FFCP PHASE1:Mm9::chr2:102499011..102499029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20511 | |EntrezGene=20511 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=P43006,Q3UYK6 | |UniProt=P43006,Q3UYK6 | ||
|association_with_transcript=171bp_to_NM_001077514,uc008lid.2_5end | |association_with_transcript=171bp_to_NM_001077514,uc008lid.2_5end | ||
|cluster_id=chr2:102499011..102499029,+ | |||
|description=CAGE_peak_5_at_Slc1a2_5end | |description=CAGE_peak_5_at_Slc1a2_5end | ||
|id=chr2:102499011..102499029,+ | |id=chr2:102499011..102499029,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.02e-16!44;CL:0000133!2.02e-16!44;CL:0002319!3.00e-16!43;CL:0000540!2.41e-14!33;CL:0000047!2.41e-14!33;CL:0000031!2.41e-14!33;CL:0000404!2.41e-14!33;CL:0000117!9.60e-14!23;CL:0000337!9.60e-14!23;CL:0000055!1.62e-11!50;CL:0000393!5.61e-10!39;CL:0000211!5.61e-10!39 | |ontology_enrichment_celltype=CL:0000221!2.02e-16!44;CL:0000133!2.02e-16!44;CL:0002319!3.00e-16!43;CL:0000540!2.41e-14!33;CL:0000047!2.41e-14!33;CL:0000031!2.41e-14!33;CL:0000404!2.41e-14!33;CL:0000117!9.60e-14!23;CL:0000337!9.60e-14!23;CL:0000055!1.62e-11!50;CL:0000393!5.61e-10!39;CL:0000211!5.61e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-20,23;CL:0000337,4.68e-20,23;CL:0002319,6.50e-18,43;CL:0000221,2.89e-17,44;CL:0000133,2.89e-17,44;CL:0000540,2.11e-15,33;CL:0000047,2.11e-15,33;CL:0000031,2.11e-15,33;CL:0000404,2.11e-15,33;CL:0000393,9.05e-12,39;CL:0000211,9.05e-12,39;CL:0002321,2.82e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-33!73;UBERON:0005743!2.64e-33!73;UBERON:0000073!7.21e-33!75;UBERON:0001016!7.21e-33!75;UBERON:0004121!3.26e-28!102;UBERON:0000924!3.26e-28!102;UBERON:0006601!3.26e-28!102;UBERON:0000033!1.60e-26!63;UBERON:0002346!1.76e-25!71;UBERON:0003075!1.76e-25!71;UBERON:0007284!1.76e-25!71;UBERON:0001049!6.36e-25!52;UBERON:0005068!6.36e-25!52;UBERON:0006241!6.36e-25!52;UBERON:0007135!6.36e-25!52;UBERON:0000955!1.31e-23!50;UBERON:0006238!1.31e-23!50;UBERON:0002616!6.14e-23!49;UBERON:0002020!1.29e-22!34;UBERON:0003056!1.54e-21!49;UBERON:0002791!2.54e-19!29;UBERON:0003528!2.54e-19!29;UBERON:0001893!2.54e-19!29;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.87e-18!39;UBERON:0001890!5.87e-18!39;UBERON:0006240!5.87e-18!39;UBERON:0000956!2.78e-14!21;UBERON:0001869!2.78e-14!21;UBERON:0000203!2.78e-14!21;UBERON:0002619!7.06e-13!17;UBERON:0007811!2.50e-12!86;UBERON:0000153!2.22e-11!94;UBERON:0002021!2.95e-09!10;UBERON:0000411!2.95e-09!10;UBERON:0001950!2.95e-09!10;UBERON:0003076!7.67e-07!12;UBERON:0003057!7.67e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.64e-33!73;UBERON:0005743!2.64e-33!73;UBERON:0000073!7.21e-33!75;UBERON:0001016!7.21e-33!75;UBERON:0004121!3.26e-28!102;UBERON:0000924!3.26e-28!102;UBERON:0006601!3.26e-28!102;UBERON:0000033!1.60e-26!63;UBERON:0002346!1.76e-25!71;UBERON:0003075!1.76e-25!71;UBERON:0007284!1.76e-25!71;