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FFCP PHASE1:Mm9::chr5:121459539..121459586,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19894
|EntrezGene=19894
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P47708
|UniProt=P47708
|association_with_transcript=-12bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end
|association_with_transcript=-12bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end
|cluster_id=chr5:121459539..121459586,-
|description=CAGE_peak_1_at_Rph3a_5end
|description=CAGE_peak_1_at_Rph3a_5end
|id=chr5:121459539..121459586,-
|id=chr5:121459539..121459586,-
|ontology_enrichment_celltype=CL:0000117!1.76e-16!23;CL:0000337!1.76e-16!23;CL:0000540!7.57e-12!33;CL:0000047!7.57e-12!33;CL:0000031!7.57e-12!33;CL:0000404!7.57e-12!33;CL:0000221!7.74e-09!44;CL:0000133!7.74e-09!44;CL:0002319!1.93e-08!43;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39
|ontology_enrichment_celltype=CL:0000117!1.76e-16!23;CL:0000337!1.76e-16!23;CL:0000540!7.57e-12!33;CL:0000047!7.57e-12!33;CL:0000031!7.57e-12!33;CL:0000404!7.57e-12!33;CL:0000221!7.74e-09!44;CL:0000133!7.74e-09!44;CL:0002319!1.93e-08!43;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-19,23;CL:0000337,1.60e-19,23;CL:0000540,3.43e-12,33;CL:0000047,3.43e-12,33;CL:0000031,3.43e-12,33;CL:0000404,3.43e-12,33;CL:0000393,4.71e-09,39;CL:0000211,4.71e-09,39;CL:0000221,6.31e-08,44;CL:0000133,6.31e-08,44;CL:0002319,1.69e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.87e-32!71;UBERON:0003075!2.87e-32!71;UBERON:0007284!2.87e-32!71;UBERON:0000033!2.41e-31!63;UBERON:0001049!3.28e-29!52;UBERON:0005068!3.28e-29!52;UBERON:0006241!3.28e-29!52;UBERON:0007135!3.28e-29!52;UBERON:0004121!3.29e-29!102;UBERON:0000924!3.29e-29!102;UBERON:0006601!3.29e-29!102;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!2.59e-28!73;UBERON:0005743!2.59e-28!73;UBERON:0000955!6.66e-28!50;UBERON:0006238!6.66e-28!50;UBERON:0002616!2.70e-27!49;UBERON:0003056!1.12e-26!49;UBERON:0003080!8.49e-23!40;UBERON:0002780!6.57e-22!39;UBERON:0001890!6.57e-22!39;UBERON:0006240!6.57e-22!39;UBERON:0002020!3.89e-21!34;UBERON:0002791!1.27e-17!29;UBERON:0003528!1.27e-17!29;UBERON:0001893!1.27e-17!29;UBERON:0007811!1.57e-16!86;UBERON:0000153!2.93e-13!94;UBERON:0000956!7.03e-12!21;UBERON:0001869!7.03e-12!21;UBERON:0000203!7.03e-12!21;UBERON:0002619!8.75e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10;UBERON:0002420!4.61e-07!8;UBERON:0007245!4.61e-07!8;UBERON:0010009!4.61e-07!8;UBERON:0010011!4.61e-07!8;UBERON:0000454!4.61e-07!8;UBERON:0003076!7.29e-07!12;UBERON:0003057!7.29e-07!12
|ontology_enrichment_uberon=UBERON:0002346!2.87e-32!71;UBERON:0003075!2.87e-32!71;UBERON:0007284!2.87e-32!71;UBERON:0000033!2.41e-31!63;UBERON:0001049!3.28e-29!52;UBERON:0005068!3.28e-29!52;UBERON:0006241!3.28e-29!52;UBERON:0007135!3.28e-29!52;UBERON:0004121!3.29e-29!102;UBERON:0000924!3.29e-29!102;UBERON:0006601!3.29e-29!102;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!2.59e-28!73;UBERON:0005743!2.59e-28!73;UBERON:0000955!6.66e-28!50;UBERON:0006238!6.66e-28!50;UBERON:0002616!2.70e-27!49;UBERON:0003056!1.12e-26!49;UBERON:0003080!8.49e-23!40;UBERON:0002780!6.57e-22!39;UBERON:0001890!6.57e-22!39;UBERON:0006240!6.57e-22!39;UBERON:0002020!3.89e-21!34;UBERON:0002791!1.27e-17!29;UBERON:0003528!1.27e-17!29;UBERON:0001893!1.27e-17!29;UBERON:0007811!1.57e-16!86;UBERON:0000153!2.93e-13!94;UBERON:0000956!7.03e-12!21;UBERON:0001869!7.03e-12!21;UBERON:0000203!7.03e-12!21;UBERON:0002619!8.75e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10;UBERON:0002420!4.61e-07!8;UBERON:0007245!4.61e-07!8;UBERON:0010009!4.61e-07!8;UBERON:0010011!4.61e-07!8;UBERON:0000454!4.61e-07!8;UBERON:0003076!7.29e-07!12;UBERON:0003057!7.29e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-35,64;UBERON:0003075,1.13e-35,64;UBERON:0007284,1.13e-35,64;UBERON:0000073,1.76e-35,54;UBERON:0001049,3.22e-33,52;UBERON:0005068,3.22e-33,52;UBERON:0006241,3.22e-33,52;UBERON:0007135,3.22e-33,52;UBERON:0010371,1.66e-31,73;UBERON:0003056,4.88e-30,49;UBERON:0001017,7.24e-30,73;UBERON:0004121,1.44e-28,95;UBERON:0000924,1.44e-28,95;UBERON:0006601,1.44e-28,95;UBERON:0001016,1.58e-28,75;UBERON:0000955,2.62e-28,47;UBERON:0006238,2.62e-28,47;UBERON:0002616,1.34e-27,46;UBERON:0002020,1.77e-25,34;UBERON:0003080,3.38e-25,40;UBERON:0002780,3.79e-24,39;UBERON:0001890,3.79e-24,39;UBERON:0006240,3.79e-24,39;UBERON:0010314,2.30e-23,92;UBERON:0003528,3.09e-21,29;UBERON:0002791,3.09e-21,29;UBERON:0001893,3.09e-21,29;UBERON:0000956,2.70e-14,21;UBERON:0001869,2.70e-14,21;UBERON:0000203,2.70e-14,21;UBERON:0002619,9.02e-12,17;UBERON:0002021,1.42e-10,10;UBERON:0000411,1.42e-10,10;UBERON:0001950,1.42e-10,10;UBERON:0003076,3.01e-08,12;UBERON:0003057,3.01e-08,12;UBERON:0002420,3.46e-08,8;UBERON:0007245,3.46e-08,8;UBERON:0010009,3.46e-08,8;UBERON:0010011,3.46e-08,8;UBERON:0000454,3.46e-08,8
