FFCP PHASE1:Hg19::chr22:38380543..38380569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6663 | |EntrezGene=6663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11190 | |HGNC=11190 | ||
|TSSclassifier=strong | |||
|UniProt=P56693 | |UniProt=P56693 | ||
|association_with_transcript=0bp_to_ENST00000396884_5end | |association_with_transcript=0bp_to_ENST00000396884_5end | ||
|cluster_id=chr22:38380543..38380569,- | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_1_at_SOX10_5end | |description=CAGE_peak_1_at_SOX10_5end | ||
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|ontology_enrichment_celltype=CL:0000147!8.85e-14!14;CL:0000148!5.37e-13!10;CL:0000541!5.37e-13!10 | |ontology_enrichment_celltype=CL:0000147!8.85e-14!14;CL:0000148!5.37e-13!10;CL:0000541!5.37e-13!10 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.47e-15;14!CL:0000148;1.33e-14;10 | |ontology_enrichment_celltype_v019=CL:0000147;1.47e-15;14!CL:0000148;1.33e-14;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.45e-15,14;CL:0000148,1.37e-14,10;CL:0000541,1.37e-14,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.78e-17;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.78e-17;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@SOX10 | |short_description=p1@SOX10 | ||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p1@SOX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX10_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 0bp_to_ENST00000396884_5end |
EntrezGene: | SOX10 |
HGNC: | 11190 |
UniProt: | P56693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.45e-15 | 14 |
melanocyte | 1.37e-14 | 10 |
melanoblast | 1.37e-14 | 10 |