FFCP PHASE1:Mm9::chr8:87500597..87500641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=231 | |MCL_coexpression_id=231 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:87500597..87500641,+ | |||
|description=CAGE_peak_at_chr8:87500597..87500641,+ | |description=CAGE_peak_at_chr8:87500597..87500641,+ | ||
|id=chr8:87500597..87500641,+ | |id=chr8:87500597..87500641,+ | ||
|ontology_enrichment_celltype=CL:0000063!3.36e-23!66;CL:0002320!1.80e-17!46;CL:0000134!1.80e-17!46;CL:0000219!8.16e-16!54;CL:0000988!3.93e-14!32;CL:0002032!3.93e-14!32;CL:0000037!3.93e-14!32;CL:0000566!3.93e-14!32;CL:0000837!3.93e-14!32;CL:0000144!8.72e-14!121;CL:0000012!8.72e-14!121;CL:0002371!2.79e-12!118;CL:0002031!1.17e-11!25;CL:0000548!5.69e-11!115;CL:0000004!5.69e-11!115;CL:0000255!5.69e-11!115;CL:0000034!2.20e-10!97;CL:0000723!4.47e-09!91;CL:0000048!4.47e-09!91;CL:0000838!8.88e-09!12;CL:0000738!2.86e-08!17;CL:0002087!2.86e-08!17;CL:0000084!3.72e-08!11;CL:0000827!3.72e-08!11;CL:0000049!5.02e-08!19;CL:0000066!1.22e-07!25;CL:0000791!1.96e-07!9;CL:0000789!1.96e-07!9;CL:0002420!1.96e-07!9;CL:0002419!1.96e-07!9;CL:0000790!1.96e-07!9;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000624!8.64e-07!8 | |ontology_enrichment_celltype=CL:0000063!3.36e-23!66;CL:0002320!1.80e-17!46;CL:0000134!1.80e-17!46;CL:0000219!8.16e-16!54;CL:0000988!3.93e-14!32;CL:0002032!3.93e-14!32;CL:0000037!3.93e-14!32;CL:0000566!3.93e-14!32;CL:0000837!3.93e-14!32;CL:0000144!8.72e-14!121;CL:0000012!8.72e-14!121;CL:0002371!2.79e-12!118;CL:0002031!1.17e-11!25;CL:0000548!5.69e-11!115;CL:0000004!5.69e-11!115;CL:0000255!5.69e-11!115;CL:0000034!2.20e-10!97;CL:0000723!4.47e-09!91;CL:0000048!4.47e-09!91;CL:0000838!8.88e-09!12;CL:0000738!2.86e-08!17;CL:0002087!2.86e-08!17;CL:0000084!3.72e-08!11;CL:0000827!3.72e-08!11;CL:0000049!5.02e-08!19;CL:0000066!1.22e-07!25;CL:0000791!1.96e-07!9;CL:0000789!1.96e-07!9;CL:0002420!1.96e-07!9;CL:0002419!1.96e-07!9;CL:0000790!1.96e-07!9;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000624!8.64e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,9.08e-26,46;CL:0000134,9.08e-26,46;CL:0000219,3.11e-22,54;CL:0000988,1.58e-21,32;CL:0002032,1.58e-21,32;CL:0000037,1.58e-21,32;CL:0000837,1.58e-21,32;CL:0000034,3.47e-19,97;CL:0000723,3.14e-17,91;CL:0000048,3.14e-17,91;CL:0002031,7.02e-17,25;CL:0000838,1.02e-12,12;CL:0000084,9.31e-12,11;CL:0000827,9.31e-12,11;CL:0000738,1.19e-11,17;CL:0002087,1.19e-11,17;CL:0000542,2.20e-11,13;CL:0000051,2.20e-11,13;CL:0000049,2.70e-11,19;CL:0000791,1.20e-10,9;CL:0000789,1.20e-10,9;CL:0002420,1.20e-10,9;CL:0002419,1.20e-10,9;CL:0000790,1.20e-10,9;CL:0000624,1.18e-09,8;CL:0000066,4.13e-09,25;CL:0000763,1.05e-08,16;CL:0000893,1.40e-07,6;CL:0002489,1.40e-07,6;CL:0000898,1.40e-07,6;CL:0000809,1.40e-07,6;CL:0000810,1.40e-07,6;CL:0000895,1.40e-07,6;CL:0000808,1.40e-07,6;CL:0000894,1.40e-07,6;CL:0000806,1.40e-07,6;CL:0000807,1.40e-07,6;CL:0000805,1.40e-07,6;CL:0002425,1.40e-07,6;CL:0002436,1.40e-07,6;CL:0002427,1.40e-07,6;CL:0002428,1.40e-07,6;CL:0002429,1.40e-07,6;CL:0002433,1.40e-07,6;CL:0002431,1.40e-07,6;CL:0002432,1.40e-07,6;CL:0000223,2.06e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.80e-17!46;UBERON:0002204!1.99e-11!32;UBERON:0002193!3.27e-10!48;UBERON:0002390!1.46e-09!45;UBERON:0003061!1.46e-09!45;UBERON:0003081!2.52e-09!88;UBERON:0000490!7.47e-09!66;UBERON:0001474!2.90e-08!22;UBERON:0004765!2.90e-08!22;UBERON:0001434!2.90e-08!22;UBERON:0002405!9.85e-08!70;UBERON:0002371!1.74e-07!16 | |ontology_enrichment_uberon=UBERON:0002384!1.80e-17!46;UBERON:0002204!1.99e-11!32;UBERON:0002193!3.27e-10!48;UBERON:0002390!1.46e-09!45;UBERON:0003061!1.46e-09!45;UBERON:0003081!2.52e-09!88;UBERON:0000490!7.47e-09!66;UBERON:0001474!2.90e-08!22;UBERON:0004765!2.90e-08!22;UBERON:0001434!2.90e-08!22;UBERON:0002405!9.85e-08!70;UBERON:0002371!1.74e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.08e-26,46;UBERON:0002204,1.52e-13,32;UBERON:0000490,3.12e-10,66;UBERON:0002390,8.13e-10,45;UBERON:0003061,8.13e-10,45;UBERON:0002371,1.05e-09,16;UBERON:0002193,1.48e-09,48;UBERON:0002405,1.48e-09,48;UBERON:0001474,2.91e-09,22;UBERON:0004765,2.91e-09,22;UBERON:0001434,2.91e-09,22;UBERON:0007524,8.41e-08,11;UBERON:0003077,8.41e-08,11;UBERON:0007285,8.41e-08,11;UBERON:0000485,1.55e-07,11;UBERON:0003081,8.76e-07,87 | |||
|phase1_expression=3.84357233051505,1.39590163055744,0.909998478779072,7.86406949397758,5.00895729946347,2.68606835059024,4.20502753071946,61.9791952519566,116.291484497277,90.1148426339675,29.1070545983358,17.3903306609833,47.422602190944,47.0321765014206,1.33243904726265,2.22722794128809,1.39912375625629,10.4102514568218,7.40417941470989,8.91218268775863,0.255129870453209,1.98581902401771,3.91799683708403,0.799962113967033,0.91763712426868,2.29692785646008,0.86152399231815,1.939241094173,0.570070258369122,0,0.221730510655305,7.62036808151557,4.30545351309199,0,16.7533939455739,8.47796691328311,13.0668388007916,12.5559489221072,9.37602413428561,6.28228492768558,78.2347879081249,40.2996836125483,13.5942898848723,1.25896817975577,1.92616169317078,1.46837401729345,0,0.436050312760893,0.659058548203415,0.58328969722285,0.55994568650145,0,23.1539996359676,75.4376627691798,39.9951620979532,1.02903774414379,3.72493471920384,2.57836046138721,0.202316460859598,0,0,2.37191172448392,4.4464739805557,1.7997994345628,1.97773272513395,2.8419204597844,0.898800331555214,2.30530983192933,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0.142371680799103,0.186399445825301,3.10477392666055,1.51143120213571,95.9451457602553,3.44169550792555,2.03991400112325,1.61910957491345,0.649776417447669,2.68816132258401,0.280888840263504,0.681721290312231,0,1.06001872353102,4.92951969218382,0,2.54805239706646,0,0.865964164044856,3.04031838570118,2.02209778005913,0.34255163915718,3.10725460376606,0.742210695324124,0.173485326766136,1.21786191324856,0.230615497256059,0,0.352766121407114,0.376999773989026,1.73036477414062,0.578397427679647,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,0,0.292780797011547,0.41889341362691,0.510914110417183,21.6865375355716,18.5969846607956,21.3477981482749,0.299581278809645,1.37250180845588,0.879580464790051,0.695297280769106,0,0.41557608911912,0.324482526135515,0.509196819251581,0.746441823660558,1.0108910337347,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.384341160854549,0.374806898238915,0.258703370739016,0.862271971731369,0.189106080167819,0,0.219195732427575,1.11218899690239,0.348252166522167,