UBERON:0001049!6.36e-25!52;UBERON:0005068!6.36e-25!52;UBERON:0006241!6.36e-25!52;UBERON:0007135!6.36e-25!52;UBERON:0000955!1.31e-23!50;UBERON:0006238!1.31e-23!50;UBERON:0002616!6.14e-23!49;UBERON:0002020!1.29e-22!34;UBERON:0003056!1.54e-21!49;UBERON:0002791!2.54e-19!29;UBERON:0003528!2.54e-19!29;UBERON:0001893!2.54e-19!29;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.87e-18!39;UBERON:0001890!5.87e-18!39;UBERON:0006240!5.87e-18!39;UBERON:0000956!2.78e-14!21;UBERON:0001869!2.78e-14!21;UBERON:0000203!2.78e-14!21;UBERON:0002619!7.06e-13!17;UBERON:0007811!2.50e-12!86;UBERON:0000153!2.22e-11!94;UBERON:0002021!2.95e-09!10;UBERON:0000411!2.95e-09!10;UBERON:0001950!2.95e-09!10;UBERON:0003076!7.67e-07!12;UBERON:0003057!7.67e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-39,73;UBERON:0001016,9.06e-38,75;UBERON:0000073,4.73e-35,54;UBERON:0002346,8.40e-34,64;UBERON:0003075,8.40e-34,64;UBERON:0007284,8.40e-34,64;UBERON:0002020,1.44e-33,34;UBERON:0001049,6.86e-33,52;UBERON:0005068,6.86e-33,52;UBERON:0006241,6.86e-33,52;UBERON:0007135,6.86e-33,52;UBERON:0004121,3.84e-32,95;UBERON:0000924,3.84e-32,95;UBERON:0006601,3.84e-32,95;UBERON:0010371,5.66e-29,73;UBERON:0003528,1.52e-28,29;UBERON:0002791,1.52e-28,29;UBERON:0001893,1.52e-28,29;UBERON:0000955,1.01e-27,47;UBERON:0006238,1.01e-27,47;UBERON:0002616,9.28e-27,46;UBERON:0003056,1.48e-23,49;UBERON:0003080,3.70e-23,40;UBERON:0002780,3.84e-22,39;UBERON:0001890,3.84e-22,39;UBERON:0006240,3.84e-22,39;UBERON:0000956,7.11e-21,21;UBERON:0001869,7.11e-21,21;UBERON:0000203,7.11e-21,21;UBERON:0010314,1.71e-19,92;UBERON:0002619,9.73e-19,17;UBERON:0002021,3.05e-13,10;UBERON:0000411,3.05e-13,10;UBERON:0001950,3.05e-13,10;UBERON:0003076,5.13e-10,12;UBERON:0003057,5.13e-10,12;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0000025,2.00e-07,114;UBERON:0002240,4.03e-07,6;UBERON:0005174,4.03e-07,6;UBERON:0001137,4.03e-07,6;UBERON:0001954,4.78e-07,7;UBERON:0003022,4.78e-07,7;UBERON:0002421,4.78e-07,7;UBERON:0000349,4.78e-07,7;UBERON:0002600,4.78e-07,7 | |||
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| ||
|short_description=p5@Slc1a2 | |short_description=p5@Slc1a2 | ||
}} | }} |
Latest revision as of 21:15, 1 October 2015
Short description: | p5@Slc1a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc1a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 171bp_to_NM_001077514, uc008lid.2_5end |
EntrezGene: | Slc1a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.68e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-20 | 23 |
neural cell | 6.50e-18 | 43 |
ectodermal cell | 2.89e-17 | 44 |
neurectodermal cell | 2.89e-17 | 44 |
neuron | 2.11e-15 | 33 |
neuronal stem cell | 2.11e-15 | 33 |
neuroblast | 2.11e-15 | 33 |
electrically signaling cell | 2.11e-15 | 33 |
electrically responsive cell | 9.05e-12 | 39 |
electrically active cell | 9.05e-12 | 39 |
embryonic cell | 2.82e-07 | 70 |