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9714181036102,25.9205579843296,17.1134478946668,0,0,0,0,0,0,0.384218305321555,4.97710139080693,5.67024940993101,4.6271491497304,55.7019419587417,51.9041071236292,12.4940615199253,12.555756703389,22.9804696652505,117.823992669346,120.409159814332,149.151943791812,17.013331117195,18.5719916512892,25.5247551572812,142.662512489706,78.2240027944035,98.0964750727121,40.0694876244188,40.148813985347,16.4031512326265,0.681535739998656,0.226714680320357,0,0,0,0,0,0,3.37066608316204,0,0,0,4.92951969218382,0,0,0,0,0,0,2.51204535381932,0,2.9688427812965,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,0.587943535678524,1.88499886994513,0,0.144599356919912,0,0,0,0,0,95.4465398257644,126.505810915327,0,0,0,0,104.104494386352,48.4950638987744,27.1413400563787,87.9551060172919,67.5088807352073,90.5955874279682,68.6280542776615,0,0,0,6.31325567659422,0,4.82794419310293,9.00310649026746,12.0563854268572,15.6483948048054,12.5551445879153,12.3686276418842,20.4375662883822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.1384343120588,10.5991750750663,0,0.264450566663544,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,1.50801125280162,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.779935708915,130.573818863714,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,1.07168517515796,3.90148514013002,8.20496560969525,6.91105886528908,11.8741330154694,0,0,0,0,0,0,0,0,0.874442509889552,177.452014024058,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9104324190896,66.2868340570335,53.8521782633033,57.5708160851353,95.9115527678899,90.6472676867641,78.3026100268895,75.653962141669,92.4410514327777,103.552062350364,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,3.14419743941973,5.69914876195044,2.889207461421,4.32673620201678,1.28367683836726,3.03236654116557,5.0695859978048,4.33840585187975,3.37109426891577,2.56100609619477,2.92920891673628,1.90517476513229,2.31768651889711,2.89363830695558,0.412085900803307,3.97437084362873,3.77156177623957,2.66213709239006,4.05341522910446,2.47088908274958,2.4468438907986,2.70766745253365,3.29270351170991,3.6829759601298,3.80251518768413,5.61142271657738,3.2031454893527,2.85662998889134,2.04615521584845,2.63392630016142,3.2794123866794,6.24526444844865,2.10538447600868,2.79332370262788,3.06061331310149,1.76473135295612,2.08681052058379
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9714181036102,25.9205579843296,17.1134478946668,0,0,0,0,0,0,0.384218305321555,4.97710139080693,5.67024940993101,4.6271491497304,55.7019419587417,51.9041071236292,12.4940615199253,12.555756703389,22.9804696652505,117.823992669346,120.409159814332,149.151943791812,17.013331117195,18.5719916512892,25.5247551572812,142.662512489706,78.2240027944035,98.0964750727121,40.0694876244188,40.148813985347,16.4031512326265,0.681535739998656,0.226714680320357,0,0,0,0,0,0,3.37066608316204,0,0,0,4.92951969218382,0,0,0,0,0,0,2.51204535381932,0,2.9688427812965,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,0.587943535678524,1.88499886994513,0,0.144599356919912,0,0,0,0,0,95.4465398257644,126.505810915327,0,0,0,0,104.104494386352,48.4950638987744,27.1413400563787,87.9551060172919,67.5088807352073,90.5955874279682,68.6280542776615,0,0,0,6.31325567659422,0,4.82794419310293,9.00310649026746,12.0563854268572,15.6483948048054,12.5551445879153,12.3686276418842,20.4375662883822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.1384343120588,10.5991750750663,0,0.264450566663544,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,1.50801125280162,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.779935708915,130.573818863714,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,1.07168517515796,3.90148514013002,8.20496560969525,6.91105886528908,11.8741330154694,0,0,0,0,0,0,0,0,0.874442509889552,177.452014024058,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9104324190896,66.2868340570335,53.8521782633033,57.5708160851353,95.9115527678899,90.6472676867641,78.3026100268895,75.653962141669,92.4410514327777,103.552062350364,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,3.14419743941973,5.69914876195044,2.889207461421,4.32673620201678,1.28367683836726,3.03236654116557,5.0695859978048,4.33840585187975,3.37109426891577,2.56100609619477,2.92920891673628,1.90517476513229,2.31768651889711,2.89363830695558,0.412085900803307,3.97437084362873,3.77156177623957,2.66213709239006,4.05341522910446,2.47088908274958,2.4468438907986,2.70766745253365,3.29270351170991,3.6829759601298,3.80251518768413,5.61142271657738,3.2031454893527,2.85662998889134,2.04615521584845,2.63392630016142,3.2794123866794,6.24526444844865,2.10538447600868,2.79332370262788,3.06061331310149,1.76473135295612,2.08681052058379