0.205782136407943,0,22.4708219940235,25.2200948972421,14.7765019685708,1.24275463521301,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.648550476366846,0.730999937126662,0.219550115291051,0.805238512562231,0.630869845692382,0.205809224758569,0.991256348951394,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,1.70701110857774,0.114248512609729,1.1270773567308,0,0,0,0.126473074248515,0.295220295959204,0,0,0,0,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.757736633841335,0.179397413521912,0.482443521363367,1.66277871149944,0,0.977789858652155,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,1.26108115284953,0.221464689648775,0.956728611944923,2.45794972073607,1.03610989119537,0.867894351489069,3.01582567878545,1.08781136763742,0,0.551873492609465,0.160550589987792,0.117211686592203,0.819674726883377,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,0.445597348164788,2.54768877709949,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.709700426041343,0.35613120733451,0.162886959353576,0.494910368917606,0,0.485561272309963,0,1.13163047853539,0,0.614870295887855,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0,0,0.329098041204242,1.522324745573,2.11204537257339,0.847328283455281,1.10264199027481,1.81374878235628,0.484393280087717,0.603129249281559,0.238744688006273,0.492422699235184,0,0.556275906031529,0.683483523191411,0.206386867963223,0.555583582109135,0.565105371014073,1.0935538217682,0.457556346413045,21.5872606092196,26.7307273938187,18.1041965683795,0,0,0,0.216010681643603,0.836353184057875,0.436725127492355,0.269728692769641,0.495920734352016,0,0.777689839750757,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0,0.632022241256357,0.810900861160657,0.410843828659309,0.51968329191118,1.61124026100733,1.19208812868759,0.600977247599844,1.32920574457119,1.11063094942962,0.15241361331,1.20991422164209,1.07203668813728,0.769694733122636,1.98690733708667,0.453460767230423,0.221985953374065,0.448569283047378,1.34307693091263,1.73870634628971,1.12609485270709,0.73260649706906,0.643105137237198,1.00314420807073,1.6942555278512,0,2.29158205375759,0.68741272937475,2.74033007908257,0,0,0.900642406448441,0,1.55328093525546,0,0.399024873401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| ||
|short_description=p@chr8:87500597..87500641,+ | |short_description=p@chr8:87500597..87500641,+ | ||
}} | }} |
Latest revision as of 06:36, 4 August 2015
Short description: | p@chr8:87500597..87500641, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87500597..87500641, + |
Coexpression cluster: | MCL_coexpression_mm9:231 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.08e-26 | 46 |
musculoskeletal system | 1.52e-13 | 32 |
unilaminar epithelium | 3.12e-10 | 66 |
hematopoietic system | 8.13e-10 | 45 |
blood island | 8.13e-10 | 45 |
bone marrow | 1.05e-09 | 16 |
hemolymphoid system | 1.48e-09 | 48 |
immune system | 1.48e-09 | 48 |
bone element | 2.91e-09 | 22 |
skeletal element | 2.91e-09 | 22 |
skeletal system | 2.91e-09 | 22 |
dense mesenchyme tissue | 8.41e-08 | 11 |
paraxial mesoderm | 8.41e-08 | 11 |
presumptive paraxial mesoderm | 8.41e-08 | 11 |
simple columnar epithelium | 1.55e-07 | 11 |
lateral plate mesoderm | 8.76e-07 | 87 |