Personal tools

FFCP PHASE1:Mm9::chr7:3366466..3366480,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=168
|MCL_coexpression_id=168
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr7:3366466..3366480,+
|description=CAGE_peak_at_chr7:3366466..3366480,+
|description=CAGE_peak_at_chr7:3366466..3366480,+
|id=chr7:3366466..3366480,+
|id=chr7:3366466..3366480,+
|ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0002319!4.19e-09!43;CL:0000055!5.94e-09!50
|ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0002319!4.19e-09!43;CL:0000055!5.94e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.84e-16,23;CL:0000337,3.84e-16,23;CL:0002319,1.18e-13,43;CL:0000221,2.71e-13,44;CL:0000133,2.71e-13,44;CL:0002610,4.25e-13,3;CL:0002609,7.61e-11,6;CL:0000540,9.01e-11,33;CL:0000047,9.01e-11,33;CL:0000031,9.01e-11,33;CL:0000404,9.01e-11,33;CL:0000393,7.19e-09,39;CL:0000211,7.19e-09,39;CL:0002321,1.61e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.27e-23!73;UBERON:0005743!1.27e-23!73;UBERON:0000073!2.41e-22!75;UBERON:0001016!2.41e-22!75;UBERON:0002346!2.69e-21!71;UBERON:0003075!2.69e-21!71;UBERON:0007284!2.69e-21!71;UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!8.04e-21!50;UBERON:0006238!8.04e-21!50;UBERON:0004121!5.04e-20!102;UBERON:0000924!5.04e-20!102;UBERON:0006601!5.04e-20!102;UBERON:0000033!5.50e-20!63;UBERON:0002616!5.99e-20!49;UBERON:0002020!1.25e-15!34;UBERON:0003056!1.64e-15!49;UBERON:0003080!1.97e-14!40;UBERON:0002780!9.20e-14!39;UBERON:0001890!9.20e-14!39;UBERON:0006240!9.20e-14!39;UBERON:0002791!7.73e-13!29;UBERON:0003528!7.73e-13!29;UBERON:0001893!7.73e-13!29;UBERON:0000153!1.97e-12!94;UBERON:0007811!1.69e-11!86;UBERON:0000956!5.31e-10!21;UBERON:0001869!5.31e-10!21;UBERON:0000203!5.31e-10!21;UBERON:0000025!8.65e-08!114;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0002619!2.29e-07!17
|ontology_enrichment_uberon=UBERON:0001017!1.27e-23!73;UBERON:0005743!1.27e-23!73;UBERON:0000073!2.41e-22!75;UBERON:0001016!2.41e-22!75;UBERON:0002346!2.69e-21!71;UBERON:0003075!2.69e-21!71;UBERON:0007284!2.69e-21!71;UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!8.04e-21!50;UBERON:0006238!8.04e-21!50;UBERON:0004121!5.04e-20!102;UBERON:0000924!5.04e-20!102;UBERON:0006601!5.04e-20!102;UBERON:0000033!5.50e-20!63;UBERON:0002616!5.99e-20!49;UBERON:0002020!1.25e-15!34;UBERON:0003056!1.64e-15!49;UBERON:0003080!1.97e-14!40;UBERON:0002780!9.20e-14!39;UBERON:0001890!9.20e-14!39;UBERON:0006240!9.20e-14!39;UBERON:0002791!7.73e-13!29;UBERON:0003528!7.73e-13!29;UBERON:0001893!7.73e-13!29;UBERON:0000153!1.97e-12!94;UBERON:0007811!1.69e-11!86;UBERON:0000956!5.31e-10!21;UBERON:0001869!5.31e-10!21;UBERON:0000203!5.31e-10!21;UBERON:0000025!8.65e-08!114;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0002619!2.29e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0000073,1.81e-21,54;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0000955,6.96e-17,47;UBERON:0006238,6.96e-17,47;UBERON:0001049,5.93e-15,52;UBERON:0005068,5.93e-15,52;UBERON:0006241,5.93e-15,52;UBERON:0007135,5.93e-15,52;UBERON:0002616,8.19e-15,46;UBERON:0004684,4.25e-13,3;UBERON:0002275,4.25e-13,3;UBERON:0002346,1.17e-11,64;UBERON:0003075,1.17e-11,64;UBERON:0007284,1.17e-11,64;UBERON:0000956,2.32e-11,21;UBERON:0001869,2.32e-11,21;UBERON:0000203,2.32e-11,21;UBERON:0004733,3.27e-11,6;UBERON:0004732,3.27e-11,6;UBERON:0002028,3.27e-11,6;UBERON:0007277,3.27e-11,6;UBERON:0002020,2.25e-10,34;UBERON:0003528,5.43e-10,29;UBERON:0002791,5.43e-10,29;UBERON:0001893,5.43e-10,29;UBERON:0002037,6.45e-10,4;UBERON:0002680,6.45e-10,4;UBERON:0001895,6.45e-10,4;UBERON:0010092,6.45e-10,4;UBERON:0006215,6.45e-10,4;UBERON:0010371,6.80e-10,73;UBERON:0002780,9.96e-09,39;UBERON:0001890,9.96e-09,39;UBERON:0006240,9.96e-09,39;UBERON:0003080,1.80e-08,40;UBERON:0003076,1.81e-08,12;UBERON:0003057,1.81e-08,12;UBERON:0002619,2.65e-08,17;UBERON:0010314,2.66e-07,92;UBERON:0011216,6.78e-07,194;UBERON:0002021,7.90e-07,10;UBERON:0000411,7.90e-07,10;UBERON:0001950,7.90e-07,10
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0,1.15265491596466,0.622137673850866,1.21505344498522,1.05162480675691,0.285650984403804,0.220868540951614,0.489963196859816,1.24599112323707,1.83843757322004,1.10115880999389,1.91531007127782,2.15049146558741,0.395658863190582,0.823388792421687,0,1.11673199600552,0.56276261003168,0.15279824777681,0.883885756421003,1.56608848879013,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.46390398505774,5.65506108396329,0.766371165625774,0,0,0,0.898743836428936,0.915001205637253,0.376963056338593,0.869121600961382,0.767146371990992,1.0389402227978,0.648965052271031,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0,0.540186389416048,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.696710015581316,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0.491804836130026,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.3748254587495,0.685082519770642,2.2661816921691,0,0.900642406448441,0,1.03552062350364,0.31136204275253,0.798049746802062,0,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.474540072496697,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0,1.15265491596466,0.622137673850866,1.21505344498522,1.05162480675691,0.285650984403804,0.220868540951614,0.489963196859816,1.24599112323707,1.83843757322004,1.10115880999389,1.91531007127782,2.15049146558741,0.395658863190582,0.823388792421687,0,1.11673199600552,0.56276261003168,0.15279824777681,0.883885756421003,1.56608848879013,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.46390398505774,5.65506108396329,0.766371165625774,0,0,0,0.898743836428936,0.915001205637253,0.376963056338593,0.869121600961382,0.767146371990992,1.0389402227978,0.648965052271031,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0,0.540186389416048,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.696710015581316,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0.491804836130026,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.3748254587495,0.685082519770642,2.2661816921691,0,0.900642406448441,0,1.03552062350364,0.31136204275253,0.798049746802062,0,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.474540072496697,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p@chr7:3366466..3366480,+
|short_description=p@chr7:3366466..3366480,+
}}
}}