|short_description=p1@Rph3a
|short_description=p1@Rph3a
}}
}}

Latest revision as of 19:18, 1 October 2015

Short description:p1@Rph3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rph3a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -12bp_to_ENSMUST00000079204, NM_011286, uc008zil.1_5end
EntrezGene:Rph3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rph3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C314.97
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F155.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3117.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3120.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7149.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4142.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E578.22
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I698.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.15
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B295.45
cerebellum, neonate N30.CNhs11135.1395-42I2126.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4104.10
corpus striatum, adult.CNhs10487.19-21D848.50
corpus striatum, neonate N00.CNhs11226.630-43F127.14
cortex, adult.CNhs10473.12-14D587.96
cortex, neonate N30.CNhs11107.1392-42F267.51
diencephalon, adult.CNhs10482.20-12F290.60
diencephalon, neonate N30.CNhs11201.1388-42B268.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C615.65
eyeball, neonate N01.CNhs11140.1532-43E712.56
eyeball, neonate N02.CNhs11205.1551-44G812.37
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E864.14
hippocampus, neonate N00.CNhs11228.627-43G110.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2145.78
medulla oblongata, neonate N30.CNhs11200.1396-42A3130.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C9177.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A266.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.85
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A495.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A590.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A678.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A775.65
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A892.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9103.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.60e-1923
neuroblast (sensu Vertebrata)1.60e-1923
neuron3.43e-1233
neuronal stem cell3.43e-1233
neuroblast3.43e-1233
electrically signaling cell3.43e-1233
electrically responsive cell4.71e-0939
electrically active cell4.71e-0939
ectodermal cell6.31e-0844
neurectodermal cell6.31e-0844
neural cell1.69e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm1.13e-3564
neural plate1.13e-3564
presumptive neural plate1.13e-3564
regional part of nervous system1.76e-3554
neural tube3.22e-3352
neural rod3.22e-3352
future spinal cord3.22e-3352
neural keel3.22e-3352
ecto-epithelium1.66e-3173
pre-chordal neural plate4.88e-3049
central nervous system7.24e-3073
ectoderm-derived structure1.44e-2895
ectoderm1.44e-2895
presumptive ectoderm1.44e-2895
nervous system1.58e-2875
brain2.62e-2847
future brain2.62e-2847
regional part of brain1.34e-2746
gray matter1.77e-2534
anterior neural tube3.38e-2540
regional part of forebrain3.79e-2439
forebrain3.79e-2439
future forebrain3.79e-2439
structure with developmental contribution from neural crest2.30e-2392
brain grey matter3.09e-2129
regional part of telencephalon3.09e-2129
telencephalon3.09e-2129
cerebral cortex2.70e-1421
cerebral hemisphere2.70e-1421
pallium2.70e-1421
regional part of cerebral cortex9.02e-1217
occipital lobe1.42e-1010
visual cortex1.42e-1010
neocortex1.42e-1010
posterior neural tube3.01e-0812
chordal neural plate3.01e-0812
basal ganglion3.46e-088
nuclear complex of neuraxis3.46e-088
aggregate regional part of brain3.46e-088
collection of basal ganglia3.46e-088
cerebral subcortex3.46e-088
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