001890;4.84e-18;41!UBERON:0000073;3.18e-16;53!UBERON:0002616;3.18e-16;53!UBERON:0002791;9.51e-13;32!UBERON:0001893;1.56e-12;34!UBERON:0003528;1.72e-12;34!UBERON:0002020;1.72e-12;34!UBERON:0002420;7.16e-12;9!UBERON:0007245;7.16e-12;9!UBERON:0010009;7.16e-12;9!UBERON:0010011;7.16e-12;9!UBERON:0000454;7.16e-12;9!UBERON:0001894;8.73e-12;7!UBERON:0001869;2.89e-11;32!UBERON:0002619;3.31e-10;22!UBERON:0002784;1.29e-09;4!UBERON:0003296;1.92e-09;4!UBERON:0010133;1.92e-09;4!UBERON:0000125;9.30e-09;9!UBERON:0002308;9.30e-09;9!UBERON:0000956;9.73e-09;25!UBERON:0000203;9.73e-09;25!UBERON:0000955;1.28e-08;68!UBERON:0009663;2.68e-08;7!UBERON:0000349;8.44e-08;5!UBERON:0001950;1.78e-07;20!UBERON:0001016;1.82e-07;83!UBERON:0001017;2.22e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.26e-27,56;UBERON:0005068,4.26e-27,56;UBERON:0006241,4.26e-27,56;UBERON:0007135,4.26e-27,56;UBERON:0000073,5.94e-27,53;UBERON:0002616,5.94e-27,53;UBERON:0002780,1.08e-23,41;UBERON:0001890,1.08e-23,41;UBERON:0003080,1.08e-23,41;UBERON:0006240,1.08e-23,41;UBERON:0000955,6.52e-19,68;UBERON:0006238,6.52e-19,68;UBERON:0001017,5.59e-16,81;UBERON:0003075,5.59e-16,82;UBERON:0007284,5.59e-16,82;UBERON:0003528,2.88e-15,34;UBERON:0002020,2.88e-15,34;UBERON:0001893,3.63e-15,34;UBERON:0002346,7.12e-15,86;UBERON:0001016,9.02e-15,89;UBERON:0002791,1.90e-14,32;UBERON:0003056,6.15e-14,61;UBERON:0001869,1.46e-12,32;UBERON:0001894,5.19e-12,7;UBERON:0006222,5.19e-12,7;UBERON:0002420,5.33e-12,9;UBERON:0007245,5.33e-12,9;UBERON:0010009,5.33e-12,9;UBERON:0010011,5.33e-12,9;UBERON:0000454,5.33e-12,9;UBERON:0010371,6.46e-12,104;UBERON:0007023,2.81e-11,114;UBERON:0002619,2.73e-10,22;UBERON:0002784,6.34e-10,4;UBERON:0003296,1.13e-09,4;UBERON:0010133,1.13e-09,4;UBERON:0000125,7.24e-09,9;UBERON:0002308,7.24e-09,9;UBERON:0000956,8.24e-09,25;UBERON:0000203,8.24e-09,25;UBERON:0010314,1.64e-08,132;UBERON:0009663,2.93e-08,7;UBERON:0000349,5.13e-08,5;UBERON:0001950,1.57e-07,20 | |||
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| ||
|short_description=p@chr21:43712617..43712632,+ | |||
}} | }} |
Latest revision as of 18:08, 28 July 2015
Short description: | p@chr21:43712617..43712632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43712617..43712632, + |
Coexpression cluster: | C4079_CD4_CD8_CD14_cerebellum_CD19_Natural_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 6.13e-13 | 115 |
leukocyte | 1.98e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 3.50e-11 | 120 |
classical monocyte | 3.80e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.80e-10 | 42 |
CD4-positive, alpha-beta T cell | 8.26e-10 | 6 |
hematopoietic oligopotent progenitor cell | 1.09e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-09 | 161 |
hematopoietic stem cell | 1.42e-09 | 168 |
mature alpha-beta T cell | 3.50e-09 | 18 |
alpha-beta T cell | 3.50e-09 | 18 |
immature T cell | 3.50e-09 | 18 |
mature T cell | 3.50e-09 | 18 |
immature alpha-beta T cell | 3.50e-09 | 18 |
hematopoietic cell | 1.27e-08 | 177 |
defensive cell | 2.17e-08 | 48 |
phagocyte | 2.17e-08 | 48 |
natural killer cell | 5.58e-08 | 3 |
pro-NK cell | 5.58e-08 | 3 |
lymphoid lineage restricted progenitor cell | 7.03e-08 | 52 |
lymphocyte | 1.17e-07 | 53 |
common lymphoid progenitor | 1.17e-07 | 53 |