Latest revision as of 02:42, 5 August 2015

Short description:p@chr7:3366466..3366480, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:3366466..3366480, +
Coexpression cluster:MCL_coexpression_mm9:168
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:3366466..3366480+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system5.80e-2473
nervous system3.07e-2375
regional part of nervous system1.81e-2154
ectoderm-derived structure1.15e-1795
ectoderm1.15e-1795
presumptive ectoderm1.15e-1795
brain6.96e-1747
future brain6.96e-1747
neural tube5.93e-1552
neural rod5.93e-1552
future spinal cord5.93e-1552
neural keel5.93e-1552
regional part of brain8.19e-1546
raphe nuclei4.25e-133
reticular formation4.25e-133
neurectoderm1.17e-1164
neural plate1.17e-1164
presumptive neural plate1.17e-1164
cerebral cortex2.32e-1121
cerebral hemisphere2.32e-1121
pallium2.32e-1121
segmental subdivision of hindbrain3.27e-116
segmental subdivision of nervous system3.27e-116
hindbrain3.27e-116
presumptive hindbrain3.27e-116
gray matter2.25e-1034
brain grey matter5.43e-1029
regional part of telencephalon5.43e-1029
telencephalon5.43e-1029
cerebellum6.45e-104
regional part of metencephalon6.45e-104
metencephalon6.45e-104
future metencephalon6.45e-104
rhombic lip6.45e-104
ecto-epithelium6.80e-1073
regional part of forebrain9.96e-0939
forebrain9.96e-0939
future forebrain9.96e-0939
anterior neural tube1.80e-0840
posterior neural tube1.81e-0812
chordal neural plate1.81e-0812
regional part of cerebral cortex2.65e-0817
structure with developmental contribution from neural crest2.66e-0792
organ system subdivision6.78e-07194
occipital lobe7.90e-0710
visual cortex7.90e-0710
neocortex7.90e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:3366466..3366480,%2B&oldid=3850231"